Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012327 Carpinus fangiana HOM05D006150 ORTHO05D007745 1.5e-175 619.4 302 100.0
Haze_08363 Corylus avellana HOM05D006150 ORTHO05D007745 4.0e-165 584.7 327 88.7
CiPaw.11G072300 Carya illinoinensis HOM05D006150 ORTHO05D007745 5.6e-151 537.7 302 84.8
TAR636G1440 Trochodendron aralioides HOM05D006150 ORTHO05D007745 3.3e-143 511.9 295 82.0
Gohir.A12G212700 Gossypium hirsutum HOM05D006150 ORTHO05D007745 9.6e-143 510.4 305 80.0
Gorai.008G230800 Gossypium raimondii HOM05D006150 ORTHO05D007745 8.1e-142 507.3 305 79.7
RcHm_v2.0_Chr7g0205681 Rosa chinensis HOM05D006150 ORTHO05D007745 4.0e-141 505.0 299 81.3
Gohir.D12G215200 Gossypium hirsutum HOM05D006150 ORTHO05D007745 6.9e-141 504.2 305 79.0
CSS0019555 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 2.0e-140 502.7 294 79.9
Thecc.03G240100 Theobroma cacao HOM05D006150 ORTHO05D007745 2.6e-140 502.3 309 78.0
Rhsim07G0136400 Rhododendron simsii HOM05D006150 ORTHO05D007745 1.3e-139 500.0 295 80.3
Hma1.2p1_0570F.1_g180430 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 2.2e-139 499.2 288 81.6
Duzib084G0008 Durio zibethinus HOM05D006150 ORTHO05D007745 5.5e-138 494.6 305 76.4
COL.COLO4_07285 Corchorus olitorius HOM05D006150 ORTHO05D007745 9.3e-138 493.8 309 77.7
Ciclev10021365m.g Citrus clementina HOM05D006150 ORTHO05D007745 3.5e-137 491.9 302 76.2
Sopen08g026350 Solanum pennellii HOM05D006150 ORTHO05D007745 6.0e-137 491.1 296 78.7
PGSC0003DMG400026243 Solanum tuberosum HOM05D006150 ORTHO05D007745 6.0e-137 491.1 296 78.4
Solyc08g077840.3 Solanum lycopersicum HOM05D006150 ORTHO05D007745 1.0e-136 490.3 307 76.5
CANSAT21G0710 Cannabis sativa HOM05D006150 ORTHO05D007745 1.3e-136 490.0 304 77.3
FAN04G1813 Fragaria x ananassa HOM05D006150 ORTHO05D007745 1.8e-136 489.6 296 79.4
QL12p008732 Quercus lobata HOM05D006150 ORTHO05D007745 2.3e-136 489.2 408 63.7
Potri.003G083600 Populus trichocarpa HOM05D006150 ORTHO05D007745 3.9e-136 488.4 303 78.9
Cc08_g11330 Coffea canephora HOM05D006150 ORTHO05D007745 6.7e-136 487.6 296 78.0
ClCG10G005070 Citrullus lanatus HOM05D006150 ORTHO05D007745 8.7e-136 487.3 294 77.9
Lj8A277T42 Lonicera japonica HOM05D006150 ORTHO05D007745 1.1e-135 486.9 287 78.7
MBI04_g13858_MAGBIO Magnolia biondii HOM05D006150 ORTHO05D007745 1.5e-135 486.5 292 77.7
FvH4_5g20400 Fragaria vesca HOM05D006150 ORTHO05D007745 1.9e-135 486.1 299 78.3
FAN08G0760 Fragaria x ananassa HOM05D006150 ORTHO05D007745 4.3e-135 485.0 290 80.3
MD04G1055500 Malus domestica HOM05D006150 ORTHO05D007745 5.7e-135 484.6 295 79.0
Manes.01G089000 Manihot esculenta HOM05D006150 ORTHO05D007745 5.7e-135 484.6 298 78.5
CAN.G572.11 Capsicum annuum HOM05D006150 ORTHO05D007745 7.4e-135 484.2 297 78.5
