Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa011970 Carpinus fangiana HOM05D003472 ORTHO05D016557 5.2e-136 487.6 234 100.0
Cfa011954 Carpinus fangiana HOM05D003472 ORTHO05D016557 1.2e-84 317.0 291 60.8
Haze_09124 Corylus avellana HOM05D000007 ORTHO05D016557 6.2e-81 304.7 275 61.1
Haze_09105 Corylus avellana HOM05D003895 ORTHO05D004723 3.1e-64 249.2 276 54.3
Cfa011958 Carpinus fangiana HOM05D000007 ORTHO05D016557 4.8e-49 198.7 346 39.3
Cfa004925 Carpinus fangiana HOM05D003472 ORTHO05D016557 9.4e-29 131.3 182 42.3
Cfa011956 Carpinus fangiana HOM05D003472 ORTHO05D016557 1.8e-24 117.1 69 79.7
Dinv23704 Davidia involucrata HOM05D000007 ORTHO05D000039 2.3e-14 83.6 354 26.8
CiPaw.14G115500 Carya illinoinensis HOM05D000007 ORTHO05D003666 2.3e-11 73.6 153 35.3
vmacro12403 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 2.3e-11 73.6 193 28.5
Migut.M00311 Erythranthe guttata HOM05D000007 ORTHO05D000039 4.0e-11 72.8 335 25.7
QL04p019070 Quercus lobata HOM05D000007 ORTHO05D000039 4.0e-11 72.8 270 27.8
Migut.M00315 Erythranthe guttata HOM05D000007 ORTHO05D000039 1.2e-10 71.2 220 30.0
Migut.M00317 Erythranthe guttata HOM05D000007 ORTHO05D000039 1.5e-10 70.9 334 25.1
Thecc.01G095000 Theobroma cacao HOM05D000007 ORTHO05D000017 2.0e-10 70.5 331 25.4
Manes.07G010000 Manihot esculenta HOM05D000007 ORTHO05D000039 2.6e-10 70.1 326 27.0
Migut.M00314 Erythranthe guttata HOM05D000007 ORTHO05D000039 3.4e-10 69.7 353 25.2
FAN05G5128 Fragaria x ananassa HOM05D004117 ORTHO05D004520 5.7e-10 68.9 300 25.3
Peaxi162Scf00608g00323 Petunia axillaris HOM05D000007 ORTHO05D000039 7.5e-10 68.6 202 32.7
CSS0017530 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 9.8e-10 68.2 216 29.2
Migut.M00320 Erythranthe guttata HOM05D000007 ORTHO05D000039 9.8e-10 68.2 338 24.9
Actinidia07889 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.7e-09 67.4 216 28.2
Migut.M00309 Erythranthe guttata HOM05D000007 ORTHO05D000039 1.7e-09 67.4 299 27.1
Peaxi162Scf00608g00048 Petunia axillaris HOM05D000007 ORTHO05D000039 1.7e-09 67.4 232 28.9
Nn1g03289 Nelumbo nucifera HOM05D000007 ORTHO05D000017 2.2e-09 67.0 316 26.3
Nitab4.5_0009868g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 2.2e-09 67.0 230 28.3
Lj1P664T31 Lonicera japonica HOM05D000007 ORTHO05D000039 2.8e-09 66.6 234 26.9
Dinv12703 Davidia involucrata HOM05D000007 ORTHO05D000039 3.7e-09 66.2 342 23.4
Lj1C664T4 Lonicera japonica HOM05D000007 ORTHO05D000039 3.7e-09 66.2 190 27.4
AUR62014756 Chenopodium quinoa HOM05D000007 ORTHO05D000017 8.3e-09 65.1 272 26.1
QL08p040393 Quercus lobata HOM05D000007 ORTHO05D000039 8.3e-09 65.1 228 28.5
FvH4_3g16860 Fragaria vesca HOM05D000007 ORTHO05D000039 1.1e-08 64.7 219 27.9
Nitab4.5_0000635g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000039 1.1e-08 64.7 220 28.6
Rhsim07G0005800 Rhododendron simsii HOM05D000007 ORTHO05D000039 1.4e-08 64.3 206 25.7
