Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa011853 Carpinus fangiana HOM05D000838 ORTHO05D000656 2.3e-117 425.6 226 100.0
Cfa009909 Carpinus fangiana HOM05D000838 ORTHO05D000656 1.6e-73 280.0 243 68.7
Haze_24487 Corylus avellana HOM05D000838 ORTHO05D000656 2.5e-63 246.1 399 45.4
CiPaw.14G049000 Carya illinoinensis HOM05D000838 ORTHO05D000656 2.1e-49 199.9 353 40.8
QL01p023780 Quercus lobata HOM05D000838 ORTHO05D000656 3.1e-45 186.0 364 40.7
Cpa.g.sc2.268 Carica papaya HOM05D000838 ORTHO05D000656 3.8e-19 99.4 76 64.5
Actinidia23830 Actinidia chinensis HOM05D000838 ORTHO05D000656 4.2e-18 95.9 73 68.5
Lalb_Chr17g0345691 Lupinus albus HOM05D000838 ORTHO05D000656 7.2e-18 95.1 76 61.8
Rhsim01G0244500 Rhododendron simsii HOM05D000838 ORTHO05D000656 2.7e-17 93.2 73 63.0
arahy.Tifrunner.gnm1.ann1.DF1HSU Arachis hypogaea HOM05D000838 ORTHO05D000656 3.6e-17 92.8 76 61.8
arahy.Tifrunner.gnm1.ann1.ZQ919F Arachis hypogaea HOM05D000838 ORTHO05D000656 3.6e-17 92.8 76 61.8
Lj2A1104T78 Lonicera japonica HOM05D000838 ORTHO05D000656 1.0e-16 91.3 131 44.3
Medtr2g102450 Medicago truncatula HOM05D000838 ORTHO05D000656 1.4e-16 90.9 74 64.9
Prupe.6G038900 Prunus persica HOM05D000838 ORTHO05D000656 1.4e-16 90.9 75 62.7
Psat2g050840 Pisum sativum HOM05D000166 ORTHO05D001348 1.8e-16 90.5 74 63.5
HanXRQChr13g0391821 Helianthus annuus HOM05D000838 ORTHO05D000656 6.8e-16 88.6 74 60.8
CSS0005346 Camellia sinensis var. sinensis HOM05D000838 ORTHO05D000656 1.2e-15 87.8 75 62.7
CSS0007617 Camellia sinensis var. sinensis HOM05D000838 ORTHO05D000656 1.2e-15 87.8 75 62.7
Glyma.02G237500 Glycine max HOM05D000838 ORTHO05D000656 1.2e-15 87.8 77 61.0
Phvul.008G244300 Phaseolus vulgaris HOM05D000838 ORTHO05D000656 2.6e-15 86.7 75 62.7
Dinv28752 Davidia involucrata HOM05D000838 ORTHO05D000656 3.4e-15 86.3 74 59.5
Peaxi162Scf00131g10121 Petunia axillaris HOM05D000838 ORTHO05D000656 1.3e-14 84.3 78 59.0
TPR.G2166 Trifolium pratense HOM05D000838 ORTHO05D000656 1.3e-14 84.3 76 60.5
TPR.G37644 Trifolium pratense HOM05D000838 ORTHO05D000656 1.7e-14 84.0 76 57.9
CANSAT54G1365 Cannabis sativa HOM05D000838 ORTHO05D000656 2.8e-14 83.2 75 61.3
ECA247G0162 Erigeron canadensis HOM05D000838 ORTHO05D000656 2.8e-14 83.2 178 39.3
Migut.D00805 Erythranthe guttata HOM05D000838 ORTHO05D000656 6.3e-14 82.0 74 58.1
Lsat_1_v5_gn_9_13380 Lactuca sativa HOM05D000838 ORTHO05D000656 6.3e-14 82.0 74 54.1
