Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012537 Carpinus fangiana HOM05D006140 ORTHO05D007834 0.0e+00 1256.1 653 100.0
CiPaw.11G100200 Carya illinoinensis HOM05D006140 ORTHO05D007834 6.7e-226 787.7 707 63.8
QL12p000198 Quercus lobata HOM05D006140 ORTHO05D007834 1.2e-209 733.8 769 58.9
Dinv06909 Davidia involucrata HOM05D006140 ORTHO05D007834 6.4e-160 568.5 709 50.5
TWI60G0968 Tripterygium wilfordii HOM05D006140 ORTHO05D007834 8.1e-155 551.6 726 49.3
Actinidia14773 Actinidia chinensis HOM05D006140 ORTHO05D007834 7.6e-153 545.0 717 48.7
Manes.17G016001 Manihot esculenta HOM05D006140 ORTHO05D007834 1.4e-151 540.8 705 47.9
TAR629G0094 Trochodendron aralioides HOM05D006140 ORTHO05D007834 5.5e-151 538.9 718 47.5
Potri.001G134800 Populus trichocarpa HOM05D006140 ORTHO05D007834 1.2e-150 537.7 709 48.8
Potri.003G098700 Populus trichocarpa HOM05D006140 ORTHO05D007834 1.1e-148 531.2 710 48.2
Prupe.5G025700 Prunus persica HOM05D006140 ORTHO05D007834 3.3e-148 529.6 724 47.2
MD06G1024600 Malus domestica HOM05D006140 ORTHO05D007834 1.5e-140 504.2 637 49.1
Gohir.A12G205000 Gossypium hirsutum HOM05D006140 ORTHO05D007834 4.3e-140 502.7 715 45.2
CSS0008724 Camellia sinensis var. sinensis HOM05D006140 ORTHO05D007834 1.6e-134 484.2 743 44.4
CANSAT21G0745 Cannabis sativa HOM05D006140 ORTHO05D007834 6.7e-133 478.8 674 47.6
ClCG09G011510 Citrullus lanatus HOM05D006140 ORTHO05D007834 2.0e-132 477.2 729 42.9
Gorai.008G222800 Gossypium raimondii HOM05D006140 ORTHO05D007834 3.3e-132 476.5 714 43.7
Atru.chr6.1557 Acer truncatum HOM05D006140 ORTHO05D007834 5.7e-132 475.7 771 41.9
Duzib205G1045 Durio zibethinus HOM05D006140 ORTHO05D007834 5.7e-132 475.7 703 45.8
Gohir.D12G207400 Gossypium hirsutum HOM05D006140 ORTHO05D007834 7.4e-132 475.3 714 43.7
FAN18G2089 Fragaria x ananassa HOM05D006140 ORTHO05D007834 2.8e-131 473.4 699 44.2
Thecc.03G312700 Theobroma cacao HOM05D006140 ORTHO05D007834 5.3e-130 469.2 663 46.3
FAN18G2328 Fragaria x ananassa HOM05D006140 ORTHO05D007834 6.9e-130 468.8 700 44.4
FvH4_5g23380 Fragaria vesca HOM05D006140 ORTHO05D007834 9.1e-130 468.4 699 44.8
RcHm_v2.0_Chr7g0212401 Rosa chinensis HOM05D006140 ORTHO05D007834 6.5e-128 462.2 724 43.1
Sed0012782 Sechium edule HOM05D006140 ORTHO05D007834 5.5e-127 459.1 716 42.5
Glyma.09G210300 Glycine max HOM05D006140 ORTHO05D007834 7.4e-124 448.7 698 44.0
FAN08G2467 Fragaria x ananassa HOM05D006140 ORTHO05D007834 1.7e-123 447.6 695 44.0
CsaV3_3G048750 Cucumis sativus L. HOM05D006140 ORTHO05D007834 1.8e-122 444.1 727 42.5
