Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa011231 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.1e-96 356.7 181 100.0
Haze_02597 Corylus avellana HOM05D008140 ORTHO05D009650 3.6e-84 315.1 181 90.6
QL04p041477 Quercus lobata HOM05D008140 ORTHO05D009650 5.7e-42 174.9 135 68.1
CiPaw.13G036700 Carya illinoinensis HOM05D008140 ORTHO05D009650 8.3e-33 144.4 205 49.8
Cfa011233 Carpinus fangiana HOM05D008140 ORTHO05D009650 1.2e-20 104.0 136 48.5
COL.COLO4_06812 Corchorus olitorius HOM05D008140 ORTHO05D009650 3.1e-19 99.4 139 43.2
Thecc.10G110900 Theobroma cacao HOM05D008140 ORTHO05D009650 1.3e-17 94.0 134 46.3
QL04p042101 Quercus lobata HOM05D008140 ORTHO05D009650 6.4e-17 91.7 133 46.6
Cfa011234 Carpinus fangiana HOM05D008140 ORTHO05D009650 8.3e-17 91.3 133 42.9
Duzib106G0172 Durio zibethinus HOM05D008140 ORTHO05D009650 1.1e-16 90.9 126 45.2
Potri.008G025200 Populus trichocarpa HOM05D008140 ORTHO05D009650 1.4e-16 90.5 133 46.6
Manes.07G090200 Manihot esculenta HOM05D008140 ORTHO05D009650 2.4e-16 89.7 110 52.7
Potri.008G025100 Populus trichocarpa HOM05D008140 ORTHO05D009650 5.4e-16 88.6 133 45.9
Prupe.2G086100 Prunus persica HOM05D008140 ORTHO05D009650 7.1e-16 88.2 132 43.9
MD07G1068400 Malus domestica HOM05D008140 ORTHO05D009650 9.2e-16 87.8 132 41.7
RcHm_v2.0_Chr1g0333151 Rosa chinensis HOM05D008140 ORTHO05D009650 9.2e-16 87.8 133 46.6
Haze_02596 Corylus avellana HOM05D008140 ORTHO05D009650 2.1e-15 86.7 127 42.5
Potri.010G235400 Populus trichocarpa HOM05D008140 ORTHO05D009650 4.6e-15 85.5 131 43.5
RcHm_v2.0_Chr1g0333141 Rosa chinensis HOM05D008140 ORTHO05D009650 6.0e-15 85.1 133 45.9
Lalb_Chr06g0170171 Lupinus albus HOM05D008140 ORTHO05D009650 7.8e-15 84.7 116 44.8
FAN10G4346 Fragaria x ananassa HOM05D008140 ORTHO05D009650 1.0e-14 84.3 131 42.7
FvH4_7g05940 Fragaria vesca HOM05D008140 ORTHO05D009650 1.3e-14 84.0 131 42.7
FAN06G2722 Fragaria x ananassa HOM05D008140 ORTHO05D009650 1.3e-14 84.0 131 42.7
FAN03G1479 Fragaria x ananassa HOM05D008140 ORTHO05D009650 1.7e-14 83.6 131 42.0
Ciclev10033301m.g Citrus clementina HOM05D008140 ORTHO05D009650 3.9e-14 82.4 117 43.6
Sabra10G0182500 Salix brachista HOM05D008140 ORTHO05D009650 6.6e-14 81.6 131 42.0
CiPaw.13G036800 Carya illinoinensis HOM05D008140 ORTHO05D009650 1.1e-13 80.9 125 44.0
FAN01G1993 Fragaria x ananassa HOM05D008140 ORTHO05D009650 1.5e-13 80.5 131 42.7
Haze_02595 Corylus avellana HOM05D008140 ORTHO05D009650 5.6e-13 78.6 124 41.1
PGSC0003DMG400027311 Solanum tuberosum HOM05D009634 ORTHO05D009650 2.1e-12 76.6 139 36.0
Sabra08G0016900 Salix brachista HOM05D008140 ORTHO05D009650 3.6e-12 75.9 124 44.4
