Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012362 Carpinus fangiana HOM05D005771 ORTHO05D007173 2.3e-199 698.7 365 100.0
Haze_08321 Corylus avellana HOM05D005771 ORTHO05D007173 1.5e-185 652.9 423 83.7
CiPaw.11G085900 Carya illinoinensis HOM05D005771 ORTHO05D007173 1.3e-162 576.6 370 81.9
QL12p007731 Quercus lobata HOM05D005771 ORTHO05D007173 1.2e-150 537.0 374 75.1
CiPaw.12G058800 Carya illinoinensis HOM05D005771 ORTHO05D007173 2.2e-141 506.1 370 73.5
Dinv25170 Davidia involucrata HOM05D005771 ORTHO05D007173 4.9e-125 451.8 375 65.1
Atru.chr9.1139 Acer truncatum HOM05D005771 ORTHO05D007173 7.8e-123 444.5 376 64.6
MD06G1043400 Malus domestica HOM05D005771 ORTHO05D007173 1.6e-120 436.8 366 64.8
Prupe.5G050200 Prunus persica HOM05D005771 ORTHO05D007173 1.3e-117 427.2 355 64.5
RcHm_v2.0_Chr7g0207891 Rosa chinensis HOM05D005771 ORTHO05D007173 2.9e-117 426.0 381 62.5
ClCG10G001970 Citrullus lanatus HOM05D005771 ORTHO05D007173 1.7e-114 416.8 394 58.4
Ciclev10020716m.g Citrus clementina HOM05D005771 ORTHO05D007173 8.7e-114 414.5 372 61.8
MD16G1267400 Malus domestica HOM05D005771 ORTHO05D007173 3.6e-112 409.1 367 61.9
FvH4_5g20870 Fragaria vesca HOM05D005771 ORTHO05D007173 1.5e-110 403.7 383 59.5
CANSAT21G2176 Cannabis sativa HOM05D005771 ORTHO05D007173 2.0e-110 403.3 352 60.8
Potri.001G148500 Populus trichocarpa HOM05D005771 ORTHO05D007173 2.2e-109 399.8 377 60.7
Potri.003G085901 Populus trichocarpa HOM05D005771 ORTHO05D007173 1.1e-108 397.5 377 59.4
FAN18G3681 Fragaria x ananassa HOM05D005771 ORTHO05D007173 7.1e-108 394.8 393 58.0
Sed0018056 Sechium edule HOM05D005771 ORTHO05D007173 1.6e-107 393.7 373 58.7
FAN08G3334 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.7e-107 392.9 398 57.3
Manes.15G171600 Manihot esculenta HOM05D005771 ORTHO05D007173 7.9e-107 391.3 382 58.6
Hma1.2p1_0414F.1_g147560 Hydrangea macrophylla HOM05D005771 ORTHO05D007173 1.0e-106 391.0 388 57.0
Duzib106G1532 Durio zibethinus HOM05D005771 ORTHO05D007173 1.8e-106 390.2 352 60.8
FAN04G1778 Fragaria x ananassa HOM05D005771 ORTHO05D007173 2.3e-106 389.8 391 57.0
Gohir.D05G283033 Gossypium hirsutum HOM05D005771 ORTHO05D007173 2.3e-106 389.8 393 56.5
TAR629G1255 Trochodendron aralioides HOM05D005771 ORTHO05D007173 2.5e-105 386.3 400 54.8
TWI81G0410 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 7.4e-105 384.8 365 59.7
Gorai.009G296800 Gossypium raimondii HOM05D005771 ORTHO05D007173 9.6e-105 384.4 393 55.5
Eucgr.D02148 Eucalyptus grandis HOM05D005771 ORTHO05D007173 3.1e-103 379.4 367 57.8
Gohir.A05G281200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 3.1e-103 379.4 393 55.0
CsaV3_3G002100 Cucumis sativus L. HOM05D005771 ORTHO05D007173 9.0e-103 377.9 395 54.9
