Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa011912 Carpinus fangiana HOM05D007467 ORTHO05D009441 2.9e-162 575.5 356 100.0
Haze_09186 Corylus avellana HOM05D007467 ORTHO05D009441 2.4e-137 492.7 355 91.3
QL02p027667 Quercus lobata HOM05D007467 ORTHO05D009441 3.1e-100 369.4 370 68.1
Thecc.03G219300 Theobroma cacao HOM05D007467 ORTHO05D009441 7.2e-89 331.6 363 64.5
Duzib205G1912 Durio zibethinus HOM05D007467 ORTHO05D009441 3.6e-88 329.3 366 62.0
Duzib084G1076 Durio zibethinus HOM05D007467 ORTHO05D009441 6.1e-88 328.6 357 57.7
Prupe.5G131500 Prunus persica HOM05D007467 ORTHO05D009441 1.8e-84 317.0 377 61.3
Potri.001G082600 Populus trichocarpa HOM05D007467 ORTHO05D009441 5.5e-81 305.4 370 58.6
Sabra01G0059300 Salix brachista HOM05D007467 ORTHO05D009441 4.1e-76 289.3 371 56.1
Ciclev10020958m.g Citrus clementina HOM05D007467 ORTHO05D009441 9.2e-76 288.1 372 60.5
CSS0030138 Camellia sinensis var. sinensis HOM05D007467 ORTHO05D009441 1.3e-74 284.3 363 55.6
Sabra03G0107500 Salix brachista HOM05D007467 ORTHO05D009441 6.6e-74 282.0 360 58.6
Atru.chr9.1852 Acer truncatum HOM05D007467 ORTHO05D009441 1.5e-73 280.8 366 60.1
FAN04G1879 Fragaria x ananassa HOM05D007467 ORTHO05D009441 2.6e-70 270.0 353 56.7
MD06G1120900 Malus domestica HOM05D007467 ORTHO05D009441 9.8e-70 268.1 360 54.2
Manes.02G001700 Manihot esculenta HOM05D007467 ORTHO05D009441 9.8e-70 268.1 358 52.8
RcHm_v2.0_Chr7g0187371 Rosa chinensis HOM05D007467 ORTHO05D009441 1.4e-68 264.2 328 55.5
FvH4_5g10770 Fragaria vesca HOM05D007467 ORTHO05D009441 1.8e-68 263.8 330 58.8
FAN18G0937 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.8e-68 263.8 330 58.8
FAN13G1608 Fragaria x ananassa HOM05D007467 ORTHO05D009441 3.2e-68 263.1 355 55.5
MD14G1137500 Malus domestica HOM05D007467 ORTHO05D009441 3.2e-68 263.1 357 48.5
FAN08G2920 Fragaria x ananassa HOM05D007467 ORTHO05D009441 1.2e-67 261.2 333 58.3
Peaxi162Scf00074g00113 Petunia axillaris HOM05D007467 ORTHO05D009441 1.2e-67 261.2 360 55.3
Oeu013372.1 Olea europaea HOM05D007467 ORTHO05D009441 2.0e-67 260.4 351 54.1
CAN.G567.94 Capsicum annuum HOM05D007467 ORTHO05D009441 6.2e-64 248.8 357 53.8
TAR629G1879 Trochodendron aralioides HOM05D007467 ORTHO05D009441 3.4e-62 243.0 345 59.4
Oeu042839.1 Olea europaea HOM05D007467 ORTHO05D009441 7.5e-62 241.9 348 53.2
PGSC0003DMG400012234 Solanum tuberosum HOM05D007467 ORTHO05D009441 2.0e-59 233.8 354 51.4
Gohir.A12G240800 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.0e-58 231.5 334 47.9
Dinv18747 Davidia involucrata HOM05D007467 ORTHO05D009441 5.0e-58 229.2 325 55.1
TWI60G0745 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 6.6e-58 228.8 352 51.1
MSTRG.13707 Avicennia marina HOM05D007467 ORTHO05D009441 8.6e-58 228.4 364 51.6
Cc08_g16860 Coffea canephora HOM05D007467 ORTHO05D009441 2.5e-57 226.9 352 50.6
Lj2P155T22 Lonicera japonica HOM05D007467 ORTHO05D009441 5.6e-57 225.7 341 55.7
