Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa011499 Carpinus fangiana HOM05D002160 ORTHO05D002012 2.3e-24 115.2 77 100.0
Haze_24094 Corylus avellana HOM05D002160 ORTHO05D002012 1.1e-21 106.3 74 95.9
CiPaw.14G068500 Carya illinoinensis HOM05D002160 ORTHO05D002012 2.4e-13 78.6 78 55.1
CiPaw.09G192500 Carya illinoinensis HOM05D002160 ORTHO05D002012 9.4e-10 66.6 85 44.7
Cfa017382 Carpinus fangiana HOM05D002160 ORTHO05D002012 1.2e-09 66.2 85 50.6
Haze_20789 Corylus avellana HOM05D002160 ORTHO05D002012 1.2e-09 66.2 85 51.8
Haze_11621 Corylus avellana HOM05D002160 ORTHO05D002012 1.6e-09 65.9 77 62.3
GSVIVG01034174001 Vitis vinifera HOM05D002160 ORTHO05D002012 1.6e-09 65.9 86 47.7
CSS0038374 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 2.7e-09 65.1 85 44.7
CiPaw.03G262000 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.6e-09 64.7 77 46.8
TWI31G0095 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 3.6e-09 64.7 75 49.3
CSS0042900 Camellia sinensis var. sinensis HOM05D002160 ORTHO05D002012 4.6e-09 64.3 77 51.9
Duzib093G1046 Durio zibethinus HOM05D002160 ORTHO05D002012 4.6e-09 64.3 85 42.4
Gorai.002G257700 Gossypium raimondii HOM05D002160 ORTHO05D002012 4.6e-09 64.3 85 40.0
Potri.001G239650 Populus trichocarpa HOM05D002160 ORTHO05D002012 6.1e-09 63.9 77 51.9
Gohir.D01G211900 Gossypium hirsutum HOM05D002160 ORTHO05D002012 7.9e-09 63.5 81 49.4
MD03G1094500 Malus domestica HOM05D015563 ORTHO05D002012 1.0e-08 63.2 75 70.7
Cfa011500 Carpinus fangiana HOM05D002160 ORTHO05D002012 1.4e-08 62.8 56 57.1
COL.COLO4_14799 Corchorus olitorius HOM05D002160 ORTHO05D002012 1.4e-08 62.8 85 41.2
MD03G1093800 Malus domestica HOM05D015563 ORTHO05D002012 3.0e-08 61.6 75 72.0
MD11G1109300 Malus domestica HOM05D015563 ORTHO05D002012 3.0e-08 61.6 75 72.0
Prupe.6G077800 Prunus persica HOM05D002160 ORTHO05D002012 3.9e-08 61.2 77 59.7
Haze_24095 Corylus avellana HOM05D002160 ORTHO05D002012 5.1e-08 60.8 56 53.6
Duzib106G1044 Durio zibethinus HOM05D002160 ORTHO05D002012 5.1e-08 60.8 85 41.2
Duzib128G1340 Durio zibethinus HOM05D002160 ORTHO05D002012 5.1e-08 60.8 85 40.0
Duzib168G0776 Durio zibethinus HOM05D002160 ORTHO05D002012 5.1e-08 60.8 73 67.1
Potri.019G100001 Populus trichocarpa HOM05D002160 ORTHO05D002012 5.1e-08 60.8 74 66.2
Phvul.008G101800 Phaseolus vulgaris HOM05D002160 ORTHO05D002012 6.7e-08 60.5 86 41.9
TWI31G0178 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 6.7e-08 60.5 77 48.1
TAR369G0024 Trochodendron aralioides HOM05D002160 ORTHO05D002012 6.7e-08 60.5 86 45.3
Actinidia26465 Actinidia chinensis HOM05D002160 ORTHO05D002012 1.1e-07 59.7 77 49.4
Gohir.A01G222400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 1.1e-07 59.7 85 37.6
Prupe.6G077900 Prunus persica HOM05D002160 ORTHO05D002012 1.1e-07 59.7 56 53.6
VMungo1383G3367 Vigna mungo HOM05D002160 ORTHO05D002012 1.1e-07 59.7 86 41.9
CiPaw.10G145500 Carya illinoinensis HOM05D002160 ORTHO05D002012 1.5e-07 59.3 78 51.3
Manes.08G079000 Manihot esculenta HOM05D002160 ORTHO05D002012 1.5e-07 59.3 86 44.2