Thecc.10G165100 Theobroma cacao HOM05D005771 ORTHO05D007173 9.0e-103 377.9 352 60.5
Ca_22032_v3 Cicer arietinum L. HOM05D005771 ORTHO05D007173 4.5e-102 375.6 344 61.0
arahy.Tifrunner.gnm1.ann1.2CCA8K Arachis hypogaea HOM05D005771 ORTHO05D007173 7.6e-102 374.8 366 59.0
arahy.Tifrunner.gnm1.ann1.X1SA4Y Arachis hypogaea HOM05D005771 ORTHO05D007173 7.6e-102 374.8 366 59.0
Gohir.A10G183200 Gossypium hirsutum HOM05D005771 ORTHO05D007173 1.3e-101 374.0 348 59.2
Cc08_g01580 Coffea canephora HOM05D005771 ORTHO05D007173 1.7e-101 373.6 381 55.6
PGR031G0896 Punica granatum HOM05D005771 ORTHO05D007173 2.9e-101 372.9 369 56.6
Lalb_Chr05g0220751 Lupinus albus HOM05D005771 ORTHO05D007173 1.9e-100 370.2 379 56.7
TWI60G1113 Tripterygium wilfordii HOM05D005771 ORTHO05D007173 1.9e-100 370.2 366 57.7
Gorai.011G213100 Gossypium raimondii HOM05D005771 ORTHO05D007173 5.5e-100 368.6 348 58.3
Lj2g0023107 Lotus japonicus HOM05D005771 ORTHO05D007173 1.2e-99 367.5 345 59.4
Nn6g33714 Nelumbo nucifera HOM05D005771 ORTHO05D007173 1.8e-98 363.6 349 55.6
MELO3C013882.2 Cucumis melo HOM05D005771 ORTHO05D007173 3.9e-98 362.5 430 51.2
Gohir.D10G190000 Gossypium hirsutum HOM05D005771 ORTHO05D007173 3.9e-98 362.5 349 57.9
Glyma.17G150800 Glycine max HOM05D005771 ORTHO05D007173 1.5e-97 360.5 345 58.6
Phvul.003G227100 Phaseolus vulgaris HOM05D005771 ORTHO05D007173 1.9e-97 360.1 363 57.0
TPR.G11182 Trifolium pratense HOM05D005771 ORTHO05D007173 4.3e-97 359.0 405 54.3
Medtr4g099070 Medicago truncatula HOM05D005771 ORTHO05D007173 7.4e-97 358.2 369 56.9
Actinidia31481 Actinidia chinensis HOM05D005771 ORTHO05D007173 2.1e-96 356.7 378 54.2
Lalb_Chr16g0386311 Lupinus albus HOM05D005771 ORTHO05D007173 2.1e-96 356.7 366 57.1
COL.COLO4_05118 Corchorus olitorius HOM05D005771 ORTHO05D007173 4.8e-96 355.5 346 56.4
Actinidia10872 Actinidia chinensis HOM05D005771 ORTHO05D007173 1.8e-95 353.6 384 54.2
Oeu006260.1 Olea europaea HOM05D005771 ORTHO05D007173 1.2e-94 350.9 372 54.3
Solyc08g077450.4 Solanum lycopersicum HOM05D005771 ORTHO05D007173 5.8e-94 348.6 384 53.4
Sopen08g026040 Solanum pennellii HOM05D005771 ORTHO05D007173 5.0e-93 345.5 385 52.7
Glyma.05G068200 Glycine max HOM05D005771 ORTHO05D007173 7.2e-92 341.7 347 56.8
Nitab4.5_0001444g0090 Nicotiana tabacum HOM05D005771 ORTHO05D007173 7.2e-92 341.7 384 54.2
Lj4g0020972 Lotus japonicus HOM05D005771 ORTHO05D007173 1.0e-90 337.8 377 53.8
Aqoxy3G02583 Aquilegia oxysepala HOM05D005771 ORTHO05D007173 2.3e-90 336.7 350 56.0
Sabra03G0055800 Salix brachista HOM05D005771 ORTHO05D007173 1.1e-89 334.3 418 51.4
Nitab4.5_0001708g0070 Nicotiana tabacum HOM05D005771 ORTHO05D007173 1.3e-88 330.9 366 54.4
MSTRG.1962 Avicennia marina HOM05D005771 ORTHO05D007173 4.1e-87 325.9 367 52.9