TWI60G0542 Tripterygium wilfordii HOM05D006150 ORTHO05D007745 9.6e-135 483.8 293 77.1
MSTRG.6640 Avicennia marina HOM05D006150 ORTHO05D007745 8.2e-134 480.7 295 77.3
CsaV3_3G004750 Cucumis sativus L. HOM05D006150 ORTHO05D007745 1.1e-133 480.3 294 76.9
CARHR223610 Cardamine hirsuta HOM05D006150 ORTHO05D007745 2.4e-133 479.2 295 76.9
PSO675G6476 Papaver somniferum HOM05D006150 ORTHO05D007745 2.4e-133 479.2 296 78.0
THA.LOC104807929 Tarenaya hassleriana HOM05D006150 ORTHO05D007745 9.0e-133 477.2 294 76.5
Atru.chr9.1206 Acer truncatum HOM05D006150 ORTHO05D007745 1.2e-132 476.9 302 74.8
Eucgr.D02133 Eucalyptus grandis HOM05D006150 ORTHO05D007745 2.6e-132 475.7 302 76.5
PSO732G0290 Papaver somniferum HOM05D006150 ORTHO05D007745 2.6e-132 475.7 297 77.4
EL10Ac5g12270 Beta vulgaris HOM05D006150 ORTHO05D007745 3.4e-132 475.3 294 78.9
AT4G17050 Arabidopsis thaliana HOM05D006150 ORTHO05D007745 4.5e-132 474.9 298 76.2
SalBow7G3619 Salvia bowleyana HOM05D006150 ORTHO05D007745 4.5e-132 474.9 298 75.2
BraA03t14117Z Brassica rapa HOM05D006150 ORTHO05D007745 1.3e-131 473.4 296 76.7
Nn6g33757 Nelumbo nucifera HOM05D006150 ORTHO05D007745 1.7e-131 473.0 287 77.7
BcaNung04656 Brassica carinata HOM05D006150 ORTHO05D007745 5.0e-131 471.5 296 76.4
DCAR_008330 Daucus carota HOM05D006150 ORTHO05D007745 5.0e-131 471.5 298 76.5
AL7G37660 Arabidopsis lyrata HOM05D006150 ORTHO05D007745 8.4e-131 470.7 298 75.8
A03p50280 Brassica napus HOM05D006150 ORTHO05D007745 8.4e-131 470.7 296 76.4
Carub.0007s2437 Capsella rubella HOM05D006150 ORTHO05D007745 8.4e-131 470.7 295 75.6
arahy.Tifrunner.gnm1.ann1.IPM3U6 Arachis hypogaea HOM05D006150 ORTHO05D007745 1.1e-130 470.3 296 76.4
C07p48520 Brassica napus HOM05D006150 ORTHO05D007745 1.4e-130 469.9 296 75.7
BolC7t45360H Brassica oleracea HOM05D006150 ORTHO05D007745 1.4e-130 469.9 296 75.7
arahy.Tifrunner.gnm1.ann1.YY6LCE Arachis hypogaea HOM05D006150 ORTHO05D007745 3.2e-130 468.8 296 76.7
C07p48460 Brassica napus HOM05D006150 ORTHO05D007745 3.2e-130 468.8 296 76.0
BraA01t01953Z Brassica rapa HOM05D006150 ORTHO05D007745 5.5e-130 468.0 302 73.5
Sp7g17140 Schrenkiella parvula HOM05D006150 ORTHO05D007745 5.5e-130 468.0 302 74.8
Sed0022790 Sechium edule HOM05D006150 ORTHO05D007745 9.3e-130 467.2 294 74.5
Ah.12g053980 Amaranthus hybridus HOM05D006150 ORTHO05D007745 2.1e-129 466.1 295 75.3
Glyma.05G066500 Glycine max HOM05D006150 ORTHO05D007745 2.7e-129 465.7 296 74.7
BcaC06g33538 Brassica carinata HOM05D006150 ORTHO05D007745 6.1e-129 464.5 297 75.4
HanXRQChr17g0534011 Helianthus annuus HOM05D006150 ORTHO05D007745 6.1e-129 464.5 295 74.2
C07p48390 Brassica napus HOM05D006150 ORTHO05D007745 2.3e-128 462.6 294 76.2
Glyma.17G148400 Glycine max HOM05D006150 ORTHO05D007745 3.0e-128 462.2 298 74.2