DCAR_004791 Daucus carota HOM05D000838 ORTHO05D000656 1.1e-13 81.3 74 59.5
VMungo0647G1604 Vigna mungo HOM05D000838 ORTHO05D000656 1.1e-13 81.3 83 56.6
MD03G1047900 Malus domestica HOM05D000838 ORTHO05D000656 1.4e-13 80.9 80 52.5
Nitab4.5_0003194g0040 Nicotiana tabacum HOM05D000838 ORTHO05D000656 1.8e-13 80.5 78 56.4
Cc01_g15440 Coffea canephora HOM05D000838 ORTHO05D000656 2.4e-13 80.1 74 56.8
Nitab4.5_0002167g0020 Nicotiana tabacum HOM05D000838 ORTHO05D000656 3.1e-13 79.7 78 56.4
Solyc06g007530.2 Solanum lycopersicum HOM05D000838 ORTHO05D000656 3.1e-13 79.7 83 53.0
Sopen06g002440 Solanum pennellii HOM05D000838 ORTHO05D000656 4.1e-13 79.3 83 53.0
PGSC0003DMG400020648 Solanum tuberosum HOM05D000838 ORTHO05D000656 4.1e-13 79.3 83 53.0
RcHm_v2.0_Chr5g0073681 Rosa chinensis HOM05D000838 ORTHO05D000656 5.4e-13 79.0 134 38.8
Nn2g10224 Nelumbo nucifera HOM05D000838 ORTHO05D000656 1.6e-12 77.4 130 43.1
CAN.G181.26 Capsicum annuum HOM05D000838 ORTHO05D000656 2.0e-12 77.0 137 43.8
FAN21G3661 Fragaria x ananassa HOM05D000838 ORTHO05D000656 2.0e-12 77.0 72 58.3
FvH4_3g40930 Fragaria vesca HOM05D000838 ORTHO05D000656 3.5e-12 76.3 72 58.3
FAN11G3054 Fragaria x ananassa HOM05D000838 ORTHO05D000656 3.5e-12 76.3 72 58.3
FAN16G1700 Fragaria x ananassa HOM05D000838 ORTHO05D000656 3.5e-12 76.3 72 58.3
FAN25G2158 Fragaria x ananassa HOM05D000838 ORTHO05D000656 7.7e-12 75.1 72 56.9
TWI79G0758 Tripterygium wilfordii HOM05D000838 ORTHO05D000656 2.9e-11 73.2 170 37.6
COL.COLO4_11229 Corchorus olitorius HOM05D000838 ORTHO05D000656 2.5e-10 70.1 173 36.4
Oeu011396.1 Olea europaea HOM05D000838 ORTHO05D000656 5.5e-10 68.9 74 52.7
Ciclev10003383m.g Citrus clementina HOM05D000838 ORTHO05D000656 2.7e-09 66.6 78 51.3
PSO384G0907 Papaver somniferum HOM05D000838 ORTHO05D000656 8.0e-09 65.1 90 43.3
PSO724G0228 Papaver somniferum HOM05D000838 ORTHO05D000656 4.0e-08 62.8 89 39.3
PSO339G0421 Papaver somniferum HOM05D000838 ORTHO05D000656 5.2e-08 62.4 90 44.4
PSO135G0268 Papaver somniferum HOM05D000838 ORTHO05D000656 1.2e-07 61.2 92 40.2
ATR1127G154 Amborella trichopoda HOM05D000838 ORTHO05D000656 2.6e-07 60.1 128 38.3
Carub.0008s1882 Capsella rubella HOM05D000838 ORTHO05D000656 3.4e-07 59.7 72 51.4
AL8G34380 Arabidopsis lyrata HOM05D000838 ORTHO05D000656 5.7e-07 58.9 72 48.6
Aqoxy4G03287 Aquilegia oxysepala HOM05D000838 ORTHO05D000656 2.2e-06 57.0 76 46.1


User provided reference genes

Program Settings