Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012552 Carpinus fangiana HOM05D005120 ORTHO05D006174 1.6e-286 988.8 525 100.0
Haze_08107 Corylus avellana HOM05D005120 ORTHO05D006174 7.5e-268 926.8 579 87.7
CiPaw.11G101100 Carya illinoinensis HOM05D005120 ORTHO05D006174 2.3e-237 825.5 529 84.3
Duzib205G1724 Durio zibethinus HOM05D005120 ORTHO05D006174 1.5e-220 769.6 539 78.3
Prupe.5G024500 Prunus persica HOM05D005120 ORTHO05D006174 5.8e-220 767.7 517 80.5
MD06G1023600 Malus domestica HOM05D005120 ORTHO05D006174 7.1e-218 760.8 525 79.4
Eucgr.E01259 Eucalyptus grandis HOM05D005120 ORTHO05D006174 1.6e-217 759.6 513 79.1
QL12p000342 Quercus lobata HOM05D005120 ORTHO05D006174 3.5e-217 758.4 450 90.0
Thecc.03G314000 Theobroma cacao HOM05D005120 ORTHO05D006174 4.6e-217 758.1 538 76.6
Lj4g0011317 Lotus japonicus HOM05D005120 ORTHO05D006174 1.0e-216 756.9 523 78.2
Potri.003G099600 Populus trichocarpa HOM05D005120 ORTHO05D006174 3.0e-216 755.4 512 79.7
Manes.17G006500 Manihot esculenta HOM05D005120 ORTHO05D006174 2.8e-214 748.8 471 84.1
CANSAT21G0750 Cannabis sativa HOM05D005120 ORTHO05D006174 3.6e-214 748.4 528 78.2
Gorai.003G186700 Gossypium raimondii HOM05D005120 ORTHO05D006174 3.8e-211 738.4 470 83.8
PGR042G0860 Punica granatum HOM05D005120 ORTHO05D006174 6.4e-211 737.6 521 76.0
Cpa.g.sc757.1 Carica papaya HOM05D005120 ORTHO05D006174 8.4e-211 737.3 513 76.6
Gohir.D03G177466 Gossypium hirsutum HOM05D005120 ORTHO05D006174 1.1e-210 736.9 470 83.6
Sabra03G0067700 Salix brachista HOM05D005120 ORTHO05D006174 1.1e-210 736.9 470 83.4
RcHm_v2.0_Chr7g0212851 Rosa chinensis HOM05D005120 ORTHO05D006174 1.4e-210 736.5 528 76.3
Gohir.A03G000018 Gossypium hirsutum HOM05D005120 ORTHO05D006174 1.9e-210 736.1 470 83.4
TWI60G0565 Tripterygium wilfordii HOM05D005120 ORTHO05D006174 1.2e-209 733.4 517 76.8
FAN08G2640 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.0e-208 730.3 531 75.1
Medtr8g070830 Medicago truncatula HOM05D005120 ORTHO05D006174 2.3e-208 729.2 525 75.0
FAN18G1216 Fragaria x ananassa HOM05D005120 ORTHO05D006174 8.7e-208 727.2 527 75.3
Rhsim11G0027600 Rhododendron simsii HOM05D005120 ORTHO05D006174 8.7e-208 727.2 541 72.8
Lalb_Chr16g0391911 Lupinus albus HOM05D005120 ORTHO05D006174 1.1e-207 726.9 471 81.7
Thhalv10007389m.g Eutrema salsugineum HOM05D005120 ORTHO05D006174 1.5e-207 726.5 460 83.5
FAN18G2593 Fragaria x ananassa HOM05D005120 ORTHO05D006174 1.5e-207 726.5 527 75.1
FvH4_5g23540 Fragaria vesca HOM05D005120 ORTHO05D006174 1.9e-207 726.1 527 75.1
