Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa011538 Carpinus fangiana HOM05D007264 ORTHO05D008639 1.6e-86 322.8 169 100.0
Haze_24148 Corylus avellana HOM05D007264 ORTHO05D008639 2.0e-76 289.3 169 92.3
QL01p030632 Quercus lobata HOM05D007264 ORTHO05D008639 2.7e-54 215.7 168 73.8
CiPaw.14G066400 Carya illinoinensis HOM05D007264 ORTHO05D008639 6.3e-51 204.5 170 70.6
Prupe.6G071500 Prunus persica HOM05D007264 ORTHO05D008639 8.0e-38 161.0 165 57.6
Nn8g40679 Nelumbo nucifera HOM05D007264 ORTHO05D008639 1.5e-36 156.8 172 55.2
RcHm_v2.0_Chr5g0066101 Rosa chinensis HOM05D007264 ORTHO05D008639 2.0e-36 156.4 168 56.5
TAR560G0010 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.0e-36 156.4 178 54.5
TAR623G1366 Trochodendron aralioides HOM05D007264 ORTHO05D008639 3.4e-36 155.6 178 54.5
Dinv17036 Davidia involucrata HOM05D007264 ORTHO05D008639 4.9e-35 151.8 170 57.6
Dinv42982 Davidia involucrata HOM05D007264 ORTHO05D008639 4.9e-35 151.8 170 57.6
Dinv43117 Davidia involucrata HOM05D007264 ORTHO05D008639 4.9e-35 151.8 170 57.6
FAN25G3374 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.8e-34 149.8 168 53.6
MD03G1086900 Malus domestica HOM05D007264 ORTHO05D008639 3.1e-34 149.1 178 53.4
FAN21G2492 Fragaria x ananassa HOM05D007264 ORTHO05D008639 7.0e-34 147.9 168 52.4
TWI79G0692 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 7.0e-34 147.9 166 57.2
FvH4_3g36880 Fragaria vesca HOM05D007264 ORTHO05D008639 1.6e-33 146.7 168 51.8
FAN11G3606 Fragaria x ananassa HOM05D007264 ORTHO05D008639 1.6e-33 146.7 168 51.8
MD11G1096000 Malus domestica HOM05D007264 ORTHO05D008639 3.5e-33 145.6 172 54.1
GSVIVG01024917001 Vitis vinifera HOM05D007264 ORTHO05D008639 6.6e-32 141.4 167 51.5
Migut.D00885 Erythranthe guttata HOM05D007264 ORTHO05D008639 1.1e-31 140.6 167 51.5
Thecc.09G317100 Theobroma cacao HOM05D007264 ORTHO05D008639 5.6e-31 138.3 164 54.3
COL.COLO4_18565 Corchorus olitorius HOM05D007264 ORTHO05D008639 7.3e-31 137.9 173 52.6
Ciclev10029397m.g Citrus clementina HOM05D007264 ORTHO05D008639 9.5e-31 137.5 167 54.5
Potri.001G243500 Populus trichocarpa HOM05D007264 ORTHO05D008639 1.2e-30 137.1 171 49.7
Gorai.001G112100 Gossypium raimondii HOM05D007264 ORTHO05D008639 4.7e-30 135.2 145 56.6
MBI14_g08028_MAGBIO Magnolia biondii HOM05D007264 ORTHO05D008639 8.0e-30 134.4 138 58.7
arahy.Tifrunner.gnm1.ann1.4DS88F Arachis hypogaea HOM05D007264 ORTHO05D008639 1.0e-29 134.0 160 51.2
Gohir.D07G104200 Gossypium hirsutum HOM05D007264 ORTHO05D008639 1.4e-29 133.7 147 56.5
Actinidia33776 Actinidia chinensis HOM05D007264 ORTHO05D008639 1.8e-29 133.3 166 51.8
arahy.Tifrunner.gnm1.ann1.EHGE9H Arachis hypogaea HOM05D007264 ORTHO05D008639 1.8e-29 133.3 160 51.2
vmacro03038 Vaccinium macrocarpon HOM05D007264 ORTHO05D008639 1.8e-29 133.3 165 57.0
Eucgr.J02035 Eucalyptus grandis HOM05D007264 ORTHO05D008639 3.1e-29 132.5 168 49.4
Gohir.A07G099900 Gossypium hirsutum HOM05D007264 ORTHO05D008639 6.8e-29 131.3 170 51.8
