Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa011161 Carpinus fangiana HOM05D006398 ORTHO05D007983 4.1e-105 384.8 204 100.0
Cfa007121 Carpinus fangiana HOM05D006398 ORTHO05D007983 5.8e-51 204.9 143 84.6
CiPaw.03G212200 Carya illinoinensis HOM05D006398 ORTHO05D007983 1.6e-48 196.8 143 81.8
Cfa000559 Carpinus fangiana HOM05D006398 ORTHO05D007983 2.4e-44 183.0 185 62.7
QL06p053503 Quercus lobata HOM05D006398 ORTHO05D007983 1.0e-42 177.6 143 74.8
Dinv19113 Davidia involucrata HOM05D006398 ORTHO05D007983 1.1e-41 174.1 144 66.0
Prupe.7G188600 Prunus persica HOM05D006398 ORTHO05D007983 6.1e-40 168.3 144 68.1
Thecc.04G122700 Theobroma cacao HOM05D006398 ORTHO05D007983 1.0e-39 167.5 143 63.6
Dinv28289 Davidia involucrata HOM05D006398 ORTHO05D007983 2.3e-39 166.4 145 64.1
Duzib133G0235 Durio zibethinus HOM05D006398 ORTHO05D007983 5.1e-39 165.2 143 69.9
Dinv24399 Davidia involucrata HOM05D006398 ORTHO05D007983 8.7e-39 164.5 144 63.9
COL.COLO4_15698 Corchorus olitorius HOM05D006398 ORTHO05D007983 2.5e-38 162.9 143 69.9
Gohir.A07G076575 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.8e-36 156.8 143 67.8
Gorai.001G086400 Gossypium raimondii HOM05D006398 ORTHO05D007983 5.3e-36 155.2 143 66.4
Manes.02G117704 Manihot esculenta HOM05D006398 ORTHO05D007983 5.3e-36 155.2 146 64.4
FAN23G0152 Fragaria x ananassa HOM05D006398 ORTHO05D007983 2.0e-35 153.3 144 61.8
TAR381G1497 Trochodendron aralioides HOM05D006398 ORTHO05D007983 2.6e-35 152.9 144 63.9
Lj2g0016631 Lotus japonicus HOM05D006398 ORTHO05D007983 3.4e-35 152.5 143 66.4
Gohir.D07G081300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 4.5e-35 152.1 143 65.0
Atru.chr3.7 Acer truncatum HOM05D006398 ORTHO05D007983 5.9e-35 151.8 144 63.9
FAN26G0304 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.0e-34 151.0 144 61.1
Hma1.2p1_0085F.1_g044270 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 1.0e-34 151.0 143 59.4
Ca_25041_v3 Cicer arietinum L. HOM05D006398 ORTHO05D007983 1.3e-34 150.6 143 62.2
Lalb_Chr16g0380261 Lupinus albus HOM05D006398 ORTHO05D007983 1.3e-34 150.6 144 63.9
Actinidia28761 Actinidia chinensis HOM05D006398 ORTHO05D007983 1.7e-34 150.2 156 60.3
Medtr5g025015 Medicago truncatula HOM05D006398 ORTHO05D007983 3.8e-34 149.1 146 59.6
FvH4_1g09810 Fragaria vesca HOM05D006398 ORTHO05D007983 6.5e-34 148.3 144 59.7
FAN19G1193 Fragaria x ananassa HOM05D006398 ORTHO05D007983 6.5e-34 148.3 144 59.7
Manes.01G158600 Manihot esculenta HOM05D006398 ORTHO05D007983 1.1e-33 147.5 143 61.5
Ciclev10026700m.g Citrus clementina HOM05D006398 ORTHO05D007983 5.5e-33 145.2 143 63.6
CSS0046434 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 2.7e-32 142.9 143 60.8
TPR.G33762 Trifolium pratense HOM05D006398 ORTHO05D007983 2.7e-32 142.9 146 58.9
Cfa012756 Carpinus fangiana HOM05D006398 ORTHO05D007983 7.9e-32 141.4 104 85.6
FAN28G0584 Fragaria x ananassa HOM05D006398 ORTHO05D007983 1.0e-31 141.0 144 61.8
MD15G1226600 Malus domestica HOM05D006398 ORTHO05D007983 1.0e-31 141.0 131 66.4
CSS0002146 Camellia sinensis var. sinensis HOM05D006398 ORTHO05D007983 1.4e-31 140.6 143 60.1
Psat2g147080 Pisum sativum HOM05D006398 ORTHO05D007983 3.9e-31 139.0 144 56.2
RcHm_v2.0_Chr2g0096641 Rosa chinensis HOM05D006398 ORTHO05D007983 3.9e-31 139.0 144 63.9