VMungo1215G1486 Vigna mungo HOM05D006140 ORTHO05D007834 7.7e-121 438.7 701 42.4
Lalb_Chr09g0325351 Lupinus albus HOM05D006140 ORTHO05D007834 1.3e-120 438.0 689 44.1
Lj2g0005195 Lotus japonicus HOM05D006140 ORTHO05D007834 2.9e-120 436.8 679 43.2
Sc22g0001920 Simmondsia chinensis HOM05D006140 ORTHO05D007834 2.5e-119 433.7 691 41.7
Glyma.01G010800 Glycine max HOM05D006140 ORTHO05D007834 1.6e-118 431.0 691 43.1
Phvul.002G133700 Phaseolus vulgaris HOM05D006140 ORTHO05D007834 3.0e-117 426.8 698 41.3
arahy.Tifrunner.gnm1.ann1.B53Y8P Arachis hypogaea HOM05D006140 ORTHO05D007834 4.8e-115 419.5 723 41.2
arahy.Tifrunner.gnm1.ann1.HKBA6R Arachis hypogaea HOM05D006140 ORTHO05D007834 4.8e-115 419.5 723 41.2
FAN04G1734 Fragaria x ananassa HOM05D006140 ORTHO05D007834 4.1e-114 416.4 663 43.9
Nn1g01908 Nelumbo nucifera HOM05D006140 ORTHO05D007834 4.1e-114 416.4 732 40.2
PGR042G2343 Punica granatum HOM05D006140 ORTHO05D007834 2.2e-112 410.6 733 40.9
vmacro14212 Vaccinium macrocarpon HOM05D006140 ORTHO05D007834 5.5e-111 406.0 913 36.7
Ca_25157_v3 Cicer arietinum L. HOM05D006140 ORTHO05D007834 3.6e-110 403.3 703 40.4
Sabra01G0104200 Salix brachista HOM05D006140 ORTHO05D007834 4.4e-108 396.4 564 46.8
Psat2g140200 Pisum sativum HOM05D006140 ORTHO05D007834 3.7e-107 393.3 729 39.1
Rhsim07G0134400 Rhododendron simsii HOM05D006140 ORTHO05D007834 8.3e-107 392.1 883 36.4
TPR.G19464 Trifolium pratense HOM05D006140 ORTHO05D007834 2.7e-105 387.1 645 40.8
Medtr5g027920 Medicago truncatula HOM05D006140 ORTHO05D007834 6.5e-104 382.5 697 38.7
MELO3C030376.2 Cucumis melo HOM05D006140 ORTHO05D007834 4.2e-103 379.8 801 38.1
DCAR_008203 Daucus carota HOM05D006140 ORTHO05D007834 1.0e-101 375.2 714 38.9
THA.LOC104798454 Tarenaya hassleriana HOM05D006140 ORTHO05D007834 3.4e-100 370.2 714 40.3
Migut.A00588 Erythranthe guttata HOM05D006140 ORTHO05D007834 2.2e-99 367.5 700 38.1
BcaC06g31534 Brassica carinata HOM05D006140 ORTHO05D007834 1.4e-98 364.8 706 37.8
Sopen08g024830 Solanum pennellii HOM05D006140 ORTHO05D007834 1.8e-98 364.4 714 38.4
Sp2g10500 Schrenkiella parvula HOM05D006140 ORTHO05D007834 2.9e-96 357.1 726 38.0
GSVIVG01012994001 Vitis vinifera HOM05D006140 ORTHO05D007834 1.1e-95 355.1 317 63.1
BraA06t27522Z Brassica rapa HOM05D006140 ORTHO05D007834 1.6e-94 351.3 687 38.4
Solyc08g076190.3 Solanum lycopersicum HOM05D006140 ORTHO05D007834 2.1e-94 350.9 704 38.1
HanXRQChr15g0469721 Helianthus annuus HOM05D006140 ORTHO05D007834 4.7e-94 349.7 650 40.0
A06p46490 Brassica napus HOM05D006140 ORTHO05D007834 6.1e-94 349.4 690 38.3
