Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa011173 Carpinus fangiana HOM05D008230 ORTHO05D010279 2.0e-65 252.3 128 100.0
Haze_02676 Corylus avellana HOM05D008230 ORTHO05D010279 3.1e-50 201.8 129 83.7
CiPaw.14G026100 Carya illinoinensis HOM05D008230 ORTHO05D010279 2.5e-31 139.0 149 59.7
CiPaw.13G032900 Carya illinoinensis HOM05D008230 ORTHO05D010279 2.0e-28 129.4 150 58.7
QL04p038908 Quercus lobata HOM05D008230 ORTHO05D010279 3.3e-28 128.6 147 57.1
TPR.G4997 Trifolium pratense HOM05D008230 ORTHO05D010279 3.3e-20 102.1 139 51.8
Manes.05G048600 Manihot esculenta HOM05D008230 ORTHO05D010279 1.3e-19 100.1 141 46.1
Thecc.01G382000 Theobroma cacao HOM05D008230 ORTHO05D010279 1.3e-19 100.1 141 46.1
Cpa.g.sc49.161 Carica papaya HOM05D008230 ORTHO05D010279 6.3e-19 97.8 149 49.0
Gohir.D08G157300 Gossypium hirsutum HOM05D008230 ORTHO05D010279 3.1e-18 95.5 144 44.4
Gorai.004G163600 Gossypium raimondii HOM05D008230 ORTHO05D010279 7.0e-18 94.4 144 43.8
Lalb_Chr12g0208001 Lupinus albus HOM05D008230 ORTHO05D010279 3.5e-17 92.0 129 47.3
Medtr4g026350 Medicago truncatula HOM05D008230 ORTHO05D010279 3.5e-17 92.0 143 48.3
Potri.014G060400 Populus trichocarpa HOM05D008230 ORTHO05D010279 7.7e-17 90.9 148 41.2
arahy.Tifrunner.gnm1.ann1.MFP8ME Arachis hypogaea HOM05D008230 ORTHO05D010279 1.0e-16 90.5 143 44.1
Sabra02G0112300 Salix brachista HOM05D008230 ORTHO05D010279 1.0e-16 90.5 148 42.6
Prupe.2G138500 Prunus persica HOM05D008230 ORTHO05D010279 1.3e-16 90.1 157 42.0
Lalb_Chr03g0039781 Lupinus albus HOM05D008230 ORTHO05D010279 2.9e-16 89.0 128 43.8
Psat7g237760 Pisum sativum HOM05D008230 ORTHO05D010279 5.0e-16 88.2 144 47.2
Gohir.A08G136500 Gossypium hirsutum HOM05D008230 ORTHO05D010279 1.9e-15 86.3 144 40.3
Potri.002G144400 Populus trichocarpa HOM05D008230 ORTHO05D010279 4.2e-15 85.1 148 41.9
Gohir.A12G094500 Gossypium hirsutum HOM05D008230 ORTHO05D010279 9.4e-15 84.0 131 47.3
Gorai.008G105900 Gossypium raimondii HOM05D008230 ORTHO05D010279 9.4e-15 84.0 131 44.3
Lj3g0026436 Lotus japonicus HOM05D008230 ORTHO05D010279 1.2e-14 83.6 139 45.3
Gohir.D12G097250 Gossypium hirsutum HOM05D008230 ORTHO05D010279 1.6e-14 83.2 131 44.3
MD07G1116200 Malus domestica HOM05D008230 ORTHO05D010279 3.6e-14 82.0 158 40.5
CANSAT56G1720 Cannabis sativa HOM05D008230 ORTHO05D010279 3.0e-13 79.0 150 42.0
Sabra14G0044300 Salix brachista HOM05D008230 ORTHO05D010279 3.0e-13 79.0 149 39.6
CANSAT56G2525 Cannabis sativa HOM05D008230 ORTHO05D010279 2.0e-12 76.3 150 38.7
Hma1.2p1_0041F.1_g025330 Hydrangea macrophylla HOM05D008230 ORTHO05D010279 2.0e-12 76.3 146 42.5
