Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012599 Carpinus fangiana HOM05D000007 ORTHO05D000521 1.9e-124 449.1 214 100.0
Haze_08061 Corylus avellana HOM05D000007 ORTHO05D000521 6.9e-79 297.7 216 69.9
Dinv34353 Davidia involucrata HOM05D000007 ORTHO05D000521 9.5e-36 154.5 228 43.4
Rhsim07G0064700 Rhododendron simsii HOM05D000007 ORTHO05D000521 9.8e-33 144.4 178 44.4
Rhsim07G0064500 Rhododendron simsii HOM05D000007 ORTHO05D000521 6.4e-32 141.7 216 41.7
Lalb_Chr17g0348371 Lupinus albus HOM05D000007 ORTHO05D000521 2.4e-31 139.8 223 39.9
Rhsim07G0064600 Rhododendron simsii HOM05D000007 ORTHO05D000521 2.4e-31 139.8 213 40.4
Rhsim01G0072600 Rhododendron simsii HOM05D000007 ORTHO05D000521 4.6e-30 135.6 210 38.6
Rhsim01G0071800 Rhododendron simsii HOM05D000007 ORTHO05D000521 6.0e-30 135.2 210 38.1
MD17G1263300 Malus domestica HOM05D000007 ORTHO05D000521 1.1e-28 131.0 211 38.9
Hma1.2p1_1251F.1_g270320 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 2.5e-28 129.8 219 38.8
CANSAT64G2453 Cannabis sativa HOM05D000007 ORTHO05D000521 5.6e-28 128.6 210 38.6
Rhsim01G0070300 Rhododendron simsii HOM05D000007 ORTHO05D000521 9.5e-28 127.9 203 38.4
Rhsim01G0070100 Rhododendron simsii HOM05D000007 ORTHO05D013865 2.8e-27 126.3 184 38.6
Hma1.2p1_0270F.1_g108160 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 3.6e-27 125.9 221 38.0
Rhsim07G0063500 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.1e-26 124.4 214 36.9
TPR.G29403 Trifolium pratense HOM05D000007 ORTHO05D000521 5.2e-26 122.1 219 39.3
RcHm_v2.0_Chr2g0131131 Rosa chinensis HOM05D000007 ORTHO05D000521 1.2e-25 120.9 212 39.6
TPR.G13023 Trifolium pratense HOM05D000007 ORTHO05D000521 5.8e-25 118.6 229 37.1
TPR.G17766 Trifolium pratense HOM05D000007 ORTHO05D000521 2.2e-24 116.7 211 36.0
TPR.G18192 Trifolium pratense HOM05D000007 ORTHO05D000521 4.9e-24 115.5 226 36.7
Prupe.3G112400 Prunus persica HOM05D000007 ORTHO05D000521 6.4e-24 115.2 209 37.8
TPR.G18189 Trifolium pratense HOM05D000007 ORTHO05D000521 8.3e-24 114.8 214 37.9
RhsimUnG0082900 Rhododendron simsii HOM05D000007 ORTHO05D013865 1.1e-23 114.4 200 35.5
Thecc.08G139900 Theobroma cacao HOM05D023714 ORTHO05D025667 2.4e-23 113.2 154 42.2
TPR.G13135 Trifolium pratense HOM05D000007 ORTHO05D000521 4.1e-23 112.5 231 36.4
Medtr5g021920 Medicago truncatula HOM05D000007 ORTHO05D000521 7.1e-23 111.7 209 36.8
Medtr6g046320 Medicago truncatula HOM05D000007 ORTHO05D000521 7.1e-23 111.7 207 40.6
TPR.G18184 Trifolium pratense HOM05D000007 ORTHO05D000521 3.5e-22 109.4 239 34.7
Dinv34341 Davidia involucrata HOM05D000007 ORTHO05D000521 4.6e-22 109.0 100 53.0
Prupe.3G111700 Prunus persica HOM05D000007 ORTHO05D000521 4.6e-22 109.0 220 33.2
MD01G1181800 Malus domestica HOM05D000007 ORTHO05D000521 6.0e-22 108.6 181 37.6
CANSAT11G1035 Cannabis sativa HOM05D000007 ORTHO05D000676 7.8e-22 108.2 171 39.2
Psat0s3499g0120 Pisum sativum HOM05D000007 ORTHO05D000521 3.0e-21 106.3 181 37.6
CANSAT64G2796 Cannabis sativa HOM05D000007 ORTHO05D000676 5.1e-21 105.5 164 38.4
Medtr5g021860 Medicago truncatula HOM05D000007 ORTHO05D000521 1.1e-20 104.4 220 35.9