Gohir.A11G167300 Gossypium hirsutum HOM05D006398 ORTHO05D007983 5.1e-31 138.7 144 62.5
Gorai.007G185900 Gossypium raimondii HOM05D006398 ORTHO05D007983 1.5e-30 137.1 144 61.8
PGR119G1180 Punica granatum HOM05D006398 ORTHO05D007983 2.0e-30 136.7 148 66.2
Potri.011G146400 Populus trichocarpa HOM05D006398 ORTHO05D007983 3.3e-30 136.0 145 54.5
Glyma.11G089000 Glycine max HOM05D006398 ORTHO05D007983 2.8e-29 132.9 144 61.8
vmacro20410 Vaccinium macrocarpon HOM05D006398 ORTHO05D007983 2.8e-29 132.9 143 56.6
Nn6g31587 Nelumbo nucifera HOM05D006398 ORTHO05D007983 3.7e-29 132.5 144 55.6
Gohir.D11G173600 Gossypium hirsutum HOM05D006398 ORTHO05D007983 1.1e-28 131.0 138 60.9
TAR376G1029 Trochodendron aralioides HOM05D006398 ORTHO05D007983 1.1e-28 131.0 144 56.2
Lj4P245T44 Lonicera japonica HOM05D006398 ORTHO05D007983 1.4e-28 130.6 145 57.9
Haze_03650 Corylus avellana HOM05D000071 ORTHO05D007983 6.9e-28 128.3 102 81.4
DCAR_014127 Daucus carota HOM05D006398 ORTHO05D007983 1.5e-27 127.1 142 57.7
Eucgr.J02575 Eucalyptus grandis HOM05D006398 ORTHO05D007983 1.5e-27 127.1 146 58.9
Sabra11G0131300 Salix brachista HOM05D006398 ORTHO05D007983 1.5e-27 127.1 145 52.4
PSO017G7180 Papaver somniferum HOM05D006398 ORTHO05D007983 1.0e-26 124.4 143 55.2
PSO017G0885 Papaver somniferum HOM05D006398 ORTHO05D007983 1.3e-26 124.0 146 53.4
PGR042G1229 Punica granatum HOM05D006398 ORTHO05D007983 1.7e-26 123.6 148 60.8
MBI04_g11522_MAGBIO Magnolia biondii HOM05D006398 ORTHO05D007983 1.4e-25 120.6 143 54.5
Rhsim10G0190200 Rhododendron simsii HOM05D006398 ORTHO05D007983 1.4e-25 120.6 148 50.0
TWI53G1768 Tripterygium wilfordii HOM05D006398 ORTHO05D007983 1.9e-25 120.2 140 57.1
Sabra16G0308300 Salix brachista HOM05D006398 ORTHO05D007983 2.5e-25 119.8 144 52.1
Nitab4.5_0012518g0010 Nicotiana tabacum HOM05D006398 ORTHO05D007983 4.2e-25 119.0 142 52.1
Sed0010545 Sechium edule HOM05D006398 ORTHO05D007983 1.6e-24 117.1 126 56.3
CsaV3_6G047960 Cucumis sativus L. HOM05D006398 ORTHO05D007983 2.1e-24 116.7 101 63.4
MSTRG.19082 Avicennia marina HOM05D006398 ORTHO05D007983 3.6e-24 115.9 143 53.8
Oeu024785.2 Olea europaea HOM05D006398 ORTHO05D007983 4.7e-24 115.5 143 51.0
Aqoxy5G00947 Aquilegia oxysepala HOM05D006398 ORTHO05D007983 6.1e-24 115.2 146 54.8
MELO3C007985.2 Cucumis melo HOM05D006398 ORTHO05D007983 1.0e-23 114.4 102 63.7
Nitab4.5_0011544g0020 Nicotiana tabacum HOM05D006398 ORTHO05D007983 1.0e-23 114.4 128 51.6
Oeu000786.1 Olea europaea HOM05D006398 ORTHO05D007983 1.0e-23 114.4 143 53.1
Glyma.01G155800 Glycine max HOM05D006398 ORTHO05D007983 1.8e-23 113.6 147 55.1
Peaxi162Scf00981g00021 Petunia axillaris HOM05D006398 ORTHO05D007983 2.3e-23 113.2 143 54.5
Sopen02g017390 Solanum pennellii HOM05D006398 ORTHO05D007983 2.3e-23 113.2 143 49.0
VMungo1215G0575 Vigna mungo HOM05D006398 ORTHO05D007983 2.3e-23 113.2 141 58.9
Phvul.002G119800 Phaseolus vulgaris HOM05D006398 ORTHO05D007983 3.0e-23 112.8 143 57.3
Solyc02g068290.2 Solanum lycopersicum HOM05D006398 ORTHO05D007983 3.0e-23 112.8 143 49.0
ATR0605G223 Amborella trichopoda HOM05D006398 ORTHO05D007983 6.7e-23 111.7 145 57.9
PGSC0003DMG400009426 Solanum tuberosum HOM05D006398 ORTHO05D007983 1.5e-22 110.5 144 49.3
CANSAT56G1034 Cannabis sativa HOM05D006398 ORTHO05D007983 2.0e-22 110.2 138 55.8
Sed0016714 Sechium edule HOM05D006398 ORTHO05D007983 7.4e-22 108.2 124 62.1
