Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa011150 Carpinus fangiana HOM05D006102 ORTHO05D007550 0.0e+00 1242.3 656 100.0
Cfa011148 Carpinus fangiana HOM05D006102 ORTHO05D007550 1.4e-234 816.6 671 70.6
Cfa011153 Carpinus fangiana HOM05D006102 ORTHO05D007550 1.0e-218 763.8 615 71.5
Cfa011155 Carpinus fangiana HOM05D006102 ORTHO05D007550 5.8e-201 704.9 711 62.0
QL04p037175 Quercus lobata HOM05D006102 ORTHO05D007550 1.1e-178 630.9 755 52.7
CiPaw.14G025500 Carya illinoinensis HOM05D006102 ORTHO05D007550 9.3e-159 564.7 610 54.8
Prupe.2G137200 Prunus persica HOM05D006102 ORTHO05D007550 2.2e-139 500.4 712 45.5
Haze_02710 Corylus avellana HOM05D006102 ORTHO05D007550 7.4e-132 475.3 370 73.8
Duzib138G0330 Durio zibethinus HOM05D006102 ORTHO05D007550 1.2e-126 458.0 748 43.3
Dinv43669 Davidia involucrata HOM05D006102 ORTHO05D007550 2.7e-126 456.8 729 42.0
CANSAT56G2478 Cannabis sativa HOM05D006102 ORTHO05D007550 1.5e-124 451.1 589 48.2
Thecc.01G384200 Theobroma cacao HOM05D006102 ORTHO05D007550 2.6e-124 450.3 719 43.3
MD07G1115100 Malus domestica HOM05D006102 ORTHO05D007550 1.3e-123 448.0 732 43.7
Potri.014G066000 Populus trichocarpa HOM05D006102 ORTHO05D007550 2.2e-123 447.2 561 49.0
Lj3g0012088 Lotus japonicus HOM05D006102 ORTHO05D007550 1.4e-122 444.5 602 47.8
Sabra14G0046000 Salix brachista HOM05D006102 ORTHO05D007550 9.1e-122 441.8 582 47.6
RcHm_v2.0_Chr1g0349071 Rosa chinensis HOM05D006102 ORTHO05D007550 4.5e-121 439.5 742 42.5
Gohir.D11G083100 Gossypium hirsutum HOM05D006102 ORTHO05D007550 1.7e-120 437.6 745 42.8
Gorai.007G088700 Gossypium raimondii HOM05D006102 ORTHO05D007550 1.9e-119 434.1 745 42.7
CSS0002341 Camellia sinensis var. sinensis HOM05D006102 ORTHO05D007550 5.5e-119 432.6 726 42.7
FAN03G1880 Fragaria x ananassa HOM05D006102 ORTHO05D007550 7.2e-119 432.2 569 49.7
FAN06G2296 Fragaria x ananassa HOM05D006102 ORTHO05D007550 4.7e-118 429.5 569 49.7
Lalb_Chr07g0190291 Lupinus albus HOM05D006102 ORTHO05D007550 8.0e-118 428.7 720 42.1
TAR375G0254 Trochodendron aralioides HOM05D006102 ORTHO05D007550 6.8e-117 425.6 722 40.9
FAN06G2175 Fragaria x ananassa HOM05D006102 ORTHO05D007550 1.2e-116 424.9 569 49.4
FAN10G3138 Fragaria x ananassa HOM05D006102 ORTHO05D007550 1.7e-115 421.0 691 42.3
Gohir.A11G078500 Gossypium hirsutum HOM05D006102 ORTHO05D007550 4.1e-114 416.4 726 42.3
FAN10G3898 Fragaria x ananassa HOM05D006102 ORTHO05D007550 3.5e-113 413.3 702 41.5
Ciclev10018476m.g Citrus clementina HOM05D006102 ORTHO05D007550 4.5e-113 412.9 753 40.5
Glyma.03G032900 Glycine max HOM05D006102 ORTHO05D007550 6.1e-110 402.5 591 45.5
TWI59G0915 Tripterygium wilfordii HOM05D006102 ORTHO05D007550 8.0e-110 402.1 746 38.6
TPR.G4985 Trifolium pratense HOM05D006102 ORTHO05D007550 5.4e-106 389.4 726 39.3
Nn1g00999 Nelumbo nucifera HOM05D006102 ORTHO05D007550 2.7e-105 387.1 708 37.7
arahy.Tifrunner.gnm1.ann1.W52PF9 Arachis hypogaea HOM05D006102 ORTHO05D007550 7.8e-105 385.6 583 44.1
Phvul.010G071832 Phaseolus vulgaris HOM05D006102 ORTHO05D007550 1.0e-104 385.2 546 46.0
CsaV3_3G007350 Cucumis sativus L. HOM05D006102 ORTHO05D007550 2.3e-104 384.0 718 37.6