TWI38G0562 Tripterygium wilfordii HOM05D008140 ORTHO05D009650 2.4e-11 73.2 109 45.0
Solyc11g007520.1 Solanum lycopersicum HOM05D009634 ORTHO05D009650 3.1e-11 72.8 131 38.9
Nitab4.5_0001850g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.2e-10 70.9 125 40.8
Sopen11g003360 Solanum pennellii HOM05D009634 ORTHO05D009650 1.2e-10 70.9 130 38.5
THA.LOC104803169 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 2.6e-10 69.7 133 36.1
Nitab4.5_0002878g0010 Nicotiana tabacum HOM05D009634 ORTHO05D009650 3.4e-10 69.3 140 36.4
Peaxi162Scf00244g00074 Petunia axillaris HOM05D009634 ORTHO05D009650 4.4e-10 68.9 98 44.9
QL04p041480 Quercus lobata HOM05D008140 ORTHO05D009650 7.6e-10 68.2 112 40.2
Peaxi162Scf00244g00075 Petunia axillaris HOM05D009634 ORTHO05D009650 9.9e-10 67.8 132 38.6
PGSC0003DMG400027312 Solanum tuberosum HOM05D009634 ORTHO05D009650 2.2e-09 66.6 131 33.6
TAR636G0417 Trochodendron aralioides HOM05D008140 ORTHO05D009650 8.4e-09 64.7 119 39.5
Nitab4.5_0002878g0050 Nicotiana tabacum HOM05D009634 ORTHO05D009650 1.1e-08 64.3 96 42.7
Cpa.g.sc19.24 Carica papaya HOM05D008140 ORTHO05D009650 2.4e-08 63.2 101 42.6
THA.LOC104803183 Tarenaya hassleriana HOM05D008140 ORTHO05D009650 3.2e-08 62.8 102 41.2
CANSAT56G1901 Cannabis sativa HOM05D008140 ORTHO05D009650 7.1e-08 61.6 111 41.4
CAN.G135.81 Capsicum annuum HOM05D009634 ORTHO05D009650 9.3e-08 61.2 100 41.0
Rhsim03G0105800 Rhododendron simsii HOM05D008140 ORTHO05D009650 9.3e-08 61.2 119 37.8
Oeu026565.1 Olea europaea HOM05D009634 ORTHO05D009650 1.6e-07 60.5 115 39.1
Ah.04g163690 Amaranthus hybridus HOM05D009634 ORTHO05D009650 2.1e-07 60.1 105 36.2
Nitab4.5_0012334g0020 Nicotiana tabacum HOM05D009634 ORTHO05D009650 2.1e-07 60.1 99 40.4
QL04p041665 Quercus lobata HOM05D008140 ORTHO05D009650 2.7e-07 59.7 104 40.4
SalBow6G4194 Salvia bowleyana HOM05D009634 ORTHO05D009650 2.7e-07 59.7 107 40.2
Cfa011235 Carpinus fangiana HOM05D008140 ORTHO05D009650 3.5e-07 59.3 105 38.1
CiPaw.14G029100 Carya illinoinensis HOM05D008140 ORTHO05D009650 3.5e-07 59.3 136 33.1
Oeu059859.1 Olea europaea HOM05D009634 ORTHO05D009650 4.6e-07 58.9 112 38.4
CiPaw.13G036900 Carya illinoinensis HOM05D008140 ORTHO05D009650 7.8e-07 58.2 123 34.1
SalBow6G5252 Salvia bowleyana HOM05D009634 ORTHO05D009650 1.0e-06 57.8 104 38.5
SalBow6G2478 Salvia bowleyana HOM05D009634 ORTHO05D009650 5.1e-06 55.5 183 31.1
SGA_v2.0_scaffold13G06494 Striga asiatica HOM05D009634 ORTHO05D009650 5.1e-06 55.5 114 39.5
Sp4g21180 Schrenkiella parvula HOM05D008140 ORTHO05D009650 6.6e-06 55.1 98 37.8


User provided reference genes

Program Settings