Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012336 Carpinus fangiana HOM05D011273 ORTHO05D013289 2.3e-93 345.5 168 100.0
Cfa012649 Carpinus fangiana HOM05D011273 ORTHO05D013289 9.3e-87 323.6 168 95.8
Cfa021206 Carpinus fangiana HOM05D011273 ORTHO05D013289 2.1e-86 322.4 168 95.2
Cfa018419 Carpinus fangiana HOM05D011273 ORTHO05D013289 2.9e-80 302.0 168 89.3
Cfa008536 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.4e-66 256.5 169 72.2
Cfa010712 Carpinus fangiana HOM05D011273 ORTHO05D013289 5.3e-66 254.6 169 72.2
Cfa019640 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.2e-65 253.4 168 76.2
Cfa008487 Carpinus fangiana HOM05D011273 ORTHO05D013289 9.3e-63 243.8 169 69.8
Cfa005445 Carpinus fangiana HOM05D011273 ORTHO05D013289 5.1e-53 211.5 175 61.7
Cfa002369 Carpinus fangiana HOM05D011273 ORTHO05D013289 3.7e-43 178.7 168 58.9
Cfa010107 Carpinus fangiana HOM05D011273 ORTHO05D013289 5.3e-34 148.3 166 44.6
Cfa022968 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.2e-33 147.1 166 44.6
Cfa012337 Carpinus fangiana HOM05D011273 ORTHO05D013289 4.4e-28 128.6 66 97.0
Cfa002120 Carpinus fangiana HOM05D011273 ORTHO05D013289 9.2e-18 94.4 118 39.8
Haze_20224 Corylus avellana HOM05D000484 ORTHO05D000346 2.9e-11 72.8 154 29.2
Cfa005677 Carpinus fangiana HOM05D011273 ORTHO05D013289 1.4e-10 70.5 94 39.4
DCAR_028160 Daucus carota HOM05D001383 ORTHO05D000309 1.6e-09 67.0 147 29.3
Hma1.2p1_0230F.1_g097240 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.7e-09 66.2 76 39.5
Rhsim01G0020400 Rhododendron simsii HOM05D001383 ORTHO05D000309 3.5e-09 65.9 84 40.5
DCAR_023907 Daucus carota HOM05D011273 ORTHO05D000309 1.0e-08 64.3 145 29.0
Hma1.2p1_0012F.1_g007535 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.1e-07 60.8 86 34.9
SGA_v2.0_scaffold15G07207 Striga asiatica HOM05D001383 ORTHO05D000309 1.1e-07 60.8 105 28.6
SGA_v2.0_scaffold4G02359 Striga asiatica HOM05D001383 ORTHO05D000309 1.1e-07 60.8 107 35.5
Dinv09832 Davidia involucrata HOM05D001383 ORTHO05D000309 2.5e-07 59.7 68 39.7
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.5e-07 59.7 61 39.3
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.3e-07 59.3 61 39.3
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.3e-07 59.3 71 38.0
Hma1.2p1_0470F.1_g159220 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.3e-07 58.9 65 41.5
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.6e-07 58.5 77 36.4
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.6e-07 58.5 57 45.6
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 7.3e-07 58.2 59 40.7
Lsat_1_v5_gn_3_138160 Lactuca sativa HOM05D009585 ORTHO05D000309 7.3e-07 58.2 72 37.5
Nitab4.5_0008271g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 7.3e-07 58.2 80 33.8
VMungo0647G2310 Vigna mungo HOM05D008589 ORTHO05D010715 7.3e-07 58.2 116 26.7
Medtr2g008290 Medicago truncatula HOM05D001383 ORTHO05D000309 9.5e-07 57.8 79 31.6
Medtr5g021030 Medicago truncatula HOM05D001383 ORTHO05D000309 9.5e-07 57.8 79 31.6
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.2e-06 57.4 78 35.9
Medtr1g070405 Medicago truncatula HOM05D001383 ORTHO05D000309 1.2e-06 57.4 81 32.1
Glyma.01G130300 Glycine max HOM05D001383 ORTHO05D000309 1.6e-06 57.0 88 31.8
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.6e-06 57.0 57 45.6
SGA_v2.0_scaffold283G46984 Striga asiatica HOM05D001383 ORTHO05D000309 1.6e-06 57.0 108 28.7
Cfa007386 Carpinus fangiana HOM05D005182 ORTHO05D006631 2.1e-06 56.6 112 31.2
Lsat_1_v5_gn_4_135900 Lactuca sativa HOM05D009585 ORTHO05D000309 2.1e-06 56.6 72 36.1
Nitab4.5_0011664g0010 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.1e-06 56.6 73 35.6
Nitab4.5_0029094g0020 Nicotiana tabacum HOM05D004040 ORTHO05D000309 2.1e-06 56.6 73 35.6
Hma1.2p1_0257F.1_g103490 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.8e-06 56.2 71 38.0
Medtr8g466420 Medicago truncatula HOM05D009039 ORTHO05D011159 2.8e-06 56.2 80 37.5
Medtr2g017540 Medicago truncatula HOM05D001383 ORTHO05D000309 3.6e-06 55.8 71 31.0
Peaxi162Scf00446g00005 Petunia axillaris HOM05D001383 ORTHO05D000309 3.6e-06 55.8 59 40.7
Ah.03g139560 Amaranthus hybridus HOM05D008388 ORTHO05D000309 4.7e-06 55.5 97 37.1
CAN.G1005.18 Capsicum annuum HOM05D011038 ORTHO05D004172 4.7e-06 55.5 73 39.7
VMungo1383G1984 Vigna mungo HOM05D008589 ORTHO05D010715 4.7e-06 55.5 112 30.4
AUR62006272 Chenopodium quinoa HOM05D008388 ORTHO05D000309 6.2e-06 55.1 140 30.7
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 6.2e-06 55.1 90 33.3
Cfa017746 Carpinus fangiana HOM05D014565 ORTHO05D013289 8.0e-06 54.7 110 28.2
Hma1.2p1_0128F.1_g059990 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.0e-06 54.7 61 39.3
Nitab4.5_0001288g0050 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.0e-06 54.7 73 32.9
Nitab4.5_0001839g0060 Nicotiana tabacum HOM05D004040 ORTHO05D000309 8.0e-06 54.7 73 32.9
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 8.0e-06 54.7 77 33.8
QL08p000859 Quercus lobata HOM05D022142 ORTHO05D000309 8.0e-06 54.7 106 30.2


User provided reference genes

Program Settings