Psat0s3499g0040 Pisum sativum HOM05D000007 ORTHO05D000521 1.5e-20 104.0 220 33.6
Medtr4g027370 Medicago truncatula HOM05D000007 ORTHO05D000521 7.3e-20 101.7 220 35.0
Medtr5g007940 Medicago truncatula HOM05D000007 ORTHO05D000521 7.3e-20 101.7 215 33.5
TPR.G4156 Trifolium pratense HOM05D000007 ORTHO05D000521 9.5e-20 101.3 174 35.6
TPR.G14415 Trifolium pratense HOM05D000007 ORTHO05D000521 1.2e-19 100.9 158 38.6
Medtr5g022900 Medicago truncatula HOM05D000007 ORTHO05D000521 2.1e-19 100.1 221 33.9
Medtr5g021880 Medicago truncatula HOM05D000007 ORTHO05D000521 4.7e-19 99.0 218 35.8
Cfa010369 Carpinus fangiana HOM05D000007 ORTHO05D000521 6.2e-19 98.6 179 35.2
CiPaw.13G053300 Carya illinoinensis HOM05D000007 ORTHO05D000521 1.4e-18 97.4 169 33.7
Medtr5g022040 Medicago truncatula HOM05D000007 ORTHO05D000521 1.4e-18 97.4 230 30.4
Rhsim07G0064300 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.8e-18 97.1 208 34.6
Medtr5g010610 Medicago truncatula HOM05D000007 ORTHO05D000521 4.0e-18 95.9 201 35.3
Medtr5g010550 Medicago truncatula HOM05D000007 ORTHO05D000521 6.8e-18 95.1 181 35.9
CANSAT64G1494 Cannabis sativa HOM05D000007 ORTHO05D000521 1.2e-17 94.4 223 30.5
Medtr0627s0010 Medicago truncatula HOM05D000007 ORTHO05D000521 1.2e-17 94.4 205 34.1
Medtr5g010560 Medicago truncatula HOM05D000007 ORTHO05D000521 1.2e-17 94.4 159 39.6
Rhsim07G0063800 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.2e-17 94.4 209 34.9
Rhsim07G0064100 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.2e-17 94.4 199 36.7
Rhsim07G0064200 Rhododendron simsii HOM05D000007 ORTHO05D000521 1.2e-17 94.4 204 33.8
Medtr5g027370 Medicago truncatula HOM05D000007 ORTHO05D000521 3.4e-17 92.8 205 33.7
Medtr5g027330 Medicago truncatula HOM05D000007 ORTHO05D000521 4.4e-17 92.4 181 34.8
Haze_03323 Corylus avellana HOM05D000007 ORTHO05D000521 5.8e-17 92.0 175 34.3
TPR.G34402 Trifolium pratense HOM05D000007 ORTHO05D000521 5.8e-17 92.0 217 30.9
FvH4_6g28330 Fragaria vesca HOM05D000007 ORTHO05D000676 1.3e-16 90.9 222 31.5
FAN02G0113 Fragaria x ananassa HOM05D000007 ORTHO05D000521 1.7e-16 90.5 222 31.1
Medtr5g022090 Medicago truncatula HOM05D000007 ORTHO05D000521 2.9e-16 89.7 201 29.9
Psat2g140960 Pisum sativum HOM05D000007 ORTHO05D000521 6.4e-16 88.6 208 31.2
Ca_24912_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000521 1.4e-15 87.4 213 32.9
Ca_24932_v3 Cicer arietinum L. HOM05D000007 ORTHO05D000521 1.4e-15 87.4 213 32.9
TPR.G13072 Trifolium pratense HOM05D000007 ORTHO05D000521 3.2e-15 86.3 289 27.7
Medtr5g010660 Medicago truncatula HOM05D000007 ORTHO05D000521 1.2e-14 84.3 200 32.5
Oeu031731.1 Olea europaea HOM05D000007 ORTHO05D013865 6.0e-14 82.0 144 36.1
RhsimUnG0082800 Rhododendron simsii HOM05D000007 ORTHO05D000521 7.8e-14 81.6 89 43.8
TPR.G33734 Trifolium pratense HOM05D000007 ORTHO05D000521 3.9e-13 79.3 161 37.3
Lalb_Chr03g0040301 Lupinus albus HOM05D000007 ORTHO05D000521 1.1e-12 77.8 172 27.9
Lalb_Chr03g0040311 Lupinus albus HOM05D000007 ORTHO05D000521 1.1e-12 77.8 172 27.9
QL06p035449 Quercus lobata HOM05D000007 ORTHO05D000521 1.5e-12 77.4 170 31.8