arahy.Tifrunner.gnm1.ann1.1V3LDQ Arachis hypogaea HOM05D006102 ORTHO05D007550 3.9e-104 383.3 583 43.9
vmacro13446 Vaccinium macrocarpon HOM05D006102 ORTHO05D007550 2.5e-103 380.6 724 39.5
COL.COLO4_12485 Corchorus olitorius HOM05D006102 ORTHO05D007550 2.0e-100 370.9 723 39.3
THA.LOC104801481 Tarenaya hassleriana HOM05D006102 ORTHO05D007550 2.9e-99 367.1 446 47.3
Haze_02708 Corylus avellana HOM05D006102 ORTHO05D007550 4.9e-99 366.3 389 58.1
Ca_19854_v3 Cicer arietinum L. HOM05D006102 ORTHO05D007550 7.0e-98 362.5 626 39.9
AT4G00060 Arabidopsis thaliana HOM05D006102 ORTHO05D007550 1.6e-97 361.3 569 40.4
GSVIVG01018154001 Vitis vinifera HOM05D006102 ORTHO05D007550 4.6e-97 359.8 562 43.1
PGR004G2833 Punica granatum HOM05D006102 ORTHO05D007550 5.0e-96 356.3 604 42.5
Lj7A537G47 Lonicera japonica HOM05D006102 ORTHO05D007550 3.3e-95 353.6 452 47.3
AL6G53450 Arabidopsis lyrata HOM05D006102 ORTHO05D007550 4.3e-95 353.2 567 39.9
CARHR248110 Cardamine hirsuta HOM05D006102 ORTHO05D007550 8.0e-94 349.0 594 39.6
Medtr4g027425 Medicago truncatula HOM05D006102 ORTHO05D007550 1.1e-93 348.6 781 36.0
Rhsim07G0031600 Rhododendron simsii HOM05D006102 ORTHO05D007550 2.2e-91 340.9 633 39.8
Carub.0006s3716 Capsella rubella HOM05D006102 ORTHO05D007550 5.4e-90 336.3 597 38.5
Eucgr.D02494 Eucalyptus grandis HOM05D006102 ORTHO05D007550 2.3e-88 330.9 338 54.7
A03p27130 Brassica napus HOM05D006102 ORTHO05D007550 1.5e-87 328.2 432 47.2
BcaB01g02181 Brassica carinata HOM05D006102 ORTHO05D007550 5.6e-87 326.2 438 45.9
Sp6g00130 Schrenkiella parvula HOM05D006102 ORTHO05D007550 7.3e-87 325.9 520 40.6
BraA03t11926Z Brassica rapa HOM05D006102 ORTHO05D007550 9.5e-87 325.5 422 47.2
BcaC01g04890 Brassica carinata HOM05D006102 ORTHO05D007550 2.1e-86 324.3 426 46.2
C03p32590 Brassica napus HOM05D006102 ORTHO05D007550 2.1e-86 324.3 426 46.2
BolC3t15598H Brassica oleracea HOM05D006102 ORTHO05D007550 2.1e-86 324.3 426 46.2
Solyc01g090860.3 Solanum lycopersicum HOM05D006102 ORTHO05D007550 6.2e-86 322.8 552 41.1
Peaxi162Scf00803g00223 Petunia axillaris HOM05D006102 ORTHO05D007550 8.1e-86 322.4 429 46.9
Thhalv10028362m.g Eutrema salsugineum HOM05D006102 ORTHO05D007550 4.0e-85 320.1 566 40.1
Sed0013724 Sechium edule HOM05D006102 ORTHO05D007550 6.8e-85 319.3 709 35.3
Sopen01g036600 Solanum pennellii HOM05D006102 ORTHO05D007550 4.4e-84 316.6 431 45.2
Aa31LG5G130 Aethionema arabicum HOM05D006102 ORTHO05D007550 3.7e-83 313.5 461 42.7
Sc02g0002820 Simmondsia chinensis HOM05D006102 ORTHO05D007550 3.7e-83 313.5 578 39.8
DCAR_015878 Daucus carota HOM05D006102 ORTHO05D007550 1.2e-81 308.5 547 39.9
CAN.G1872.3 Capsicum annuum HOM05D006102 ORTHO05D007550 2.5e-79 300.8 431 45.0
Nitab4.5_0000859g0180 Nicotiana tabacum HOM05D006102 ORTHO05D007550 2.8e-78 297.4 581 38.4
Nitab4.5_0011151g0030 Nicotiana tabacum HOM05D006102 ORTHO05D007550 3.1e-77 293.9 587 37.8
Atru.chr5.236 Acer truncatum HOM05D006102 ORTHO05D007550 5.2e-77 293.1 291 58.4
Oeu032185.2 Olea europaea HOM05D006102 ORTHO05D007550 3.4e-76 290.4 588 37.9
