Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 2.3e-80 302.4 171 100.0
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 1.5e-52 209.9 141 78.0
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 8.3e-51 204.1 174 68.4
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 9.3e-42 174.1 167 68.9
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 6.6e-40 167.9 173 68.8
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 8.7e-40 167.5 171 60.2
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 1.1e-39 167.2 173 66.5
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 1.3e-38 163.7 181 64.1
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 1.6e-38 163.3 170 59.4
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 2.8e-38 162.5 171 56.7
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 3.1e-37 159.1 168 67.3
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 6.9e-37 157.9 168 56.0
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 9.0e-37 157.5 174 55.7
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 9.0e-37 157.5 169 66.9
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 1.2e-36 157.1 169 60.4
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 2.0e-36 156.4 172 58.7
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 2.6e-36 156.0 171 57.9
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 5.8e-36 154.8 175 54.3
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 3.8e-35 152.1 169 65.1
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 3.8e-35 152.1 176 65.9
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 4.9e-35 151.8 168 57.1
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 8.4e-35 151.0 169 64.5
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.1e-34 150.6 169 64.5
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 1.9e-34 149.8 183 52.5
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 2.4e-34 149.4 174 63.8
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 4.2e-34 148.7 169 64.5
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 4.2e-34 148.7 169 64.5
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 5.4e-34 148.3 176 52.8
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 5.4e-34 148.3 169 64.5
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 7.1e-34 147.9 172 55.2
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 7.1e-34 147.9 175 55.4
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 9.3e-34 147.5 147 66.7
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 1.6e-33 146.7 171 56.7
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 3.5e-33 145.6 169 56.2
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 4.6e-33 145.2 173 56.6
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 4.6e-33 145.2 166 57.2
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 4.6e-33 145.2 169 53.3
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 1.7e-32 143.3 181 59.1
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 3.9e-32 142.1 163 63.8
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 5.1e-32 141.7 179 63.1
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 6.6e-32 141.4 167 56.3
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 6.6e-32 141.4 144 59.0
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.5e-31 140.2 184 49.5
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 1.9e-31 139.8 172 48.8
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 1.9e-31 139.8 172 48.8
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.5e-31 139.4 174 51.7
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.5e-31 139.4 174 51.7
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 3.3e-31 139.0 173 63.6
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 5.6e-31 138.3 172 58.1
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 9.6e-31 137.5 175 50.3
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 1.3e-30 137.1 174 48.9
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 1.3e-30 137.1 183 48.1
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 1.6e-30 136.7 175 52.0
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 2.1e-30 136.3 166 53.6
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 3.6e-30 135.6 177 47.5
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 3.6e-30 135.6 174 51.1
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 3.6e-30 135.6 174 51.1
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 3.6e-30 135.6 172 48.3
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 3.6e-30 135.6 175 52.0
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 1.4e-29 133.7 172 47.7
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 1.8e-29 133.3 173 50.3
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 1.8e-29 133.3 175 46.9
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.8e-29 133.3 177 50.8
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 2.4e-29 132.9 172 46.5
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 3.1e-29 132.5 182 47.3
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 5.3e-29 131.7 175 47.4
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 5.3e-29 131.7 176 50.0
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 1.2e-28 130.6 136 59.6
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 1.2e-28 130.6 175 50.9
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 1.2e-28 130.6 216 44.0
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 2.6e-28 129.4 175 46.3
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 4.5e-28 128.6 174 48.3
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 5.8e-28 128.3 173 48.0
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 5.8e-28 128.3 173 48.0
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 9.9e-28 127.5 174 47.7
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 2.2e-27 126.3 176 44.3
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 2.9e-27 125.9 193 48.2
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 3.8e-27 125.6 176 45.5
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 6.4e-27 124.8 93 87.1
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 2.4e-26 122.9 177 46.3
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 9.3e-26 120.9 249 41.4
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 3.5e-25 119.0 170 47.1
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 4.6e-25 118.6 169 46.2
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 7.9e-25 117.9 179 45.3
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 7.9e-25 117.9 168 45.2
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 7.9e-25 117.9 168 45.2
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 7.9e-25 117.9 95 65.3
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 7.9e-25 117.9 177 42.9
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 1.8e-24 116.7 172 44.8
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 5.1e-24 115.2 173 44.5
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 2.5e-23 112.8 141 50.4
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 1.8e-21 106.7 142 52.1
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 4.0e-21 105.5 167 46.1
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 9.0e-21 104.4 166 44.6
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 9.0e-21 104.4 142 51.4
MD06G1023100 Malus domestica HOM05D006875 ORTHO05D008416 1.5e-20 103.6 140 62.1
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 5.8e-20 101.7 55 90.9
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 3.8e-19 99.0 173 42.8
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 4.9e-19 98.6 147 46.9
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 6.5e-19 98.2 176 42.0
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 3.2e-18 95.9 91 56.0
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 1.3e-16 90.5 63 73.0
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 1.3e-16 90.5 130 56.9
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 3.0e-16 89.4 149 51.0
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 3.3e-15 85.9 63 71.4
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 9.6e-15 84.3 63 65.1
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 2.1e-14 83.2 63 65.1
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 4.5e-12 75.5 76 52.6
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 3.8e-11 72.4 63 58.7
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 5.5e-10 68.6 91 46.2
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 2.1e-09 66.6 66 53.0
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 6.1e-09 65.1 145 35.2
SEGI_22250 Sequoiadendron giganteum HOM05D006875 ORTHO05D008416 1.0e-08 64.3 70 48.6
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 3.7e-06 55.8 33 75.8


User provided reference genes

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