Medtr5g022045 Medicago truncatula HOM05D000007 ORTHO05D000521 1.9e-12 77.0 202 32.2
Prupe.3G112000 Prunus persica HOM05D000007 ORTHO05D000521 1.9e-12 77.0 191 29.8
Prupe.3G112200 Prunus persica HOM05D000007 ORTHO05D000521 2.5e-12 76.6 193 31.1
Rhsim04G0041100 Rhododendron simsii HOM05D000007 ORTHO05D000521 5.6e-12 75.5 209 26.8
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 7.3e-12 75.1 168 31.0
Cfa014273 Carpinus fangiana HOM05D000007 ORTHO05D000521 9.6e-12 74.7 175 26.3
Ciclev10011634m.g Citrus clementina HOM05D000007 ORTHO05D000521 1.6e-11 73.9 173 29.5
Oeu000695.1 Olea europaea HOM05D000007 ORTHO05D013865 1.6e-11 73.9 155 34.2
Prupe.1G147000 Prunus persica HOM05D000007 ORTHO05D000521 3.6e-11 72.8 175 27.4
Cpa.g.sc483.2 Carica papaya HOM05D000007 ORTHO05D000521 1.8e-10 70.5 168 28.0
Haze_08062 Corylus avellana HOM05D000007 ORTHO05D000521 2.4e-10 70.1 38 81.6
COL.COLO4_23194 Corchorus olitorius HOM05D000007 ORTHO05D000521 4.0e-10 69.3 201 27.9
MD13G1178100 Malus domestica HOM05D000007 ORTHO05D000521 4.0e-10 69.3 171 25.1
Hma1.2p1_0106F.1_g050940 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 5.2e-10 68.9 210 28.6
Rhsim01G0072000 Rhododendron simsii HOM05D000007 ORTHO05D013865 5.2e-10 68.9 108 35.2
Aqoxy3G04127 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 6.9e-10 68.6 201 27.9
TPR.G37785 Trifolium pratense HOM05D000007 ORTHO05D000521 6.9e-10 68.6 137 33.6
RcHm_v2.0_Chr4g0419911 Rosa chinensis HOM05D000007 ORTHO05D000521 1.2e-09 67.8 206 26.7
COL.COLO4_23193 Corchorus olitorius HOM05D000007 ORTHO05D000521 2.0e-09 67.0 168 26.8
Dinv05848 Davidia involucrata HOM05D000007 ORTHO05D000521 2.0e-09 67.0 169 29.0
arahy.Tifrunner.gnm1.ann1.LKSH62 Arachis hypogaea HOM05D000007 ORTHO05D000017 2.6e-09 66.6 163 29.4
COL.COLO4_13966 Corchorus olitorius HOM05D000007 ORTHO05D000521 2.6e-09 66.6 200 27.5
FvH4_1g29150 Fragaria vesca HOM05D000007 ORTHO05D000521 2.6e-09 66.6 169 25.4
COL.COLO4_13967 Corchorus olitorius HOM05D000007 ORTHO05D000521 4.4e-09 65.9 168 25.6
CSS0009149 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 7.6e-09 65.1 203 29.1
Lj8A117T66 Lonicera japonica HOM05D000007 ORTHO05D000521 7.6e-09 65.1 191 30.9
Hma1.2p1_1251F.1_g270330 Hydrangea macrophylla HOM05D000007 ORTHO05D000521 9.9e-09 64.7 67 50.7
RcHm_v2.0_Chr4g0395601 Rosa chinensis HOM05D000007 ORTHO05D000521 9.9e-09 64.7 172 25.6
Actinidia10779 Actinidia chinensis HOM05D000007 ORTHO05D000521 1.3e-08 64.3 196 30.1
Aqoxy4G00563 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 1.3e-08 64.3 188 26.6
FvH4_3g36372 Fragaria vesca HOM05D024241 ORTHO05D000521 1.3e-08 64.3 165 27.3
Atru.chr4.13 Acer truncatum HOM05D000007 ORTHO05D000521 1.7e-08 63.9 205 27.3
Aqoxy3G01256 Aquilegia oxysepala HOM05D000007 ORTHO05D000521 1.7e-08 63.9 182 28.6
Prupe.3G110500 Prunus persica HOM05D000007 ORTHO05D029697 1.7e-08 63.9 74 47.3
TPR.G30748 Trifolium pratense HOM05D000007 ORTHO05D000521 1.7e-08 63.9 91 35.2
HanXRQChr01g0010851 Helianthus annuus HOM05D000007 ORTHO05D000521 2.2e-08 63.5 171 31.0
Manes.05G124500 Manihot esculenta HOM05D000007 ORTHO05D000521 2.2e-08 63.5 184 27.2