SalBow3G3387 Salvia bowleyana HOM05D006398 ORTHO05D007983 9.7e-22 107.8 145 49.0
CAN.G883.23 Capsicum annuum HOM05D006398 ORTHO05D007983 1.7e-21 107.1 156 50.6
MD02G1107400 Malus domestica HOM05D006398 ORTHO05D007983 1.4e-20 104.0 85 69.4
HanXRQChr10g0316121 Helianthus annuus HOM05D006398 ORTHO05D007983 2.4e-20 103.2 144 50.0
ECA238G1438 Erigeron canadensis HOM05D006398 ORTHO05D007983 3.1e-20 102.8 143 51.0
Hma1.2p1_0353F.1_g133130 Hydrangea macrophylla HOM05D006398 ORTHO05D007983 9.1e-20 101.3 143 46.9
TAR628G0945 Trochodendron aralioides HOM05D006398 ORTHO05D007983 9.1e-20 101.3 107 58.9
EL10Ac5g11754 Beta vulgaris HOM05D006398 ORTHO05D007983 1.6e-16 90.5 144 44.4
Migut.J00328 Erythranthe guttata HOM05D006398 ORTHO05D007983 3.0e-15 86.3 92 54.3
Lalb_Chr05g0215011 Lupinus albus HOM05D006398 ORTHO05D007983 3.0e-15 86.3 144 47.2
Lsat_1_v5_gn_2_72860 Lactuca sativa HOM05D006398 ORTHO05D007983 2.0e-14 83.6 67 62.7
HPP92_018846 Vanilla planifolia HOM05D006398 ORTHO05D007983 3.3e-14 82.8 143 42.0
SGA_v2.0_scaffold126G33784 Striga asiatica HOM05D006398 ORTHO05D007983 2.2e-13 80.1 95 49.5
Ah.02g115220 Amaranthus hybridus HOM05D006398 ORTHO05D007983 3.7e-13 79.3 98 49.0
CDE06G2001 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 1.4e-12 77.4 137 44.5
CDE04G3216 Ceratophyllum demersum HOM05D006398 ORTHO05D007983 2.4e-12 76.6 151 43.7
Sc03g0004180 Simmondsia chinensis HOM05D006398 ORTHO05D007983 3.1e-12 76.3 143 45.5
Zm00001eb236520 Zea mays HOM05D006398 ORTHO05D007983 4.1e-12 75.9 143 49.0
SHI11157 Sapria himalayana HOM05D006398 ORTHO05D007983 1.2e-11 74.3 121 46.3
Os02g0193500 Oryza sativa ssp. japonica HOM05D006398 ORTHO05D007983 7.7e-11 71.6 143 37.1
HPP92_018898 Vanilla planifolia HOM05D006398 ORTHO05D007983 7.7e-11 71.6 91 49.5
arahy.Tifrunner.gnm1.ann1.GQ5KDA Arachis hypogaea HOM05D006398 ORTHO05D007983 3.8e-10 69.3 51 70.6
Cpa.g.sc178.36 Carica papaya HOM05D006398 ORTHO05D007983 3.8e-10 69.3 104 44.2
Thhalv10010838m.g Eutrema salsugineum HOM05D006398 ORTHO05D007983 8.5e-10 68.2 140 44.3
AT3G51500 Arabidopsis thaliana HOM05D006398 ORTHO05D007983 7.2e-09 65.1 92 56.5
Carub.0005s1788 Capsella rubella HOM05D006398 ORTHO05D007983 7.2e-09 65.1 141 46.1
SEGI_02084 Sequoiadendron giganteum HOM05D006398 ORTHO05D007983 1.2e-08 64.3 128 41.4
THA.LOC109117268 Tarenaya hassleriana HOM05D006398 ORTHO05D007983 1.6e-08 63.9 144 44.4
Sp5g10740 Schrenkiella parvula HOM05D006398 ORTHO05D007983 2.7e-08 63.2 91 51.6
Aa31LG4G7260 Aethionema arabicum HOM05D000087 ORTHO05D002585 4.0e-07 59.3 62 64.5
A03p48310 Brassica napus HOM05D006398 ORTHO05D007983 5.2e-07 58.9 93 44.1
unitig_8.g4055 Utricularia gibba HOM05D006398 ORTHO05D007983 6.8e-07 58.5 137 40.9
A01p23410 Brassica napus HOM05D006398 ORTHO05D007983 5.7e-06 55.5 97 51.5
BraA01t02248Z Brassica rapa HOM05D006398 ORTHO05D007983 5.7e-06 55.5 97 51.5
AUR62036260 Chenopodium quinoa HOM05D006398 ORTHO05D007983 5.7e-06 55.5 149 38.3
C01p29040 Brassica napus HOM05D006398 ORTHO05D007983 9.8e-06 54.7 97 51.5
BolC1t02836H Brassica oleracea HOM05D006398 ORTHO05D007983 9.8e-06 54.7 97 51.5
AUR62039711 Chenopodium quinoa HOM05D006398 ORTHO05D007983 9.8e-06 54.7 143 38.5


User provided reference genes

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