FAN04G0205 Fragaria x ananassa HOM05D005120 ORTHO05D006174 3.3e-207 725.3 531 75.0
GSVIVG01029984001 Vitis vinifera HOM05D005120 ORTHO05D006174 3.3e-207 725.3 442 85.5
Sp1g27750 Schrenkiella parvula HOM05D005120 ORTHO05D006174 1.6e-206 723.0 457 83.8
CARHR031430 Cardamine hirsuta HOM05D005120 ORTHO05D006174 4.8e-206 721.5 456 83.6
THA.LOC104798500 Tarenaya hassleriana HOM05D005120 ORTHO05D006174 6.2e-206 721.1 486 79.0
MELO3C026723.2 Cucumis melo HOM05D005120 ORTHO05D006174 8.1e-206 720.7 531 74.4
Carub.0001s3040 Capsella rubella HOM05D005120 ORTHO05D006174 1.1e-205 720.3 461 82.4
Atru.chr6.1569 Acer truncatum HOM05D005120 ORTHO05D006174 1.8e-205 719.5 459 82.1
BcaB03g13768 Brassica carinata HOM05D005120 ORTHO05D006174 1.8e-205 719.5 460 82.6
COL.COLO4_16896 Corchorus olitorius HOM05D005120 ORTHO05D006174 1.8e-205 719.5 454 82.8
Nn1g01918 Nelumbo nucifera HOM05D005120 ORTHO05D006174 3.1e-205 718.8 488 78.7
BcaC05g27233 Brassica carinata HOM05D005120 ORTHO05D006174 4.0e-205 718.4 461 82.2
BcaC05g27930 Brassica carinata HOM05D005120 ORTHO05D006174 6.9e-205 717.6 460 82.2
C05p31470 Brassica napus HOM05D005120 ORTHO05D006174 6.9e-205 717.6 461 82.0
BolC5t31871H Brassica oleracea HOM05D005120 ORTHO05D006174 6.9e-205 717.6 461 82.0
CsaV3_3G030430 Cucumis sativus L. HOM05D005120 ORTHO05D006174 9.0e-205 717.2 514 76.5
BraA09t38958Z Brassica rapa HOM05D005120 ORTHO05D006174 1.5e-204 716.5 461 82.0
AT1G32080 Arabidopsis thaliana HOM05D005120 ORTHO05D006174 2.6e-204 715.7 457 83.4
AL1G46150 Arabidopsis lyrata HOM05D005120 ORTHO05D006174 3.4e-204 715.3 457 83.4
Actinidia27272 Actinidia chinensis HOM05D005120 ORTHO05D006174 1.3e-203 713.4 509 73.5
BraA05t21413Z Brassica rapa HOM05D005120 ORTHO05D006174 2.9e-203 712.2 460 81.5
Glyma.16G095100 Glycine max HOM05D005120 ORTHO05D006174 2.9e-203 712.2 526 73.8
ClCG07G002270 Citrullus lanatus HOM05D005120 ORTHO05D006174 6.5e-203 711.1 502 77.3
TAR374G0846 Trochodendron aralioides HOM05D005120 ORTHO05D006174 1.1e-202 710.3 460 82.6
TPR.G6179 Trifolium pratense HOM05D005120 ORTHO05D006174 4.2e-202 708.4 544 72.2
Psat4g111760 Pisum sativum HOM05D005120 ORTHO05D006174 5.5e-202 708.0 516 75.2
Oeu042231.1 Olea europaea HOM05D005120 ORTHO05D006174 1.6e-201 706.4 531 71.4
Cc08_g03980 Coffea canephora HOM05D005120 ORTHO05D006174 2.1e-201 706.1 469 78.5
Migut.A00586 Erythranthe guttata HOM05D005120 ORTHO05D006174 2.1e-201 706.1 522 73.2
arahy.Tifrunner.gnm1.ann1.H9FFKJ Arachis hypogaea HOM05D005120 ORTHO05D006174 2.7e-201 705.7 445 83.6
Lsat_1_v5_gn_6_17781 Lactuca sativa HOM05D005120 ORTHO05D006174 3.5e-201 705.3 469 78.7
