Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa011737 Carpinus fangiana HOM05D012991 ORTHO05D012026 1.9e-63 245.7 133 100.0
QL01p039358 Quercus lobata HOM05D012991 ORTHO05D015212 4.5e-20 101.7 133 48.1
Haze_24345 Corylus avellana HOM05D012991 ORTHO05D015212 5.9e-20 101.3 65 83.1
Gohir.A05G107800 Gossypium hirsutum HOM05D012991 ORTHO05D015212 1.2e-12 77.0 95 44.2
Gorai.009G112100 Gossypium raimondii HOM05D012991 ORTHO05D015212 2.5e-10 69.3 92 42.4
Gohir.D05G108000 Gossypium hirsutum HOM05D012991 ORTHO05D015212 3.3e-10 68.9 92 42.4
Aa31LG11G330 Aethionema arabicum HOM05D012312 ORTHO05D012026 5.2e-08 61.6 77 45.5
Aa31LG11G340 Aethionema arabicum HOM05D012312 ORTHO05D012026 5.2e-08 61.6 77 45.5
Sabra16G0173400 Salix brachista HOM05D012312 ORTHO05D012026 6.8e-08 61.2 64 46.9
Carub.0008s1917 Capsella rubella HOM05D012312 ORTHO05D012026 8.9e-08 60.8 77 46.8
Ciclev10029610m.g Citrus clementina HOM05D012312 ORTHO05D012026 8.9e-08 60.8 86 41.9
Prupe.6G052800 Prunus persica HOM05D016645 ORTHO05D020718 1.2e-07 60.5 92 40.2
CiPaw.14G056600 Carya illinoinensis HOM05D012991 ORTHO05D015212 2.6e-07 59.3 90 42.2
Atru.chr1.2593 Acer truncatum HOM05D012991 ORTHO05D015212 3.4e-07 58.9 112 36.6
AT5G58570 Arabidopsis thaliana HOM05D012312 ORTHO05D012026 3.4e-07 58.9 77 41.6
Thhalv10015911m.g Eutrema salsugineum HOM05D012312 ORTHO05D012026 3.4e-07 58.9 72 44.4
Potri.001G279800 Populus trichocarpa HOM05D012312 ORTHO05D012026 3.4e-07 58.9 96 39.6
Sabra09G0056600 Salix brachista HOM05D012312 ORTHO05D012026 4.4e-07 58.5 71 40.8
BolC9t57912H Brassica oleracea HOM05D012312 ORTHO05D012026 7.5e-07 57.8 79 41.8
BraA10t43663Z Brassica rapa HOM05D012312 ORTHO05D012026 7.5e-07 57.8 79 41.8
Thecc.09G353300 Theobroma cacao HOM05D012991 ORTHO05D015212 7.5e-07 57.8 101 38.6
BcaB08g36192 Brassica carinata HOM05D012312 ORTHO05D012026 1.7e-06 56.6 74 41.9
Lj6g0009888 Lotus japonicus HOM05D021466 ORTHO05D012026 4.9e-06 55.1 95 35.8
Phvul.006G070900 Phaseolus vulgaris HOM05D021466 ORTHO05D012026 4.9e-06 55.1 89 36.0


User provided reference genes

Program Settings