BolC1t02493H Brassica oleracea HOM05D006150 ORTHO05D007745 6.7e-128 461.1 302 73.8
Lalb_Chr09g0329771 Lupinus albus HOM05D006150 ORTHO05D007745 6.7e-128 461.1 293 76.8
CDE12G0966 Ceratophyllum demersum HOM05D006150 ORTHO05D007745 2.5e-127 459.1 291 75.3
Nitab4.5_0000500g0240 Nicotiana tabacum HOM05D006150 ORTHO05D007745 3.3e-127 458.8 299 75.6
ECA234G2169 Erigeron canadensis HOM05D006150 ORTHO05D007745 9.7e-127 457.2 297 72.7
Lj4g0002003 Lotus japonicus HOM05D006150 ORTHO05D007745 9.7e-127 457.2 299 73.9
BcaNung00130 Brassica carinata HOM05D006150 ORTHO05D007745 1.6e-126 456.4 302 73.8
Nitab4.5_0009451g0030 Nicotiana tabacum HOM05D006150 ORTHO05D007745 4.8e-126 454.9 302 74.8
PGR031G0533 Punica granatum HOM05D006150 ORTHO05D007745 4.8e-126 454.9 260 81.2
ATR0665G013 Amborella trichopoda HOM05D006150 ORTHO05D007745 8.2e-126 454.1 296 74.3
Phvul.003G225600 Phaseolus vulgaris HOM05D006150 ORTHO05D007745 1.1e-125 453.8 292 72.6
PSO732G0039 Papaver somniferum HOM05D006150 ORTHO05D007745 5.3e-125 451.4 274 76.6
VMungo0251G1767 Vigna mungo HOM05D006150 ORTHO05D007745 5.3e-125 451.4 293 71.3
TPR.G25747 Trifolium pratense HOM05D006150 ORTHO05D007745 7.7e-124 447.6 298 72.5
Ca_22017_v3 Cicer arietinum L. HOM05D006150 ORTHO05D007745 1.0e-123 447.2 298 72.5
Medtr4g099290 Medicago truncatula HOM05D006150 ORTHO05D007745 3.8e-123 445.3 296 73.0
unitig_746.g26644 Utricularia gibba HOM05D006150 ORTHO05D007745 1.9e-122 443.0 295 70.8
Aqoxy5G02622 Aquilegia oxysepala HOM05D006150 ORTHO05D007745 9.4e-122 440.7 310 69.7
A01p20260 Brassica napus HOM05D006150 ORTHO05D007745 3.6e-121 438.7 290 72.8
Os07g0495000 Oryza sativa ssp. japonica HOM05D006150 ORTHO05D007745 7.9e-121 437.6 305 69.2
Zm00001eb322060 Zea mays HOM05D006150 ORTHO05D007745 3.7e-118 428.7 278 71.2
Peaxi162Scf00301g00519 Petunia axillaris HOM05D006150 ORTHO05D007745 9.1e-117 424.1 286 72.4
Thhalv10026866m.g Eutrema salsugineum HOM05D006150 ORTHO05D007745 1.2e-116 423.7 308 69.5
HPP92_025744 Vanilla planifolia HOM05D006150 ORTHO05D007745 2.6e-116 422.5 294 70.7
Actinidia02195 Actinidia chinensis HOM05D006150 ORTHO05D007745 8.5e-115 417.5 262 76.0
Dinv28876 Davidia involucrata HOM05D006150 ORTHO05D007745 1.6e-113 413.3 247 79.4
Psat4g076080 Pisum sativum HOM05D006150 ORTHO05D007745 2.7e-113 412.5 278 71.6
vmacro00832 Vaccinium macrocarpon HOM05D006150 ORTHO05D007745 1.8e-112 409.8 296 68.6
BcaC09g50439 Brassica carinata HOM05D006150 ORTHO05D007745 1.4e-109 400.2 303 66.7
C01p25410 Brassica napus HOM05D006150 ORTHO05D007745 1.4e-109 400.2 303 66.7
Aa31LG2G13130 Aethionema arabicum HOM05D006150 ORTHO05D007745 9.1e-109 397.5 322 62.7
SEGI_33649 Sequoiadendron giganteum HOM05D006150 ORTHO05D007745 7.7e-108 394.4 282 68.8