Medtr7g117100 Medicago truncatula HOM05D000007 ORTHO05D000521 2.2e-08 63.5 81 39.5
arahy.Tifrunner.gnm1.ann1.FVM0T0 Arachis hypogaea HOM05D002066 ORTHO05D000521 2.9e-08 63.2 159 30.8
Potri.008G216000 Populus trichocarpa HOM05D000007 ORTHO05D000521 2.9e-08 63.2 164 29.3
Prupe.1G147200 Prunus persica HOM05D000007 ORTHO05D000521 2.9e-08 63.2 167 24.6
RcHm_v2.0_Chr4g0395621 Rosa chinensis HOM05D000007 ORTHO05D000521 2.9e-08 63.2 167 29.9
vmacro12514 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 2.9e-08 63.2 168 28.0
Potri.008G215800 Populus trichocarpa HOM05D000007 ORTHO05D000521 3.8e-08 62.8 164 29.3
Rhsim04G0042000 Rhododendron simsii HOM05D000007 ORTHO05D000521 3.8e-08 62.8 163 23.3
Rhsim04G0042700 Rhododendron simsii HOM05D000007 ORTHO05D000521 3.8e-08 62.8 163 23.3
Prupe.1G146900 Prunus persica HOM05D000007 ORTHO05D000521 6.4e-08 62.0 182 27.5
TWI18G1348 Tripterygium wilfordii HOM05D000007 ORTHO05D000521 8.4e-08 61.6 194 25.3
MD13G1177900 Malus domestica HOM05D000007 ORTHO05D000521 1.4e-07 60.8 211 25.6
Potri.008G215901 Populus trichocarpa HOM05D000007 ORTHO05D000521 1.4e-07 60.8 164 28.7
Ah.13g072840 Amaranthus hybridus HOM05D000007 ORTHO05D000521 1.9e-07 60.5 172 27.3
Ah.13g072850 Amaranthus hybridus HOM05D000007 ORTHO05D000676 1.9e-07 60.5 172 27.3
COL.COLO4_15974 Corchorus olitorius HOM05D000007 ORTHO05D000521 1.9e-07 60.5 168 28.0
Potri.011G037200 Populus trichocarpa HOM05D000007 ORTHO05D000521 1.9e-07 60.5 194 24.7
vmacro09383 Vaccinium macrocarpon HOM05D000007 ORTHO05D000521 1.9e-07 60.5 172 26.7
Potri.004G000900 Populus trichocarpa HOM05D000007 ORTHO05D000521 2.4e-07 60.1 171 29.2
Sabra16G0260400 Salix brachista HOM05D000007 ORTHO05D000521 2.4e-07 60.1 181 26.0
PSO017G6833 Papaver somniferum HOM05D000007 ORTHO05D000017 5.4e-07 58.9 189 24.3
COL.COLO4_15939 Corchorus olitorius HOM05D000007 ORTHO05D000521 7.1e-07 58.5 186 25.8
COL.COLO4_31026 Corchorus olitorius HOM05D000007 ORTHO05D000521 7.1e-07 58.5 199 25.1
FAN07G1149 Fragaria x ananassa HOM05D000007 ORTHO05D000521 7.1e-07 58.5 170 27.1
Lj8C5G0 Lonicera japonica HOM05D000007 ORTHO05D000521 7.1e-07 58.5 184 26.6
Potri.011G037312 Populus trichocarpa HOM05D000007 ORTHO05D000521 9.3e-07 58.2 191 25.7
Dinv20225 Davidia involucrata HOM05D000007 ORTHO05D000521 1.6e-06 57.4 174 24.7
QL10p051041 Quercus lobata HOM05D000007 ORTHO05D000521 1.6e-06 57.4 184 25.5
QL10p051055 Quercus lobata HOM05D000007 ORTHO05D000521 1.6e-06 57.4 186 24.7
FAN14G1599 Fragaria x ananassa HOM05D018771 ORTHO05D000521 2.1e-06 57.0 48 52.1
Medtr5g022750 Medicago truncatula HOM05D000007 ORTHO05D000521 2.1e-06 57.0 215 28.8
MD03G1174100 Malus domestica HOM05D000007 ORTHO05D000521 2.7e-06 56.6 155 27.1
TAR624G0469 Trochodendron aralioides HOM05D000007 ORTHO05D000521 2.7e-06 56.6 186 25.8
COL.COLO4_15938 Corchorus olitorius HOM05D000007 ORTHO05D000521 3.5e-06 56.2 199 30.2
Lj8C595T2 Lonicera japonica HOM05D000007 ORTHO05D000521 3.5e-06 56.2 169 26.0
HanXRQChr10g0295591 Helianthus annuus HOM05D000007 ORTHO05D000521 7.8e-06 55.1 80 37.5


User provided reference genes

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