Aqoxy3G02157 Aquilegia oxysepala HOM05D006140 ORTHO05D007834 3.0e-93 347.1 795 34.6
Aa31LG9G7440 Aethionema arabicum HOM05D006140 ORTHO05D007834 6.8e-93 345.9 714 37.4
ECA233G4025 Erigeron canadensis HOM05D006140 ORTHO05D007834 2.8e-91 340.5 715 36.2
SGA_v2.0_scaffold89G27431 Striga asiatica HOM05D006140 ORTHO05D007834 5.4e-90 336.3 699 37.1
BcaC06g34418 Brassica carinata HOM05D006140 ORTHO05D007834 2.7e-89 334.0 680 37.9
C07p28720 Brassica napus HOM05D006140 ORTHO05D007834 2.7e-89 334.0 680 37.9
BolC7t43410H Brassica oleracea HOM05D006140 ORTHO05D007834 2.7e-89 334.0 680 37.9
Ciclev10003207m.g Citrus clementina HOM05D006140 ORTHO05D007834 1.3e-88 331.6 305 58.0
Lsat_1_v5_gn_6_17700 Lactuca sativa HOM05D006140 ORTHO05D007834 7.3e-87 325.9 769 35.6
AT5G45610 Arabidopsis thaliana HOM05D006140 ORTHO05D007834 8.0e-86 322.4 628 37.9
AUR62027322 Chenopodium quinoa HOM05D006140 ORTHO05D007834 4.0e-85 320.1 667 36.1
Thhalv10000816m.g Eutrema salsugineum HOM05D006140 ORTHO05D007834 6.8e-85 319.3 698 35.5
PSO063G5188 Papaver somniferum HOM05D006140 ORTHO05D007834 1.5e-84 318.2 761 33.9
Peaxi162Scf00879g00021 Petunia axillaris HOM05D006140 ORTHO05D007834 7.5e-84 315.8 687 36.8
Hund11103 Selenicereus undatus HOM05D006140 ORTHO05D007834 1.1e-82 312.0 729 35.7
PSO782G1224 Papaver somniferum HOM05D006140 ORTHO05D007834 2.4e-82 310.8 768 33.2
AL8G13070 Arabidopsis lyrata HOM05D006140 ORTHO05D007834 3.5e-81 307.0 629 37.4
Nitab4.5_0000543g0200 Nicotiana tabacum HOM05D006140 ORTHO05D007834 4.6e-81 306.6 721 35.4
SalBow1G1748 Salvia bowleyana HOM05D006140 ORTHO05D007834 3.9e-80 303.5 681 36.1
EL10Ac5g11927 Beta vulgaris HOM05D006140 ORTHO05D007834 8.6e-80 302.4 666 36.6
Carub.0008s0241 Capsella rubella HOM05D006140 ORTHO05D007834 3.6e-78 297.0 597 38.4
CARHR176410 Cardamine hirsuta HOM05D006140 ORTHO05D007834 2.3e-77 294.3 395 44.8
AUR62007410 Chenopodium quinoa HOM05D006140 ORTHO05D007834 9.8e-76 288.9 574 37.5
Nitab4.5_0003023g0010 Nicotiana tabacum HOM05D006140 ORTHO05D007834 2.2e-67 261.2 729 33.5
ATR0829G104 Amborella trichopoda HOM05D006140 ORTHO05D007834 2.9e-67 260.8 497 38.6
Haze_08125 Corylus avellana HOM05D006140 ORTHO05D007834 2.1e-62 244.6 139 95.7
PGSC0003DMG401009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 4.7e-62 243.4 263 51.0
Cc00_g09430 Coffea canephora HOM05D006140 ORTHO05D007834 6.2e-62 243.0 263 51.3
HPP92_020808 Vanilla planifolia HOM05D006140 ORTHO05D007834 4.9e-59 233.4 688 29.4
Eucgr.E01307 Eucalyptus grandis HOM05D006140 ORTHO05D007834 4.6e-57 226.9 411 39.9