Phvul.010G077800 Phaseolus vulgaris HOM05D008230 ORTHO05D010279 2.0e-12 76.3 131 42.7
Glyma.03G031600 Glycine max HOM05D008230 ORTHO05D010279 5.7e-12 74.7 142 40.8
VMungo0331G0239 Vigna mungo HOM05D008230 ORTHO05D010279 9.8e-12 73.9 130 40.8
Glyma.01G136600 Glycine max HOM05D008230 ORTHO05D010279 1.7e-11 73.2 139 39.6
PGR004G0323 Punica granatum HOM05D008230 ORTHO05D010279 2.8e-11 72.4 155 39.4
FAN01G0499 Fragaria x ananassa HOM05D008230 ORTHO05D010279 4.8e-11 71.6 162 38.9
Eucgr.D02490 Eucalyptus grandis HOM05D008230 ORTHO05D010279 1.1e-10 70.5 120 39.2
COL.COLO4_12495 Corchorus olitorius HOM05D008230 ORTHO05D010279 1.4e-10 70.1 93 46.2
FvH4_7g11140 Fragaria vesca HOM05D008230 ORTHO05D010279 2.4e-10 69.3 161 38.5
Lalb_Chr07g0190181 Lupinus albus HOM05D008230 ORTHO05D010279 2.4e-10 69.3 71 59.2
FAN06G0210 Fragaria x ananassa HOM05D008230 ORTHO05D010279 5.4e-10 68.2 161 37.9
Nn1g01052 Nelumbo nucifera HOM05D008230 ORTHO05D010279 1.2e-09 67.0 139 40.3
Nn6g34001 Nelumbo nucifera HOM05D008230 ORTHO05D010279 2.0e-09 66.2 159 36.5
Dinv43677 Davidia involucrata HOM05D008230 ORTHO05D010279 2.7e-09 65.9 143 39.2
FAN06G3296 Fragaria x ananassa HOM05D008230 ORTHO05D010279 3.5e-09 65.5 161 37.3
FAN10G0483 Fragaria x ananassa HOM05D008230 ORTHO05D010279 3.5e-09 65.5 161 37.3
FAN10G2770 Fragaria x ananassa HOM05D008230 ORTHO05D010279 3.5e-09 65.5 161 37.3
FAN03G0682 Fragaria x ananassa HOM05D008230 ORTHO05D010279 2.2e-08 62.8 162 34.6
FAN03G1067 Fragaria x ananassa HOM05D008230 ORTHO05D010279 3.8e-08 62.0 162 34.6
Actinidia12189 Actinidia chinensis HOM05D008230 ORTHO05D010279 6.5e-08 61.2 142 38.7
Thecc.03G156300 Theobroma cacao HOM05D015292 ORTHO05D017778 1.9e-07 59.7 145 40.0
Migut.B01599 Erythranthe guttata HOM05D008230 ORTHO05D010279 4.2e-07 58.5 89 42.7
Dinv44123 Davidia involucrata HOM05D008230 ORTHO05D010279 9.4e-07 57.4 136 33.1
Rhsim01G0150200 Rhododendron simsii HOM05D008230 ORTHO05D010279 9.4e-07 57.4 141 37.6
Hma1.2p1_0432F.1_g151700 Hydrangea macrophylla HOM05D016610 ORTHO05D017811 1.2e-06 57.0 68 48.5
TPR.G39102 Trifolium pratense HOM05D028576 ORTHO05D029774 2.7e-06 55.8 74 51.4
Dinv44126 Davidia involucrata HOM05D008230 ORTHO05D010279 4.7e-06 55.1 132 34.1
SGA_v2.0_scaffold153G36972 Striga asiatica HOM05D008230 ORTHO05D010279 4.7e-06 55.1 106 34.0
Haze_02675 Corylus avellana HOM05D008230 ORTHO05D010279 6.1e-06 54.7 125 40.0
SalBow5G3157 Salvia bowleyana HOM05D008230 ORTHO05D010279 6.1e-06 54.7 124 37.1


User provided reference genes

Program Settings