Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa012146 Carpinus fangiana HOM05D011589 ORTHO05D011378 2.1e-33 145.2 77 100.0
Haze_08886 Corylus avellana HOM05D011589 ORTHO05D011378 2.1e-25 118.6 67 94.0
Haze_08889 Corylus avellana HOM05D011589 ORTHO05D011378 6.0e-25 117.1 67 92.5
Ciclev10023197m.g Citrus clementina HOM05D011589 ORTHO05D011378 5.7e-15 84.0 79 67.1
Potri.003G124433 Populus trichocarpa HOM05D011589 ORTHO05D011378 3.4e-12 74.7 77 61.0
Gohir.A09G192900 Gossypium hirsutum HOM05D011589 ORTHO05D011378 3.8e-11 71.2 78 55.1
Gorai.006G209900 Gossypium raimondii HOM05D011589 ORTHO05D011378 5.0e-11 70.9 78 55.1
Gohir.D09G187100 Gossypium hirsutum HOM05D011589 ORTHO05D011378 8.5e-11 70.1 78 55.1
Thecc.03G275600 Theobroma cacao HOM05D011589 ORTHO05D011378 1.4e-10 69.3 78 55.1
Gorai.004G209800 Gossypium raimondii HOM05D011589 ORTHO05D011378 2.7e-09 65.1 78 48.7
Gohir.D08G199000 Gossypium hirsutum HOM05D011589 ORTHO05D011378 3.6e-09 64.7 78 48.7
Gohir.A08G180200 Gossypium hirsutum HOM05D011589 ORTHO05D011378 6.1e-09 63.9 78 48.7
COL.COLO4_34429 Corchorus olitorius HOM05D011589 ORTHO05D011378 7.9e-09 63.5 79 53.2
Gohir.D03G152500 Gossypium hirsutum HOM05D011589 ORTHO05D011378 3.3e-07 58.2 77 50.6
AL1G24440 Arabidopsis lyrata HOM05D011236 ORTHO05D011378 9.7e-07 56.6 76 51.3
Gorai.003G160100 Gossypium raimondii HOM05D011589 ORTHO05D011378 1.3e-06 56.2 81 48.1
Duzib068G1438 Durio zibethinus HOM05D011589 ORTHO05D011378 1.7e-06 55.8 62 59.7
Sp1g11370 Schrenkiella parvula HOM05D011236 ORTHO05D011378 1.7e-06 55.8 76 48.7
ClCG01G002920 Citrullus lanatus HOM05D025840 ORTHO05D028945 3.7e-06 54.7 77 46.8
Glyma.08G012900 Glycine max HOM05D015259 ORTHO05D017981 3.7e-06 54.7 80 43.8


User provided reference genes

Program Settings