Solyc08g076290.3 Solanum lycopersicum HOM05D005120 ORTHO05D006174 1.3e-200 703.4 445 82.2
Sopen08g024900 Solanum pennellii HOM05D005120 ORTHO05D006174 1.3e-200 703.4 445 82.2
Aa31LG2G13920 Aethionema arabicum HOM05D005120 ORTHO05D006174 5.1e-200 701.4 461 80.0
SGA_v2.0_scaffold42G16013 Striga asiatica HOM05D005120 ORTHO05D006174 1.1e-199 700.3 484 77.5
vmacro00236 Vaccinium macrocarpon HOM05D005120 ORTHO05D006174 1.1e-199 700.3 447 82.1
Nitab4.5_0000543g0120 Nicotiana tabacum HOM05D005120 ORTHO05D006174 1.5e-199 699.9 446 82.3
Phvul.003G274000 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 1.9e-199 699.5 525 72.4
Sed0003941 Sechium edule HOM05D005120 ORTHO05D006174 1.9e-199 699.5 520 74.2
BcaB07g32869 Brassica carinata HOM05D005120 ORTHO05D006174 3.3e-199 698.7 460 81.3
Dinv29029 Davidia involucrata HOM05D005120 ORTHO05D006174 4.3e-199 698.4 432 84.5
Sed0007636 Sechium edule HOM05D005120 ORTHO05D006174 2.8e-198 695.7 494 76.3
AUR62018612 Chenopodium quinoa HOM05D005120 ORTHO05D006174 6.3e-198 694.5 514 73.2
Lj8A318T44 Lonicera japonica HOM05D005120 ORTHO05D006174 6.3e-198 694.5 515 72.6
PGSC0003DMG402009291 Solanum tuberosum HOM05D005120 ORTHO05D006174 1.1e-197 693.7 436 82.8
VMungo0251G1066 Vigna mungo HOM05D005120 ORTHO05D006174 1.1e-197 693.7 525 72.0
MSTRG.11896 Avicennia marina HOM05D005120 ORTHO05D006174 1.4e-197 693.3 529 70.9
C05p39360 Brassica napus HOM05D005120 ORTHO05D006174 4.1e-197 691.8 446 81.8
BolC5t32672H Brassica oleracea HOM05D005120 ORTHO05D006174 4.1e-197 691.8 446 81.8
Aqoxy7G00879 Aquilegia oxysepala HOM05D005120 ORTHO05D006174 1.2e-196 690.3 531 71.4
arahy.Tifrunner.gnm1.ann1.PMQ83Q Arachis hypogaea HOM05D005120 ORTHO05D006174 2.6e-196 689.1 438 83.1
MBI04_g36023_MAGBIO Magnolia biondii HOM05D005120 ORTHO05D006174 4.5e-196 688.3 472 77.5
A05p25290 Brassica napus HOM05D005120 ORTHO05D006174 1.3e-195 686.8 446 81.4
SalBow1G1967 Salvia bowleyana HOM05D005120 ORTHO05D006174 2.9e-195 685.6 525 70.9
HanXRQChr02g0050021 Helianthus annuus HOM05D005120 ORTHO05D006174 1.1e-194 683.7 466 76.2
Ah.07g201110 Amaranthus hybridus HOM05D005120 ORTHO05D006174 1.4e-194 683.3 471 75.2
Nitab4.5_0006395g0010 Nicotiana tabacum HOM05D005120 ORTHO05D006174 1.9e-194 682.9 421 84.1
Sc07g0008440 Simmondsia chinensis HOM05D005120 ORTHO05D006174 2.5e-194 682.6 526 70.7
Peaxi162Scf00408g00023 Petunia axillaris HOM05D005120 ORTHO05D006174 6.7e-192 674.5 463 77.8
EL10Ac5g11981 Beta vulgaris HOM05D005120 ORTHO05D006174 1.5e-191 673.3 510 71.8