Hund11296 Selenicereus undatus HOM05D005771 ORTHO05D007173 2.0e-86 323.6 355 52.4
CSS0003087 Camellia sinensis var. sinensis HOM05D005771 ORTHO05D007173 1.0e-85 321.2 382 50.3
Cpa.g.sc2.371 Carica papaya HOM05D005771 ORTHO05D007173 1.3e-85 320.9 301 59.8
Migut.E00807 Erythranthe guttata HOM05D005771 ORTHO05D007173 5.0e-85 318.9 370 51.6
Migut.E00856 Erythranthe guttata HOM05D005771 ORTHO05D007173 4.2e-84 315.8 370 51.1
Sc01g0007800 Simmondsia chinensis HOM05D005771 ORTHO05D007173 4.2e-84 315.8 384 51.8
DCAR_000726 Daucus carota HOM05D005771 ORTHO05D007173 6.7e-82 308.5 382 47.9
CARHR032110 Cardamine hirsuta HOM05D005771 ORTHO05D007173 2.0e-81 307.0 362 51.7
SGA_v2.0_scaffold20G09242 Striga asiatica HOM05D005771 ORTHO05D007173 2.5e-81 306.6 371 48.8
Thhalv10008194m.g Eutrema salsugineum HOM05D005771 ORTHO05D007173 9.7e-81 304.7 366 51.1
Rhsim07G0120600 Rhododendron simsii HOM05D005771 ORTHO05D007173 1.7e-80 303.9 448 45.5
THA.LOC104812740 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 1.1e-79 301.2 361 52.4
AL1G47010 Arabidopsis lyrata HOM05D005771 ORTHO05D007173 2.4e-79 300.1 362 50.0
AT1G32730 Arabidopsis thaliana HOM05D005771 ORTHO05D007173 4.5e-78 295.8 361 49.6
VMungo0251G2395 Vigna mungo HOM05D005771 ORTHO05D007173 1.3e-77 294.3 302 57.9
Sabra01G0116900 Salix brachista HOM05D005771 ORTHO05D007173 1.9e-76 290.4 381 50.4
Peaxi162Scf00084g00314 Petunia axillaris HOM05D005771 ORTHO05D007173 9.4e-76 288.1 365 47.9
Aa31LG2G13250 Aethionema arabicum HOM05D005771 ORTHO05D007173 5.1e-74 282.3 365 48.8
Carub.0001s3106 Capsella rubella HOM05D005771 ORTHO05D007173 8.8e-74 281.6 309 51.8
CDE02G0742 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 9.7e-73 278.1 376 44.7
PSO782G3090 Papaver somniferum HOM05D005771 ORTHO05D007173 2.2e-72 276.9 347 47.8
PSO063G1478 Papaver somniferum HOM05D005771 ORTHO05D007173 6.3e-72 275.4 348 47.7
DCAR_000728 Daucus carota HOM05D005771 ORTHO05D007173 2.4e-71 273.5 409 42.5
THA.LOC104807943 Tarenaya hassleriana HOM05D005771 ORTHO05D007173 3.1e-71 273.1 365 48.2
C05p32200 Brassica napus HOM05D005771 ORTHO05D007173 3.5e-70 269.6 375 48.0
BolC5t31952H Brassica oleracea HOM05D005771 ORTHO05D007173 3.5e-70 269.6 375 48.0
EL10Ac5g12212 Beta vulgaris HOM05D005771 ORTHO05D007173 1.3e-69 267.7 343 47.2
HanXRQChr12g0368601 Helianthus annuus HOM05D005771 ORTHO05D007173 2.2e-69 266.9 377 46.7
Psat4g077240 Pisum sativum HOM05D005771 ORTHO05D007173 2.9e-69 266.5 267 58.8
GSVIVG01013265001 Vitis vinifera HOM05D005771 ORTHO05D007173 3.8e-69 266.2 161 80.7
ECA233G5206 Erigeron canadensis HOM05D005771 ORTHO05D007173 1.4e-66 257.7 392 44.1
Sp1g28240 Schrenkiella parvula HOM05D005771 ORTHO05D007173 6.7e-66 255.4 366 45.6
vmacro14112 Vaccinium macrocarpon HOM05D005771 ORTHO05D007173 5.7e-65 252.3 269 56.1