Actinidia11172 Actinidia chinensis HOM05D000007 ORTHO05D000039 1.8e-08 63.9 190 25.3
Hma1.2p1_0036F.1_g023650 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 3.1e-08 63.2 240 24.6
Lj1P591T21 Lonicera japonica HOM05D000007 ORTHO05D000039 3.1e-08 63.2 239 23.8
Aqoxy5G00924 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 4.1e-08 62.8 161 32.9
Hma1.2p1_0036F.1_g023680 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 4.1e-08 62.8 260 24.2
Lj1P794T16 Lonicera japonica HOM05D000007 ORTHO05D000039 4.1e-08 62.8 216 25.9
TAR626G0901 Trochodendron aralioides HOM05D000007 ORTHO05D000017 4.1e-08 62.8 330 24.8
EL10As6g23638 Beta vulgaris HOM05D000007 ORTHO05D000017 5.4e-08 62.4 307 23.8
Haze_13252 Corylus avellana HOM05D000007 ORTHO05D000039 5.4e-08 62.4 217 24.0
Migut.F01555 Erythranthe guttata HOM05D000007 ORTHO05D000017 5.4e-08 62.4 199 26.1
Gorai.011G135900 Gossypium raimondii HOM05D000007 ORTHO05D000039 7.0e-08 62.0 189 29.1
Lj5P299T4 Lonicera japonica HOM05D000007 ORTHO05D000039 7.0e-08 62.0 222 25.7
Actinidia09174 Actinidia chinensis HOM05D000007 ORTHO05D000017 9.2e-08 61.6 189 30.2
Duzib268G1877 Durio zibethinus HOM05D000007 ORTHO05D000039 9.2e-08 61.6 214 26.2
Hma1.2p1_0036F.1_g023670 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.2e-07 61.2 239 24.3
RcHm_v2.0_Chr2g0131341 Rosa chinensis HOM05D000007 ORTHO05D000039 1.2e-07 61.2 215 26.0
Migut.M00319 Erythranthe guttata HOM05D000007 ORTHO05D000039 1.6e-07 60.8 242 27.3
MD17G1227400 Malus domestica HOM05D000007 ORTHO05D000039 1.6e-07 60.8 203 28.1
PGSC0003DMG402021671 Solanum tuberosum HOM05D000007 ORTHO05D000039 1.6e-07 60.8 221 27.6
CAN.G1374.17 Capsicum annuum HOM05D000007 ORTHO05D000017 2.0e-07 60.5 188 27.7
Medtr8g433030 Medicago truncatula HOM05D000007 ORTHO05D000017 2.0e-07 60.5 184 27.7
Dinv15480 Davidia involucrata HOM05D000007 ORTHO05D000039 2.7e-07 60.1 237 26.2
Dinv41267 Davidia involucrata HOM05D000007 ORTHO05D000039 2.7e-07 60.1 233 24.9
Thecc.06G234200 Theobroma cacao HOM05D000007 ORTHO05D000017 2.7e-07 60.1 191 27.7
TWI31G0212 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 2.7e-07 60.1 203 27.6
Lj1C674T7 Lonicera japonica HOM05D000007 ORTHO05D000039 3.5e-07 59.7 217 23.0
Potri.001G262900 Populus trichocarpa HOM05D000007 ORTHO05D000039 3.5e-07 59.7 330 24.5
Lj1P669T8 Lonicera japonica HOM05D000007 ORTHO05D000039 7.8e-07 58.5 221 25.8
Lj1P672T29 Lonicera japonica HOM05D000007 ORTHO05D000039 7.8e-07 58.5 221 25.8
Haze_09499 Corylus avellana HOM05D000007 ORTHO05D000039 1.0e-06 58.2 206 26.7
Gohir.A08G015500 Gossypium hirsutum HOM05D000007 ORTHO05D000017 1.0e-06 58.2 310 24.2
CiPaw.04G017800 Carya illinoinensis HOM05D000007 ORTHO05D000039 1.3e-06 57.8 194 26.3
Migut.F01560 Erythranthe guttata HOM05D000007 ORTHO05D000017 1.3e-06 57.8 195 25.1
FvH4_6g40002 Fragaria vesca HOM05D000007 ORTHO05D000017 1.3e-06 57.8 226 26.5
CSS0048184 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.7e-06 57.4 212 27.4