Manes.01G170100 Manihot esculenta HOM05D007264 ORTHO05D008639 6.8e-29 131.3 161 50.3
Sabra16G0147800 Salix brachista HOM05D007264 ORTHO05D008639 8.9e-29 131.0 187 46.5
CSS0034107 Camellia sinensis var. sinensis HOM05D007264 ORTHO05D008639 1.5e-28 130.2 163 55.8
Cc01_g13240 Coffea canephora HOM05D007264 ORTHO05D008639 2.0e-28 129.8 171 49.7
PGR119G0519 Punica granatum HOM05D007264 ORTHO05D008639 3.4e-28 129.0 139 56.8
Peaxi162Scf00038g02028 Petunia axillaris HOM05D007264 ORTHO05D008639 1.7e-27 126.7 169 52.1
AL4G23740 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 2.4e-26 122.9 167 51.5
PSO339G5862 Papaver somniferum HOM05D007264 ORTHO05D008639 2.4e-26 122.9 168 47.6
Cpa.g.sc81.107 Carica papaya HOM05D007264 ORTHO05D008639 3.2e-26 122.5 173 49.7
Lsat_1_v5_gn_5_169441 Lactuca sativa HOM05D007264 ORTHO05D008639 3.2e-26 122.5 153 52.3
Sed0006840 Sechium edule HOM05D007264 ORTHO05D008639 3.2e-26 122.5 164 52.4
Atru.chr3.3962 Acer truncatum HOM05D007264 ORTHO05D008639 5.4e-26 121.7 182 47.3
AL41U10070 Arabidopsis lyrata HOM05D007264 ORTHO05D008639 5.4e-26 121.7 167 50.9
Nn2g13417 Nelumbo nucifera HOM05D007264 ORTHO05D008639 5.4e-26 121.7 107 62.6
Nitab4.5_0006942g0010 Nicotiana tabacum HOM05D007264 ORTHO05D008639 7.0e-26 121.3 190 45.8
Nitab4.5_0014843g0020 Nicotiana tabacum HOM05D007264 ORTHO05D008639 7.0e-26 121.3 191 47.6
ATR0559G356 Amborella trichopoda HOM05D007264 ORTHO05D008639 1.2e-25 120.6 155 50.3
Aqoxy1G00887 Aquilegia oxysepala HOM05D007264 ORTHO05D008639 1.6e-25 120.2 169 47.9
EL10Ac7g16055 Beta vulgaris HOM05D007264 ORTHO05D008639 1.7e-24 116.7 144 50.7
Oeu002436.1 Olea europaea HOM05D007264 ORTHO05D008639 3.0e-24 115.9 182 46.7
CsaV3_6G016660 Cucumis sativus L. HOM05D007264 ORTHO05D008639 3.9e-24 115.5 173 46.8
Oeu002437.1 Olea europaea HOM05D007264 ORTHO05D008639 8.6e-24 114.4 182 46.7
PSO513G0105 Papaver somniferum HOM05D007264 ORTHO05D008639 8.6e-24 114.4 167 47.3
AT2G29180 Arabidopsis thaliana HOM05D007264 ORTHO05D008639 1.1e-23 114.0 168 48.8
MSTRG.11098 Avicennia marina HOM05D007264 ORTHO05D008639 1.1e-23 114.0 170 49.4
Carub.0004s1020 Capsella rubella HOM05D007264 ORTHO05D008639 1.1e-23 114.0 169 49.1
Hund18892 Selenicereus undatus HOM05D007264 ORTHO05D008639 1.9e-23 113.2 167 49.7
Sopen05g005050 Solanum pennellii HOM05D007264 ORTHO05D008639 5.6e-23 111.7 169 49.7
Solyc05g009300.1 Solanum lycopersicum HOM05D007264 ORTHO05D008639 9.5e-23 110.9 165 47.3
DCAR_005951 Daucus carota HOM05D007264 ORTHO05D008639 1.2e-22 110.5 180 45.6
Duzib168G0085 Durio zibethinus HOM05D007264 ORTHO05D008639 1.2e-22 110.5 170 45.9
BcaC03g18293 Brassica carinata HOM05D007264 ORTHO05D008639 1.6e-22 110.2 164 50.0
C02p63690 Brassica napus HOM05D007264 ORTHO05D008639 1.6e-22 110.2 164 50.0
AUR62020022 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.6e-22 110.2 118 57.6
SGA_v2.0_scaffold111G31536 Striga asiatica HOM05D007264 ORTHO05D008639 1.6e-22 110.2 201 43.8
BolC2t12437H Brassica oleracea HOM05D007264 ORTHO05D008639 3.6e-22 109.0 140 55.0