Sc01g0007980 Simmondsia chinensis HOM05D006150 ORTHO05D007745 2.9e-107 392.5 244 76.6
Prupe.5G055300 Prunus persica HOM05D006150 ORTHO05D007745 1.6e-105 386.7 212 85.4
Oeu012348.1 Olea europaea HOM05D006150 ORTHO05D007745 6.3e-102 374.8 211 82.9
Pp3c9_12580 Physcomitrium patens HOM05D006150 ORTHO05D007745 1.1e-98 364.0 299 60.9
GSVIVG01003685001 Vitis vinifera HOM05D006150 ORTHO05D007745 1.9e-98 363.2 286 63.6
Mapoly0072s0097 Marchantia polymorpha HOM05D006150 ORTHO05D007745 3.4e-95 352.4 263 62.7
AagrBONN_evm.TU.Sc2ySwM_228.2274 Anthoceros agrestis HOM05D006150 ORTHO05D007745 4.4e-95 352.1 249 68.7
SGA_v2.0_scaffold181G39680 Striga asiatica HOM05D006150 ORTHO05D007745 9.8e-95 350.9 243 73.7
AUR62007167 Chenopodium quinoa HOM05D006150 ORTHO05D007745 1.7e-91 340.1 202 80.7
AUR62018839 Chenopodium quinoa HOM05D006150 ORTHO05D007745 3.8e-91 339.0 202 79.2
Lsat_1_v5_gn_3_15361 Lactuca sativa HOM05D006150 ORTHO05D007745 5.5e-90 335.1 251 68.1
Actinidia25909 Actinidia chinensis HOM05D006150 ORTHO05D007745 2.3e-75 286.6 294 54.1
Potri.001G150800 Populus trichocarpa HOM05D006150 ORTHO05D007745 3.1e-72 276.2 202 68.8
MCO07G379 Micromonas commoda HOM05D006150 ORTHO05D007745 1.3e-67 260.8 318 44.0
Cre06.g290000 Chlamydomonas reinhardtii HOM05D006150 ORTHO05D007745 8.6e-67 258.1 258 50.4
MD06G1047100 Malus domestica HOM05D006150 ORTHO05D007745 6.8e-64 248.4 269 51.7
Sabra01G0120800 Salix brachista HOM05D006150 ORTHO05D007745 9.5e-58 228.0 176 65.9
MELO3C014174.2 Cucumis melo HOM05D006150 ORTHO05D007745 1.7e-54 217.2 287 46.7
MCO04G282 Micromonas commoda HOM05D006150 ORTHO05D007745 1.4e-53 214.2 262 46.9
FAN18G0603 Fragaria x ananassa HOM05D006150 ORTHO05D007745 4.1e-53 212.6 145 73.1
Hma1.2p1_0570F.1_g180440 Hydrangea macrophylla HOM05D006150 ORTHO05D007745 1.2e-52 211.1 129 76.7
CSS0048254 Camellia sinensis var. sinensis HOM05D006150 ORTHO05D007745 1.4e-40 171.0 97 83.5
Sabra01G0120600 Salix brachista HOM05D006150 ORTHO05D007745 1.2e-36 157.9 162 54.9
PSO717G0125 Papaver somniferum HOM05D006150 ORTHO05D007745 1.5e-34 151.0 99 74.7
Cpa.g.sc98.38 Carica papaya HOM05D006150 ORTHO05D007745 4.5e-31 139.4 81 76.5
BcaC01g03436 Brassica carinata HOM05D006150 ORTHO05D007745 4.9e-30 136.0 105 62.9
CBR_g38093 Chara braunii HOM05D006150 ORTHO05D007745 9.3e-29 131.7 66 84.8
GSVIVG01021810001 Vitis vinifera HOM05D006150 ORTHO05D007745 1.4e-16 91.3 67 67.2
Cpa.g.sc98.35 Carica papaya HOM05D006150 ORTHO05D007745 5.3e-16 89.4 56 76.8
Oeu040463.1 Olea europaea HOM05D001574 ORTHO05D000708 1.3e-14 84.7 57 70.2
Lsat_1_v5_gn_6_74120 Lactuca sativa HOM05D006150 ORTHO05D233887 6.9e-08 62.4 33 78.8
MELO3C000773.2 Cucumis melo HOM05D006150 ORTHO05D007745 5.0e-06 56.2 39 69.2


User provided reference genes

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