Cc05_g08680 Coffea canephora HOM05D000007 ORTHO05D000039 1.7e-06 57.4 365 21.4
Lj8C445T0 Lonicera japonica HOM05D000007 ORTHO05D000039 1.7e-06 57.4 94 36.2
Lj9C1G0 Lonicera japonica HOM05D000007 ORTHO05D000039 1.7e-06 57.4 202 28.7
FAN09G2562 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.3e-06 57.0 209 25.4
FAN09G3937 Fragaria x ananassa HOM05D000007 ORTHO05D000039 2.3e-06 57.0 209 25.4
Gorai.004G022100 Gossypium raimondii HOM05D000007 ORTHO05D000017 2.3e-06 57.0 313 24.9
Lj1P667T11 Lonicera japonica HOM05D000007 ORTHO05D000039 2.3e-06 57.0 201 26.4
Manes.03G115800 Manihot esculenta HOM05D000007 ORTHO05D000039 2.3e-06 57.0 110 30.9
Haze_05766 Corylus avellana HOM05D000007 ORTHO05D000039 2.9e-06 56.6 190 27.4
Haze_13248 Corylus avellana HOM05D000029 ORTHO05D001395 2.9e-06 56.6 114 32.5
Migut.F01563 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.9e-06 56.6 199 25.6
Migut.M00308 Erythranthe guttata HOM05D000007 ORTHO05D000039 2.9e-06 56.6 207 28.5
Gohir.A08G015180 Gossypium hirsutum HOM05D000007 ORTHO05D000017 2.9e-06 56.6 297 24.2
Hma1.2p1_3211F.1_g333990 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 2.9e-06 56.6 199 27.6
Lj8P116T38 Lonicera japonica HOM05D000007 ORTHO05D000039 2.9e-06 56.6 217 26.7
AUR62029087 Chenopodium quinoa HOM05D000007 ORTHO05D000039 3.8e-06 56.2 221 26.2
Migut.M00304 Erythranthe guttata HOM05D000007 ORTHO05D000039 3.8e-06 56.2 227 27.8
Manes.07G011000 Manihot esculenta HOM05D000007 ORTHO05D000039 3.8e-06 56.2 233 22.7
Prupe.4G221400 Prunus persica HOM05D000007 ORTHO05D000039 3.8e-06 56.2 111 35.1
QL07p003148 Quercus lobata HOM05D000007 ORTHO05D000039 3.8e-06 56.2 352 24.4
QL02p078646 Quercus lobata HOM05D000007 ORTHO05D000039 5.0e-06 55.8 220 25.0
vmacro13636 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 5.0e-06 55.8 225 26.2
Aqoxy1G04045 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 6.6e-06 55.5 308 23.4
Cfa004506 Carpinus fangiana HOM05D000257 ORTHO05D004041 6.6e-06 55.5 196 28.1
DCAR_012984 Daucus carota HOM05D000007 ORTHO05D000039 6.6e-06 55.5 201 24.4
FAN15G1935 Fragaria x ananassa HOM05D000007 ORTHO05D000017 6.6e-06 55.5 171 30.4
Lj7A0G37 Lonicera japonica HOM05D000007 ORTHO05D000039 6.6e-06 55.5 281 25.3
GSVIVG01013506001 Vitis vinifera HOM05D000007 ORTHO05D000039 6.6e-06 55.5 314 23.6
Migut.M00313 Erythranthe guttata HOM05D000007 ORTHO05D000039 8.6e-06 55.1 358 25.1
Eucgr.C01783 Eucalyptus grandis HOM05D000007 ORTHO05D000039 8.6e-06 55.1 202 23.8
FAN03G2844 Fragaria x ananassa HOM05D000007 ORTHO05D000039 8.6e-06 55.1 172 28.5
Sc05g0008330 Simmondsia chinensis HOM05D000007 ORTHO05D000017 8.6e-06 55.1 207 24.2
PGSC0003DMG400021672 Solanum tuberosum HOM05D000007 ORTHO05D000039 8.6e-06 55.1 210 27.1
TWI38G0976 Tripterygium wilfordii HOM05D000007 ORTHO05D000017 8.6e-06 55.1 198 24.7


User provided reference genes

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