Ca_22546_v3 Cicer arietinum L. HOM05D005120 ORTHO05D006174 2.5e-191 672.5 406 85.5
Nn3g19343 Nelumbo nucifera HOM05D005120 ORTHO05D006174 3.7e-190 668.7 482 74.1
A09p34100 Brassica napus HOM05D005120 ORTHO05D006174 6.3e-190 667.9 433 81.1
Phvul.002G132800 Phaseolus vulgaris HOM05D005120 ORTHO05D006174 2.4e-189 666.0 459 76.7
SGA_v2.0_scaffold89G27426 Striga asiatica HOM05D005120 ORTHO05D006174 3.1e-189 665.6 440 80.2
Glyma.01G009900 Glycine max HOM05D005120 ORTHO05D006174 1.5e-188 663.3 457 76.6
Aa31LG2G11060 Aethionema arabicum HOM05D005120 ORTHO05D006174 4.5e-188 661.8 443 79.7
CAN.G773.16 Capsicum annuum HOM05D005120 ORTHO05D006174 5.9e-188 661.4 434 81.1
Hund14388 Selenicereus undatus HOM05D005120 ORTHO05D006174 1.3e-187 660.2 464 74.6
AUR62007376 Chenopodium quinoa HOM05D005120 ORTHO05D006174 5.0e-187 658.3 405 84.0
Glyma.09G211200 Glycine max HOM05D005120 ORTHO05D006174 7.2e-186 654.4 457 75.9
ECA233G2235 Erigeron canadensis HOM05D005120 ORTHO05D006174 1.2e-185 653.7 432 79.6
CDE06G0533 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 4.6e-185 651.7 460 75.0
Os01g0511600 Oryza sativa ssp. japonica HOM05D005120 ORTHO05D006174 1.4e-181 640.2 422 77.5
Atru.chr6.1566 Acer truncatum HOM05D005120 ORTHO05D006174 1.0e-179 634.0 522 70.1
ATR0829G037 Amborella trichopoda HOM05D005120 ORTHO05D006174 3.8e-179 632.1 450 74.7
Lalb_Chr16g0380871 Lupinus albus HOM05D005120 ORTHO05D006174 1.2e-177 627.1 452 73.0
PSO717G0011 Papaver somniferum HOM05D005120 ORTHO05D006174 6.1e-177 624.8 463 71.9
Zm00001eb025160 Zea mays HOM05D005120 ORTHO05D006174 3.7e-174 615.5 523 65.0
PSO675G2578 Papaver somniferum HOM05D005120 ORTHO05D006174 6.3e-174 614.8 463 71.7
Hund11160 Selenicereus undatus HOM05D005120 ORTHO05D006174 2.4e-173 612.8 471 70.5
DCAR_004262 Daucus carota HOM05D005120 ORTHO05D006174 8.5e-171 604.4 444 72.7
CSS0018999 Camellia sinensis var. sinensis HOM05D005120 ORTHO05D006174 5.7e-167 591.7 421 77.0
unitig_747.g21935 Utricularia gibba HOM05D005120 ORTHO05D006174 2.2e-166 589.7 463 68.5
arahy.Tifrunner.gnm1.ann1.1W9K9Y Arachis hypogaea HOM05D005120 ORTHO05D006174 1.1e-154 550.8 456 64.7
arahy.Tifrunner.gnm1.ann1.5B6WJ4 Arachis hypogaea HOM05D005120 ORTHO05D006174 1.1e-154 550.8 456 64.7
AagrBONN_evm.TU.Sc2ySwM_117.3701 Anthoceros agrestis HOM05D005120 ORTHO05D006174 4.4e-143 512.3 446 60.1
Actinidia01339 Actinidia chinensis HOM05D005120 ORTHO05D006174 8.6e-139 498.0 376 73.4
Dinv06901 Davidia involucrata HOM05D005120 ORTHO05D006174 7.3e-138 495.0 373 70.2
Ciclev10003461m.g Citrus clementina HOM05D005120 ORTHO05D006174 1.0e-136 491.1 381 70.1