Gohir.D12G242100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 7.3e-57 225.3 360 45.3
Gorai.008G259400 Gossypium raimondii HOM05D007467 ORTHO05D009441 7.3e-57 225.3 330 47.3
TAR636G1420 Trochodendron aralioides HOM05D007467 ORTHO05D009441 4.7e-56 222.6 345 47.8
HanXRQChr07g0192371 Helianthus annuus HOM05D007467 ORTHO05D009441 8.1e-56 221.9 329 55.0
DCAR_006558 Daucus carota HOM05D007467 ORTHO05D009441 1.1e-55 221.5 351 46.2
CiPaw.11G111200 Carya illinoinensis HOM05D007467 ORTHO05D009441 1.8e-55 220.7 263 63.5
Nn1g00417 Nelumbo nucifera HOM05D007467 ORTHO05D009441 1.8e-55 220.7 351 47.0
TWI15G0957 Tripterygium wilfordii HOM05D007467 ORTHO05D009441 5.2e-55 219.2 355 45.1
CANSAT21G0614 Cannabis sativa HOM05D007467 ORTHO05D009441 2.0e-54 217.2 333 52.9
Lsat_1_v5_gn_6_10100 Lactuca sativa HOM05D007467 ORTHO05D009441 1.4e-52 211.1 325 46.2
Hma1.2p1_0456F.1_g156740 Hydrangea macrophylla HOM05D007467 ORTHO05D009441 2.3e-50 203.8 309 52.4
COL.COLO4_10812 Corchorus olitorius HOM05D007467 ORTHO05D009441 8.6e-50 201.8 263 49.8
ECA233G1457 Erigeron canadensis HOM05D007467 ORTHO05D009441 1.5e-49 201.1 356 50.6
vmacro11497 Vaccinium macrocarpon HOM05D007467 ORTHO05D009441 2.5e-49 200.3 287 55.1
Potri.003G147900 Populus trichocarpa HOM05D007467 ORTHO05D009441 2.1e-48 197.2 265 58.9
Gorai.006G205400 Gossypium raimondii HOM05D007467 ORTHO05D009441 3.6e-48 196.4 309 54.0
Gohir.A09G188250 Gossypium hirsutum HOM05D007467 ORTHO05D009441 6.2e-48 195.7 310 52.9
Gohir.D09G183100 Gossypium hirsutum HOM05D007467 ORTHO05D009441 1.1e-47 194.9 341 51.3
Eucgr.E01052 Eucalyptus grandis HOM05D007467 ORTHO05D009441 5.2e-47 192.6 393 47.3
Aqoxy7G00009 Aquilegia oxysepala HOM05D007467 ORTHO05D009441 1.5e-46 191.0 356 47.5
Nitab4.5_0008141g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 1.5e-46 191.0 262 58.8
PGR042G1595 Punica granatum HOM05D007467 ORTHO05D009441 1.5e-46 191.0 372 47.0
Rhsim02G0253000 Rhododendron simsii HOM05D007467 ORTHO05D009441 1.3e-45 188.0 269 54.6
GSVIVG01019666001 Vitis vinifera HOM05D007467 ORTHO05D009441 3.7e-45 186.4 263 55.5
Nitab4.5_0002720g0040 Nicotiana tabacum HOM05D007467 ORTHO05D009441 6.4e-45 185.7 262 56.9
Aa31LG2G1740 Aethionema arabicum HOM05D007467 ORTHO05D009441 2.5e-41 173.7 356 42.1
Sopen08g031410 Solanum pennellii HOM05D007467 ORTHO05D009441 3.3e-41 173.3 329 45.9
Sed0003485 Sechium edule HOM05D007467 ORTHO05D009441 5.6e-41 172.6 331 47.7
Solyc08g083220.1 Solanum lycopersicum HOM05D007467 ORTHO05D009441 1.6e-40 171.0 328 45.4
ClCG01G001480 Citrullus lanatus HOM05D007467 ORTHO05D009441 2.4e-39 167.2 265 52.8
CsaV3_5G001620 Cucumis sativus L. HOM05D007467 ORTHO05D009441 4.0e-39 166.4 339 48.4
Nn3g18852 Nelumbo nucifera HOM05D007467 ORTHO05D009441 2.0e-38 164.1 342 45.3
MELO3C005789.2 Cucumis melo HOM05D007467 ORTHO05D009441 1.1e-36 158.3 338 47.6
MBI12_g21574_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 7.1e-36 155.6 354 47.7
