Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 7.7e-211 736.9 370 100.0
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 8.6e-186 653.7 370 90.0
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 2.4e-175 619.0 368 85.1
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 7.1e-164 580.9 363 80.4
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 1.3e-162 576.6 361 79.5
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 3.9e-162 575.1 361 79.2
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.9e-161 572.8 362 77.9
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 4.3e-161 571.6 369 78.0
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 4.8e-160 568.2 362 77.3
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 3.4e-158 562.0 361 77.3
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 1.4e-156 556.6 397 70.8
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 1.4e-156 556.6 361 76.7
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 3.2e-156 555.4 358 75.7
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 1.6e-155 553.1 371 73.6
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 6.0e-155 551.2 353 77.9
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.0e-154 550.4 362 76.0
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 2.5e-153 545.8 362 73.8
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 1.3e-152 543.5 362 74.6
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 3.7e-152 542.0 364 73.9
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 3.1e-151 538.9 366 73.2
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 6.9e-151 537.7 362 72.9
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 6.5e-149 531.2 355 74.1
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 8.4e-149 530.8 362 73.8
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 1.1e-148 530.4 362 71.5
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 1.9e-148 529.6 362 71.3
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 7.1e-148 527.7 359 73.8
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 2.1e-147 526.2 367 70.0
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 2.7e-147 525.8 367 71.9
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 4.6e-147 525.0 367 71.7
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 6.0e-147 524.6 362 71.0
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 1.8e-146 523.1 362 71.5
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 2.3e-146 522.7 356 73.3
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 2.3e-146 522.7 350 71.7
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 3.0e-146 522.3 368 71.5
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 3.0e-146 522.3 368 71.5
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 3.0e-146 522.3 368 71.5
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 6.7e-146 521.2 361 70.9
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 6.7e-146 521.2 361 73.4
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 1.1e-145 520.4 354 72.0
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 3.3e-145 518.8 356 72.5
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 9.6e-145 517.3 351 73.5
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 1.8e-143 513.1 356 72.2
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 1.8e-143 513.1 352 72.4
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 2.4e-143 512.7 351 72.6
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 5.3e-143 511.5 324 76.2
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 3.4e-142 508.8 318 80.5
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 4.5e-142 508.4 350 72.3
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 5.8e-142 508.1 324 76.5
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 7.6e-142 507.7 371 71.4
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 1.3e-141 506.9 353 70.3
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 1.7e-141 506.5 351 71.5
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 2.2e-141 506.1 363 69.1
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 2.2e-141 506.1 365 69.3
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 1.1e-140 503.8 355 71.8
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 1.1e-140 503.8 365 68.5
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 1.4e-140 503.4 353 70.8
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 1.4e-140 503.4 364 68.7
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 3.2e-140 502.3 318 78.6
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 2.1e-139 499.6 351 71.2
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 3.5e-139 498.8 355 70.1
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 4.6e-139 498.4 360 70.3
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 6.1e-139 498.0 355 69.6
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 1.0e-138 497.3 359 66.9
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 1.3e-138 496.9 354 69.5
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 1.1e-137 493.8 362 68.8
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 9.7e-137 490.7 362 69.3
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 3.7e-136 488.8 397 64.2
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.1e-135 487.3 415 61.4
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 4.1e-135 485.3 362 66.9
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 1.3e-133 480.3 359 66.6
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 6.5e-133 478.0 351 66.4
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 2.0e-129 466.5 354 65.5
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 1.0e-125 454.1 315 72.4
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 1.3e-125 453.8 290 79.0
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 1.4e-124 450.3 351 61.5
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 5.5e-124 448.4 325 68.0
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.2e-123 447.2 362 62.7
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 1.1e-121 440.7 362 60.8
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 2.0e-121 439.9 357 60.2
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 3.8e-117 425.6 356 62.1
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 5.5e-108 395.2 247 81.4
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 7.7e-102 374.8 232 79.3
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 3.2e-100 369.4 351 55.0
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 4.0e-98 362.5 345 53.0
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 2.0e-97 360.1 342 51.2
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 7.5e-97 358.2 350 56.0
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.3e-93 347.4 329 54.4
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 1.9e-84 317.0 336 48.8
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 5.0e-77 292.4 212 70.8
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 6.8e-74 282.0 304 53.3
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 4.7e-67 259.2 187 68.4
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 1.3e-64 251.1 489 34.6
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 2.9e-64 250.0 179 69.3
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 4.0e-42 176.4 169 56.2
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 5.3e-42 176.0 130 62.3
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 5.3e-42 176.0 130 62.3
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 1.2e-33 148.3 261 36.0
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 1.4e-31 141.4 163 48.5
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 9.3e-23 112.1 74 77.0
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 7.4e-20 102.4 91 50.5
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 2.0e-17 94.4 90 46.7
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 1.4e-15 88.2 86 45.3
Dinv27585 Davidia involucrata HOM05D007339 ORTHO05D009302 3.9e-13 80.1 55 78.2
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 8.5e-08 62.4 61 50.8


User provided reference genes

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