Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 9.0e-91 337.0 187 100.0
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 1.6e-58 229.9 181 68.5
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 1.6e-55 219.9 202 64.4
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 1.6e-55 219.9 202 64.4
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 9.1e-51 204.1 181 64.1
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 1.0e-49 200.7 185 67.6
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 1.0e-49 200.7 185 67.6
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 1.5e-40 170.2 167 56.3
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 2.8e-39 166.0 167 55.7
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 7.8e-34 147.9 168 51.2
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 1.3e-33 147.1 176 47.7
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 3.0e-33 146.0 168 50.0
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 5.6e-32 141.7 189 43.9
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 1.2e-31 140.6 179 46.9
Dinv08500 Davidia involucrata HOM05D010605 ORTHO05D010031 1.6e-26 123.6 159 45.9
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 8.6e-25 117.9 190 40.5
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 2.8e-23 112.8 160 40.0
SGA_v2.0_scaffold173G39118 Striga asiatica HOM05D010605 ORTHO05D010031 1.7e-20 103.6 167 36.5
Oeu042370.1 Olea europaea HOM05D010605 ORTHO05D010031 1.1e-19 100.9 182 40.1
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 4.6e-18 95.5 180 33.3
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 6.2e-15 85.1 201 30.3
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 1.4e-14 84.0 189 32.3
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 1.9e-11 73.6 216 28.7
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 4.1e-11 72.4 162 29.6
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 7.1e-11 71.6 209 27.8
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 2.7e-10 69.7 164 30.5
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 2.7e-10 69.7 73 46.6
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 6.0e-10 68.6 99 38.4
Cfa016331 Carpinus fangiana HOM05D015404 ORTHO05D011570 7.8e-10 68.2 168 27.4
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 7.8e-10 68.2 200 28.5
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 1.7e-09 67.0 84 41.7
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 2.3e-09 66.6 87 41.4
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 3.0e-09 66.2 198 29.3
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 3.0e-09 66.2 216 25.9
QL09p011993 Quercus lobata HOM05D015404 ORTHO05D011570 5.1e-09 65.5 170 26.5
Pp3c8_14250 Physcomitrium patens HOM05D011172 ORTHO05D010031 1.1e-08 64.3 166 30.1
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 1.1e-08 64.3 216 25.9
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 3.3e-08 62.8 83 38.6
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 4.3e-08 62.4 80 42.5
Thecc.03G188800 Theobroma cacao HOM05D015404 ORTHO05D010031 7.3e-08 61.6 101 34.7
Manes.16G117600 Manihot esculenta HOM05D017842 ORTHO05D020741 1.2e-07 60.8 161 26.1
Sopen08g021610 Solanum pennellii HOM05D031006 ORTHO05D030675 1.2e-07 60.8 92 37.0
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 2.1e-07 60.1 68 48.5
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 2.8e-07 59.7 63 50.8
FAN06G0580 Fragaria x ananassa HOM05D017842 ORTHO05D020741 4.7e-07 58.9 162 26.5
Haze_16765 Corylus avellana HOM05D015404 ORTHO05D011570 6.2e-07 58.5 94 31.9
FAN10G0836 Fragaria x ananassa HOM05D017842 ORTHO05D020741 6.2e-07 58.5 86 31.4
Pp3c22_6890 Physcomitrium patens HOM05D011172 ORTHO05D010031 6.2e-07 58.5 78 34.6
Pp3c22_6902 Physcomitrium patens HOM05D011172 ORTHO05D010031 6.2e-07 58.5 95 33.7
Prupe.1G470500 Prunus persica HOM05D010238 ORTHO05D010031 6.2e-07 58.5 69 46.4
CiPaw.08G129800 Carya illinoinensis HOM05D015404 ORTHO05D011570 1.1e-06 57.8 175 25.1
CiPaw.05G259800 Carya illinoinensis HOM05D015404 ORTHO05D011570 3.1e-06 56.2 164 24.4
Pp3c3_23280 Physcomitrium patens HOM05D011172 ORTHO05D010031 3.1e-06 56.2 79 36.7
Pp3c21_11690 Physcomitrium patens HOM05D011172 ORTHO05D010031 4.0e-06 55.8 108 30.6
RcHm_v2.0_Chr1g0379631 Rosa chinensis HOM05D015404 ORTHO05D011570 5.2e-06 55.5 91 31.9
Gohir.D12G254800 Gossypium hirsutum HOM05D015404 ORTHO05D011570 8.9e-06 54.7 116 27.6


User provided reference genes

Program Settings