CARHR046220 Cardamine hirsuta HOM05D007467 ORTHO05D009441 9.3e-36 155.2 330 36.4
PSO478G5135 Papaver somniferum HOM05D007467 ORTHO05D009441 1.2e-35 154.8 363 43.0
MBI04_g15581_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 3.5e-35 153.3 280 38.9
MBI04_g43054_MAGBIO Magnolia biondii HOM05D007467 ORTHO05D009441 1.0e-34 151.8 256 40.2
PSO782G5165 Papaver somniferum HOM05D007467 ORTHO05D009441 2.3e-34 150.6 363 42.7
BcaC04g22507 Brassica carinata HOM05D007467 ORTHO05D009441 1.9e-33 147.5 345 40.0
SGA_v2.0_scaffold267G46175 Striga asiatica HOM05D007467 ORTHO05D009441 4.3e-33 146.4 353 40.5
Sp2g00870 Schrenkiella parvula HOM05D007467 ORTHO05D009441 6.4e-29 132.5 349 37.8
A09p15270 Brassica napus HOM05D007467 ORTHO05D009441 1.6e-27 127.9 330 37.9
BraA09t37173Z Brassica rapa HOM05D007467 ORTHO05D009441 1.6e-27 127.9 330 37.9
Carub.0002s0004 Capsella rubella HOM05D007467 ORTHO05D009441 2.1e-27 127.5 351 37.6
Thhalv10023631m.g Eutrema salsugineum HOM05D007467 ORTHO05D009441 2.1e-27 127.5 335 32.5
C09p18550 Brassica napus HOM05D007467 ORTHO05D009441 1.3e-26 124.8 345 37.1
BolC9t54751H Brassica oleracea HOM05D007467 ORTHO05D009441 1.3e-26 124.8 345 37.1
THA.LOC104823626 Tarenaya hassleriana HOM05D007467 ORTHO05D009441 6.2e-24 115.9 350 34.9
AL2G10070 Arabidopsis lyrata HOM05D007467 ORTHO05D009441 4.5e-22 109.8 350 37.4
Oeu022032.1 Olea europaea HOM05D007467 ORTHO05D009441 2.2e-21 107.5 185 41.6
BcaB07g31413 Brassica carinata HOM05D007467 ORTHO05D009441 4.9e-21 106.3 315 36.8
AT1G64690 Arabidopsis thaliana HOM05D007467 ORTHO05D009441 1.1e-20 105.1 346 36.1
CDE02G3312 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 1.9e-20 104.4 330 30.9
PGSC0003DMG400013732 Solanum tuberosum HOM05D007467 ORTHO05D009441 7.9e-19 99.0 169 41.4
Actinidia22211 Actinidia chinensis HOM05D007467 ORTHO05D009441 6.7e-18 95.9 70 70.0
AUR62007067 Chenopodium quinoa HOM05D007467 ORTHO05D009441 1.9e-17 94.4 286 32.2
Zm00001eb023700 Zea mays HOM05D007467 ORTHO05D009441 2.5e-17 94.0 330 34.5
AUR62019932 Chenopodium quinoa HOM05D007467 ORTHO05D009441 3.1e-15 87.0 267 31.8
EL10Ac5g12411 Beta vulgaris HOM05D007467 ORTHO05D009441 7.6e-14 82.4 218 33.5
Ah.12g053280 Amaranthus hybridus HOM05D007467 ORTHO05D009441 3.5e-11 73.6 384 27.3
ClCG00G001110 Citrullus lanatus HOM05D007467 ORTHO05D009441 1.9e-09 67.8 146 50.7
ATR0579G156 Amborella trichopoda HOM05D007467 ORTHO05D009441 2.1e-08 64.3 330 26.7
CDE11G0649 Ceratophyllum demersum HOM05D007467 ORTHO05D009441 5.3e-07 59.7 329 24.3
Os10g0562600 Oryza sativa ssp. japonica HOM05D007467 ORTHO05D009441 5.3e-07 59.7 184 31.5
Sed0003496 Sechium edule HOM05D002166 ORTHO05D002634 5.3e-07 59.7 210 29.5
Sed0003279 Sechium edule HOM05D002166 ORTHO05D002634 1.5e-06 58.2 183 32.2
BcaB07g31547 Brassica carinata HOM05D007467 ORTHO05D009441 2.6e-06 57.4 159 32.7


User provided reference genes

Program Settings