Pp3c1_16500 Physcomitrium patens HOM05D005120 ORTHO05D006174 1.4e-136 490.7 439 59.2
Mapoly0008s0007 Marchantia polymorpha HOM05D005120 ORTHO05D006174 5.2e-136 488.8 430 60.7
SMO347G0341 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 2.5e-122 443.4 367 63.2
Atru.chr6.1568 Acer truncatum HOM05D005120 ORTHO05D006174 2.9e-110 403.3 230 92.2
Atru.chr6.1567 Acer truncatum HOM05D005120 ORTHO05D006174 1.6e-100 370.9 293 69.3
PRCOL_00000663 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 4.3e-98 362.8 432 47.5
Lalb_Chr16g0380881 Lupinus albus HOM05D005120 ORTHO05D006174 1.6e-92 344.4 454 47.6
FAN13G2921 Fragaria x ananassa HOM05D005120 ORTHO05D006174 5.6e-90 335.9 379 54.4
Glyma.08G265967 Glycine max HOM05D005120 ORTHO05D006174 5.1e-75 286.2 169 91.1
Cre09.g394850 Chlamydomonas reinhardtii HOM05D005120 ORTHO05D006174 1.9e-74 284.3 415 41.0
SMO367G1009 Selaginella moellendorffii HOM05D005120 ORTHO05D006174 1.8e-72 277.7 386 39.6
CANSAT64G2484 Cannabis sativa HOM05D005120 ORTHO05D006174 1.2e-71 275.0 156 94.9
Zm00001eb025140 Zea mays HOM05D005120 ORTHO05D006174 2.2e-65 254.2 209 63.6
Pp3c4_7680 Physcomitrium patens HOM05D005120 ORTHO05D006174 1.7e-62 244.6 431 33.2
AagrBONN_evm.TU.Sc2ySwM_368.2516 Anthoceros agrestis HOM05D005120 ORTHO05D006174 4.4e-58 229.9 447 34.0
arahy.Tifrunner.gnm1.ann1.B01XES Arachis hypogaea HOM05D005120 ORTHO05D006174 2.2e-54 217.6 235 54.5
CBR_g23155 Chara braunii HOM05D005120 ORTHO05D006174 1.1e-53 215.3 162 69.1
PRCOL_00006607 Prasinoderma coloniale HOM05D005120 ORTHO05D006174 1.9e-53 214.5 453 36.0
PGR044G1750 Punica granatum HOM05D005120 ORTHO05D006174 3.6e-44 183.7 144 72.2
SEGI_09610 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 2.3e-38 164.5 126 63.5
SEGI_28661 Sequoiadendron giganteum HOM05D005120 ORTHO05D006174 8.6e-30 136.0 113 64.6
CARHR291910 Cardamine hirsuta HOM05D005120 ORTHO05D006174 9.5e-29 132.5 86 77.9
CBR_g23153 Chara braunii HOM05D005120 ORTHO05D006174 4.4e-26 123.6 169 46.7
VMungo0647G0996 Vigna mungo HOM05D005120 ORTHO05D006174 1.3e-25 122.1 98 72.4
Oeu023967.3 Olea europaea HOM05D005120 ORTHO05D006174 1.1e-21 109.0 103 59.2
MCO13G610 Micromonas commoda HOM05D005120 ORTHO05D006174 1.4e-19 102.1 386 25.6
PRCOL_00001036 Prasinoderma coloniale HOM05D001145 ORTHO05D014381 6.2e-12 76.6 422 24.4
CDE03G0049 Ceratophyllum demersum HOM05D005120 ORTHO05D006174 2.3e-11 74.7 67 65.7
PRCOL_00005007 Prasinoderma coloniale HOM05D013059 ORTHO05D014381 6.8e-11 73.2 221 26.7


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