Lsat_1_v5_gn_6_67960 Lactuca sativa HOM05D005771 ORTHO05D007173 1.3e-64 251.1 355 46.2
Sabra01G0118400 Salix brachista HOM05D005771 ORTHO05D007173 4.1e-63 246.1 304 52.3
CDE11G1022 Ceratophyllum demersum HOM05D005771 ORTHO05D007173 7.0e-63 245.4 391 39.4
FAN13G3323 Fragaria x ananassa HOM05D005771 ORTHO05D007173 9.1e-63 245.0 383 45.2
HPP92_007338 Vanilla planifolia HOM05D005771 ORTHO05D007173 4.5e-62 242.7 379 42.0
BcaC05g27301 Brassica carinata HOM05D005771 ORTHO05D007173 5.5e-60 235.7 387 43.9
AUR62007206 Chenopodium quinoa HOM05D005771 ORTHO05D007173 8.0e-59 231.9 303 47.5
Oeu039354.1 Olea europaea HOM05D005771 ORTHO05D007173 1.0e-58 231.5 263 52.1
AUR62018795 Chenopodium quinoa HOM05D005771 ORTHO05D007173 1.8e-58 230.7 304 48.7
ATR0829G207 Amborella trichopoda HOM05D005771 ORTHO05D007173 2.3e-58 230.3 364 39.3
BcaC05g27831 Brassica carinata HOM05D005771 ORTHO05D007173 2.8e-56 223.4 305 46.2
C05p38290 Brassica napus HOM05D005771 ORTHO05D007173 2.8e-56 223.4 305 46.2
BolC5t32561H Brassica oleracea HOM05D005771 ORTHO05D007173 2.8e-56 223.4 305 46.2
unitig_21.g20376 Utricularia gibba HOM05D005771 ORTHO05D007173 2.4e-55 220.3 399 41.9
Os08g0129500 Oryza sativa ssp. japonica HOM05D005771 ORTHO05D007173 2.0e-54 217.2 388 38.4
Zm00001eb261700 Zea mays HOM05D005771 ORTHO05D007173 2.9e-53 213.4 357 37.5
A05p24640 Brassica napus HOM05D005771 ORTHO05D007173 1.9e-52 210.7 304 45.4
BraA05t21350Z Brassica rapa HOM05D005771 ORTHO05D007173 1.9e-52 210.7 304 45.4
Ah.07g199650 Amaranthus hybridus HOM05D005771 ORTHO05D007173 1.9e-44 184.1 397 34.0
TPR.G12459 Trifolium pratense HOM05D005771 ORTHO05D007173 9.8e-33 145.2 156 59.0
SEGI_22059 Sequoiadendron giganteum HOM05D005771 ORTHO05D000001 7.3e-28 129.0 404 30.7
Psat4g077280 Pisum sativum HOM05D005771 ORTHO05D007173 5.1e-21 106.3 73 68.5
Zm00001eb173270 Zea mays HOM05D005771 ORTHO05D007173 6.6e-21 105.9 226 34.1
Mapoly0082s0082 Marchantia polymorpha HOM05D005771 ORTHO05D007173 7.3e-20 102.4 337 27.0
Pp3c2_10410 Physcomitrium patens HOM05D005771 ORTHO05D007173 8.1e-19 99.0 333 27.9
AagrBONN_evm.TU.Sc2ySwM_117.836 Anthoceros agrestis HOM05D005771 ORTHO05D007173 2.4e-15 87.4 340 26.8
arahy.Tifrunner.gnm1.ann1.ARXY04 Arachis hypogaea HOM05D005771 ORTHO05D007173 1.1e-12 78.6 86 53.5
SEGI_34267 Sequoiadendron giganteum HOM05D005771 ORTHO05D007173 1.1e-12 78.6 73 54.8
TAR636G0006 Trochodendron aralioides HOM05D005771 ORTHO05D007173 1.9e-12 77.8 71 56.3
SMO347G0210 Selaginella moellendorffii HOM05D005771 ORTHO05D007173 7.1e-07 59.3 256 24.6
Cpa.g.sc2.370 Carica papaya HOM05D005771 ORTHO05D007173 9.3e-07 58.9 53 64.2


User provided reference genes

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