Migut.N01612 Erythranthe guttata HOM05D006102 ORTHO05D007550 1.3e-75 288.5 562 38.6
SGA_v2.0_scaffold11G05526 Striga asiatica HOM05D006102 ORTHO05D007550 2.2e-75 287.7 566 39.6
Aqoxy7G00755 Aquilegia oxysepala HOM05D006102 ORTHO05D007550 3.8e-75 287.0 518 39.0
Lsat_1_v5_gn_3_129280 Lactuca sativa HOM05D006102 ORTHO05D007550 1.2e-73 282.0 681 35.4
Hund27378 Selenicereus undatus HOM05D006102 ORTHO05D007550 6.0e-73 279.6 565 39.8
AUR62013660 Chenopodium quinoa HOM05D006102 ORTHO05D007550 3.3e-71 273.9 520 37.9
PSO017G2680 Papaver somniferum HOM05D006102 ORTHO05D007550 9.6e-71 272.3 575 37.2
HanXRQChr03g0093281 Helianthus annuus HOM05D006102 ORTHO05D007550 8.1e-70 269.2 568 38.6
PSO170G5751 Papaver somniferum HOM05D006102 ORTHO05D007550 1.4e-69 268.5 570 37.4
Cpa.g.sc49.147 Carica papaya HOM05D006102 ORTHO05D007550 9.9e-68 262.3 312 48.4
MSTRG.28175 Avicennia marina HOM05D006102 ORTHO05D007550 2.2e-67 261.2 399 43.1
AUR62004162 Chenopodium quinoa HOM05D006102 ORTHO05D007550 3.8e-67 260.4 431 40.4
ECA240G4781 Erigeron canadensis HOM05D006102 ORTHO05D007550 5.4e-66 256.5 475 39.8
EL10Ac1g00837 Beta vulgaris HOM05D006102 ORTHO05D007550 1.6e-65 255.0 424 41.5
VMungo0331G1545 Vigna mungo HOM05D006102 ORTHO05D007550 2.1e-65 254.6 270 55.2
Cc02_g24460 Coffea canephora HOM05D006102 ORTHO05D007550 5.6e-63 246.5 409 42.3
Ah.05g173810 Amaranthus hybridus HOM05D006102 ORTHO05D007550 6.4e-59 233.0 512 38.7
Cfa011156 Carpinus fangiana HOM05D006102 ORTHO05D007550 1.2e-57 228.8 199 66.8
unitig_748.g7113 Utricularia gibba HOM05D006102 ORTHO05D007550 1.1e-55 222.2 532 35.5
PGSC0003DMG401026018 Solanum tuberosum HOM05D006102 ORTHO05D007550 3.1e-53 214.2 182 59.3
Manes.05G049400 Manihot esculenta HOM05D006102 ORTHO05D007550 1.5e-47 195.3 400 37.0
ATR0317G095 Amborella trichopoda HOM05D006102 ORTHO05D007550 1.6e-46 191.8 446 34.1
Hma1.2p1_0072F.1_g038360 Hydrangea macrophylla HOM05D006102 ORTHO05D007550 4.8e-38 163.7 304 37.8
HPP92_005330 Vanilla planifolia HOM05D006102 ORTHO05D007550 1.4e-37 162.2 280 37.9
Psat0s3685g0040 Pisum sativum HOM05D006102 ORTHO05D007550 1.2e-36 159.1 324 38.0
SEGI_10795 Sequoiadendron giganteum HOM05D006102 ORTHO05D007550 1.5e-36 158.7 403 31.5
QL93p0363_0004 Quercus lobata HOM05D006102 ORTHO05D007550 2.2e-35 154.8 233 45.9
VMungo0331G0964 Vigna mungo HOM05D006102 ORTHO05D007550 1.9e-34 151.8 462 30.7
FvH4_7g11041 Fragaria vesca HOM05D006102 ORTHO05D007550 1.8e-32 145.2 242 45.0
Actinidia12183 Actinidia chinensis HOM05D006102 ORTHO05D007550 2.8e-30 137.9 293 37.2
ClCG05G000200 Citrullus lanatus HOM05D006102 ORTHO05D007550 6.9e-29 133.3 387 31.3
Hma1.2p1_0072F.1_g038370 Hydrangea macrophylla HOM05D006102 ORTHO05D007550 2.0e-28 131.7 281 37.0
MELO3C005957.2 Cucumis melo HOM05D006102 ORTHO05D007550 7.2e-26 123.2 379 30.9
Mapoly0072s0019 Marchantia polymorpha HOM05D006102 ORTHO05D007550 1.8e-21 108.6 439 25.7
Pp3c16_11310 Physcomitrium patens HOM05D006102 ORTHO05D007550 4.2e-18 97.4 409 27.6
Oeu005825.4 Olea europaea HOM05D006102 ORTHO05D007550 7.2e-18 96.7 404 29.5


User provided reference genes

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