HanXRQChr01g0010441 Helianthus annuus HOM05D007264 ORTHO05D008639 4.7e-22 108.6 164 46.3
Medtr2g097680 Medicago truncatula HOM05D007264 ORTHO05D008639 4.7e-22 108.6 168 46.4
CARHR122460 Cardamine hirsuta HOM05D007264 ORTHO05D008639 6.2e-22 108.2 167 47.3
MELO3C025896.2 Cucumis melo HOM05D007264 ORTHO05D008639 8.0e-22 107.8 176 46.0
Aa31LG5G7130 Aethionema arabicum HOM05D007264 ORTHO05D008639 1.8e-21 106.7 188 43.6
PGSC0003DMG400014567 Solanum tuberosum HOM05D007264 ORTHO05D008639 1.8e-21 106.7 174 47.7
BcaB01g03133 Brassica carinata HOM05D007264 ORTHO05D008639 2.3e-21 106.3 131 54.2
Medtr1g071380 Medicago truncatula HOM05D007264 ORTHO05D008639 3.1e-21 105.9 170 47.6
Lalb_Chr24g0394031 Lupinus albus HOM05D007264 ORTHO05D008639 5.2e-21 105.1 162 42.0
A02p43580 Brassica napus HOM05D007264 ORTHO05D008639 8.9e-21 104.4 166 47.6
CDE04G3075 Ceratophyllum demersum HOM05D007264 ORTHO05D008639 1.2e-20 104.0 120 51.7
ECA248G2900 Erigeron canadensis HOM05D007264 ORTHO05D008639 1.5e-20 103.6 94 64.9
CANSAT54G1805 Cannabis sativa HOM05D007264 ORTHO05D008639 3.4e-20 102.4 170 45.3
BraA02t09285Z Brassica rapa HOM05D007264 ORTHO05D008639 9.8e-20 100.9 166 46.4
ClCG02G019960 Citrullus lanatus HOM05D007264 ORTHO05D008639 3.7e-19 99.0 170 43.5
Lj3g0004900 Lotus japonicus HOM05D007264 ORTHO05D008639 3.7e-19 99.0 136 47.1
THA.LOC104800684 Tarenaya hassleriana HOM05D007264 ORTHO05D008639 1.9e-18 96.7 74 75.7
Sp4g11990 Schrenkiella parvula HOM05D007264 ORTHO05D008639 4.1e-18 95.5 177 45.8
Sc25g0001650 Simmondsia chinensis HOM05D007264 ORTHO05D008639 5.4e-18 95.1 116 50.0
TAR369G0859 Trochodendron aralioides HOM05D007264 ORTHO05D008639 2.1e-17 93.2 108 51.9
AUR62001749 Chenopodium quinoa HOM05D007264 ORTHO05D008639 1.7e-16 90.1 146 47.9
Glyma.15G035800 Glycine max HOM05D007264 ORTHO05D008639 1.7e-16 90.1 88 54.5
VMungo1080G0594 Vigna mungo HOM05D007264 ORTHO05D008639 3.0e-16 89.4 139 43.2
Glyma.13G338500 Glycine max HOM05D007264 ORTHO05D008639 3.9e-16 89.0 169 41.4
Ah.15g098550 Amaranthus hybridus HOM05D007264 ORTHO05D008639 6.6e-16 88.2 125 45.6
Phvul.L007743 Phaseolus vulgaris HOM05D007264 ORTHO05D008639 1.5e-15 87.0 164 42.1
Psat5g287960 Pisum sativum HOM05D007264 ORTHO05D008639 1.9e-15 86.7 168 40.5
Rhsim13G0078000 Rhododendron simsii HOM05D007264 ORTHO05D008639 2.1e-14 83.2 118 50.8
TPR.G6833 Trifolium pratense HOM05D007264 ORTHO05D008639 8.1e-14 81.3 143 40.6
unitig_899.g15261 Utricularia gibba HOM05D007264 ORTHO05D008639 1.3e-11 73.9 68 69.1
BcaB01g03134 Brassica carinata HOM05D007264 ORTHO05D008639 3.2e-10 69.3 173 38.7
TWI31G0635 Tripterygium wilfordii HOM05D007264 ORTHO05D008639 7.8e-09 64.7 133 39.8
Os03g0271500 Oryza sativa ssp. japonica HOM05D016300 ORTHO05D008639 2.3e-08 63.2 74 50.0
Thhalv10017315m.g Eutrema salsugineum HOM05D007264 ORTHO05D008639 1.5e-07 60.5 171 35.7
Potri.009G034951 Populus trichocarpa HOM05D007264 ORTHO05D008639 1.6e-06 57.0 64 54.7


User provided reference genes

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