Lj3g0005794 Lotus japonicus HOM05D006140 ORTHO05D007834 3.9e-56 223.8 216 56.5
Ah.12g055990 Amaranthus hybridus HOM05D006140 ORTHO05D007834 1.8e-53 214.9 620 33.5
Zm00001eb208860 Zea mays HOM05D006140 ORTHO05D007834 4.6e-49 200.3 440 34.3
Cc00_g09420 Coffea canephora HOM05D006140 ORTHO05D007834 4.6e-41 173.7 384 36.2
SEGI_17370 Sequoiadendron giganteum HOM05D006140 ORTHO05D007834 4.8e-38 163.7 692 25.9
COL.COLO4_16905 Corchorus olitorius HOM05D006140 ORTHO05D007834 1.2e-36 159.1 315 35.9
MBI04_g36019_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 2.0e-36 158.3 438 32.4
Hma1.2p1_1460F.1_g284980 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.1e-33 148.3 330 37.9
Actinidia24581 Actinidia chinensis HOM05D006140 ORTHO05D007834 1.3e-30 139.0 301 36.9
Lj6g0014120 Lotus japonicus HOM05D006140 ORTHO05D007834 2.2e-27 128.3 516 27.3
PGSC0003DMG402009319 Solanum tuberosum HOM05D006140 ORTHO05D007834 1.5e-23 115.5 344 32.6
unitig_32.g10971 Utricularia gibba HOM05D006140 ORTHO05D007834 5.7e-23 113.6 192 37.5
CDE02G0505 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 2.2e-22 111.7 318 33.0
Hma1.2p1_1460F.1_g284990 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 2.2e-22 111.7 172 44.8
CDE02G1222 Ceratophyllum demersum HOM05D006140 ORTHO05D007834 2.8e-22 111.3 139 51.1
MBI04_g20983_MAGBIO Magnolia biondii HOM05D006140 ORTHO05D007834 1.1e-21 109.4 124 56.5
TAR629G2830 Trochodendron aralioides HOM05D006140 ORTHO05D007834 2.9e-19 101.3 199 36.2
Ciclev10003621m.g Citrus clementina HOM05D006140 ORTHO05D007834 1.9e-18 98.6 323 30.0
SHI20257 Sapria himalayana HOM05D006140 ORTHO05D007834 1.4e-16 92.4 150 46.0
SHI20259 Sapria himalayana HOM05D006140 ORTHO05D007834 2.0e-15 88.6 250 30.4
Pp3c4_25200 Physcomitrium patens HOM05D006140 ORTHO05D007834 1.4e-13 82.4 547 23.4
Hma1.2p1_1819F.1_g304030 Hydrangea macrophylla HOM05D006140 ORTHO05D007834 3.1e-13 81.3 90 47.8
unitig_32.g10972 Utricularia gibba HOM05D006140 ORTHO05D007834 5.5e-10 70.5 159 37.1
Mapoly0016s0037 Marchantia polymorpha HOM05D006140 ORTHO05D007834 1.2e-09 69.3 194 24.2
SMO367G0412 Selaginella moellendorffii HOM05D006140 ORTHO05D007834 4.7e-09 67.4 576 20.8
Duzib084G0453 Durio zibethinus HOM05D006140 ORTHO05D007834 1.7e-06 58.9 104 42.3
AagrBONN_evm.TU.Sc2ySwM_344.4141 Anthoceros agrestis HOM05D006140 ORTHO05D007834 3.7e-06 57.8 172 26.2
GSVIVG01012998001 Vitis vinifera HOM05D006140 ORTHO05D007834 8.2e-06 56.6 57 52.6


User provided reference genes

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