Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012264 Carpinus fangiana HOM05D010605 ORTHO05D010031 3.1e-99 365.2 186 100.0
Haze_08724 Corylus avellana HOM05D010605 ORTHO05D010031 2.0e-74 282.7 182 82.4
Haze_08727 Corylus avellana HOM05D010605 ORTHO05D010031 2.0e-74 282.7 182 82.4
Haze_08725 Corylus avellana HOM05D010605 ORTHO05D010031 2.3e-70 269.2 196 72.4
Haze_08723 Corylus avellana HOM05D010605 ORTHO05D010031 3.9e-70 268.5 196 71.9
Haze_08721 Corylus avellana HOM05D010605 ORTHO05D010031 8.2e-60 234.2 191 66.0
Cfa012265 Carpinus fangiana HOM05D010605 ORTHO05D010031 7.0e-51 204.5 181 64.1
CiPaw.12G087400 Carya illinoinensis HOM05D010605 ORTHO05D010031 2.5e-48 196.1 171 60.8
CiPaw.12G087500 Carya illinoinensis HOM05D010605 ORTHO05D010031 6.7e-46 188.0 175 57.1
CiPaw.11G127100 Carya illinoinensis HOM05D010605 ORTHO05D010031 5.5e-40 168.3 165 53.9
CiPaw.11G127200 Carya illinoinensis HOM05D010605 ORTHO05D010031 9.4e-40 167.5 166 53.0
Hma1.2p1_0216F.1_g091240 Hydrangea macrophylla HOM05D010605 ORTHO05D010031 2.7e-39 166.0 187 46.5
Dinv37573 Davidia involucrata HOM05D010605 ORTHO05D010031 4.4e-37 158.7 176 47.2
SGA_v2.0_scaffold173G39118 Striga asiatica HOM05D010605 ORTHO05D010031 1.2e-31 140.6 166 44.0
Lj8P215T31 Lonicera japonica HOM05D010605 ORTHO05D010031 1.6e-31 140.2 175 40.6
CSS0007858 Camellia sinensis var. sinensis HOM05D010605 ORTHO05D010031 2.1e-31 139.8 182 44.0
QL02p032625 Quercus lobata HOM05D010605 ORTHO05D010031 2.1e-31 139.8 171 46.2
Dinv08500 Davidia involucrata HOM05D010605 ORTHO05D010031 5.7e-29 131.7 159 46.5
Oeu042370.1 Olea europaea HOM05D010605 ORTHO05D010031 1.3e-28 130.6 183 41.5
Actinidia28329 Actinidia chinensis HOM05D010605 ORTHO05D010031 2.8e-28 129.4 160 41.9
Ciclev10010677m.g Citrus clementina HOM05D010238 ORTHO05D010031 5.2e-14 82.0 190 30.5
Solyc08g067700.1 Solanum lycopersicum HOM05D010238 ORTHO05D010031 5.8e-13 78.6 222 27.5
CDE10G0521 Ceratophyllum demersum HOM05D003548 ORTHO05D004066 9.8e-13 77.8 157 29.3
Nitab4.5_0003117g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 9.8e-13 77.8 197 28.9
Prupe.1G469500 Prunus persica HOM05D010238 ORTHO05D010031 4.9e-12 75.5 204 31.4
Cfa016331 Carpinus fangiana HOM05D015404 ORTHO05D011570 1.1e-11 74.3 170 28.2
FAN10G1930 Fragaria x ananassa HOM05D010238 ORTHO05D010031 1.2e-10 70.9 180 31.1
Prupe.1G469600 Prunus persica HOM05D010238 ORTHO05D010031 1.6e-10 70.5 200 28.5
Prupe.1G469800 Prunus persica HOM05D010238 ORTHO05D010031 4.6e-10 68.9 225 27.1
FAN06G3436 Fragaria x ananassa HOM05D010238 ORTHO05D010031 2.3e-09 66.6 164 29.9
Nitab4.5_0000125g0370 Nicotiana tabacum HOM05D010238 ORTHO05D010031 3.3e-08 62.8 78 41.0
Prupe.1G470100 Prunus persica HOM05D010238 ORTHO05D010031 3.3e-08 62.8 211 26.1
Prupe.1G470600 Prunus persica HOM05D010238 ORTHO05D010031 4.3e-08 62.4 213 25.8
Manes.16G117600 Manihot esculenta HOM05D017842 ORTHO05D020741 5.6e-08 62.0 160 26.2
Oeu027789.1 Olea europaea HOM05D010238 ORTHO05D010031 5.6e-08 62.0 165 29.1
MD15G1111300 Malus domestica HOM05D010238 ORTHO05D010031 7.3e-08 61.6 215 24.2
Pp3c8_14250 Physcomitrium patens HOM05D011172 ORTHO05D010031 1.6e-07 60.5 174 25.9
Prupe.1G470400 Prunus persica HOM05D010238 ORTHO05D010031 2.1e-07 60.1 209 25.4
FAN06G0580 Fragaria x ananassa HOM05D017842 ORTHO05D020741 2.8e-07 59.7 168 26.2
Actinidia13276 Actinidia chinensis HOM05D010238 ORTHO05D010031 3.6e-07 59.3 90 36.7
Nitab4.5_0007456g0010 Nicotiana tabacum HOM05D010238 ORTHO05D010031 3.6e-07 59.3 78 39.7
Migut.A00288 Erythranthe guttata HOM05D007454 ORTHO05D009382 6.2e-07 58.5 65 47.7
Thecc.03G188800 Theobroma cacao HOM05D015404 ORTHO05D010031 6.2e-07 58.5 88 34.1
Hma1.2p1_0175F.1_g077090 Hydrangea macrophylla HOM05D010238 ORTHO05D010031 1.1e-06 57.8 92 32.6
Prupe.1G470500 Prunus persica HOM05D010238 ORTHO05D010031 5.2e-06 55.5 69 44.9
FAN10G0836 Fragaria x ananassa HOM05D017842 ORTHO05D020741 6.8e-06 55.1 92 31.5
TPR.G23939 Trifolium pratense HOM05D010238 ORTHO05D010031 8.9e-06 54.7 115 31.3


User provided reference genes

Program Settings