Thecc.05G039800 Theobroma cacao HOM05D002160 ORTHO05D002012 1.5e-07 59.3 86 40.7
TAR633G1907 Trochodendron aralioides HOM05D002160 ORTHO05D002012 1.5e-07 59.3 77 48.1
Actinidia05312 Actinidia chinensis HOM05D002160 ORTHO05D002012 2.0e-07 58.9 89 43.8
Manes.08G079262 Manihot esculenta HOM05D002160 ORTHO05D002012 2.0e-07 58.9 88 43.2
Potri.009G030800 Populus trichocarpa HOM05D002160 ORTHO05D002012 2.0e-07 58.9 87 41.4
Potri.013G131200 Populus trichocarpa HOM05D002160 ORTHO05D002012 2.0e-07 58.9 74 64.9
Rhsim05G0192600 Rhododendron simsii HOM05D002160 ORTHO05D002012 2.0e-07 58.9 85 42.4
CiPaw.13G094600 Carya illinoinensis HOM05D002160 ORTHO05D002012 3.3e-07 58.2 88 44.3
Lj3g0006632 Lotus japonicus HOM05D002160 ORTHO05D002012 3.3e-07 58.2 75 68.0
MD11G1109200 Malus domestica HOM05D015563 ORTHO05D002012 3.3e-07 58.2 75 68.0
Dinv37174 Davidia involucrata HOM05D002160 ORTHO05D002012 4.4e-07 57.8 86 43.0
Glyma.07G132000 Glycine max HOM05D002160 ORTHO05D002012 4.4e-07 57.8 86 41.9
Gohir.A04G082400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 4.4e-07 57.8 85 38.8
PGR004G1599 Punica granatum HOM05D002160 ORTHO05D002012 4.4e-07 57.8 86 40.7
QL07p048273 Quercus lobata HOM05D002160 ORTHO05D002012 4.4e-07 57.8 86 45.3
TWI31G0007 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 4.4e-07 57.8 77 45.5
Gohir.D04G121400 Gossypium hirsutum HOM05D002160 ORTHO05D002012 5.7e-07 57.4 85 38.8
TWI79G1473 Tripterygium wilfordii HOM05D002160 ORTHO05D002012 5.7e-07 57.4 75 49.3
Dinv35604 Davidia involucrata HOM05D002160 ORTHO05D002012 7.4e-07 57.0 52 57.7
QL01p032020 Quercus lobata HOM05D002160 ORTHO05D002012 7.4e-07 57.0 76 71.1
CANSAT35G0429 Cannabis sativa HOM05D002160 ORTHO05D002012 9.7e-07 56.6 86 43.0
Lj3g0021630 Lotus japonicus HOM05D002160 ORTHO05D002012 1.3e-06 56.2 79 48.1
GSVIVG01027808001 Vitis vinifera HOM05D002160 ORTHO05D002012 1.3e-06 56.2 88 42.0
Gorai.012G103800 Gossypium raimondii HOM05D002160 ORTHO05D002012 1.7e-06 55.8 85 37.6
Potri.001G040200 Populus trichocarpa HOM05D002160 ORTHO05D002012 1.7e-06 55.8 74 62.2
Potri.001G041268 Populus trichocarpa HOM05D002160 ORTHO05D002012 1.7e-06 55.8 74 62.2
Manes.08G079293 Manihot esculenta HOM05D002160 ORTHO05D002012 2.2e-06 55.5 86 41.9
Sabra06G0064700 Salix brachista HOM05D002160 ORTHO05D002012 2.2e-06 55.5 85 38.8
CiPaw.10G145400 Carya illinoinensis HOM05D002160 ORTHO05D002012 2.8e-06 55.1 86 40.7
Manes.08G079200 Manihot esculenta HOM05D002160 ORTHO05D002012 4.8e-06 54.3 87 40.2
Atru.chr3.3902 Acer truncatum HOM05D002160 ORTHO05D002012 8.2e-06 53.5 79 50.6
arahy.Tifrunner.gnm1.ann1.EU8JQM Arachis hypogaea HOM05D002160 ORTHO05D002012 8.2e-06 53.5 87 39.1
Lalb_Chr19g0125331 Lupinus albus HOM05D002160 ORTHO05D002012 8.2e-06 53.5 84 40.5
MD04G1128900 Malus domestica HOM05D002160 ORTHO05D002012 8.2e-06 53.5 79 45.6
Oeu007792.1 Olea europaea HOM05D002160 ORTHO05D002012 8.2e-06 53.5 80 46.2
Oeu036147.1 Olea europaea HOM05D002160 ORTHO05D002012 8.2e-06 53.5 78 47.4


User provided reference genes

Program Settings