Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010994 Carpinus fangiana HOM05D000138 ORTHO05D000078 9.3e-59 229.9 112 100.0
Cfa004563 Carpinus fangiana HOM05D000138 ORTHO05D000078 7.9e-50 200.3 111 90.1
Cfa004042 Carpinus fangiana HOM05D000138 ORTHO05D000078 2.7e-42 175.3 100 86.0
Haze_15371 Corylus avellana HOM05D000138 ORTHO05D000078 1.0e-36 156.8 100 80.0
QL06p040660 Quercus lobata HOM05D000138 ORTHO05D000078 2.6e-21 105.5 104 57.7
Manes.12G106400 Manihot esculenta HOM05D000138 ORTHO05D000078 2.7e-18 95.5 105 53.3
CiPaw.01G015100 Carya illinoinensis HOM05D000138 ORTHO05D000078 1.8e-17 92.8 102 54.9
CiPaw.02G007200 Carya illinoinensis HOM05D000138 ORTHO05D000078 4.0e-17 91.7 102 56.9
RcHm_v2.0_Chr2g0106221 Rosa chinensis HOM05D000138 ORTHO05D000078 5.2e-17 91.3 104 54.8
FAN28G1244 Fragaria x ananassa HOM05D000138 ORTHO05D000078 2.6e-16 89.0 104 52.9
Sabra07G0041300 Salix brachista HOM05D000138 ORTHO05D000078 5.7e-16 87.8 112 50.9
Duzib147G0747 Durio zibethinus HOM05D000138 ORTHO05D000078 9.7e-16 87.0 105 47.6
Dinv26845 Davidia involucrata HOM05D000138 ORTHO05D000078 1.7e-15 86.3 95 55.8
Potri.007G046200 Populus trichocarpa HOM05D000138 ORTHO05D000078 1.7e-15 86.3 115 47.8
FAN23G1671 Fragaria x ananassa HOM05D000138 ORTHO05D000078 2.8e-15 85.5 104 51.0
Duzib264G0574 Durio zibethinus HOM05D000138 ORTHO05D000078 4.8e-15 84.7 106 48.1
FAN26G2578 Fragaria x ananassa HOM05D000138 ORTHO05D000078 6.3e-15 84.3 104 50.0
Potri.005G140700 Populus trichocarpa HOM05D000138 ORTHO05D000078 5.3e-14 81.3 114 49.1
PGSC0003DMG400004006 Solanum tuberosum HOM05D000138 ORTHO05D000078 9.1e-14 80.5 100 47.0
Ciclev10025364m.g Citrus clementina HOM05D000138 ORTHO05D000078 1.2e-13 80.1 105 47.6
Cc07_g06200 Coffea canephora HOM05D000138 ORTHO05D000078 2.7e-13 79.0 109 47.7
Manes.13G120700 Manihot esculenta HOM05D000138 ORTHO05D000078 2.7e-13 79.0 105 47.6
TWI09G1505 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 2.7e-13 79.0 110 47.3
FAN19G1915 Fragaria x ananassa HOM05D000138 ORTHO05D000078 7.7e-13 77.4 103 47.6
FvH4_1g16350 Fragaria vesca HOM05D000138 ORTHO05D000078 1.0e-12 77.0 103 47.6
CANSAT01G1991 Cannabis sativa HOM05D000138 ORTHO05D000078 1.3e-12 76.6 122 45.1
Solyc02g093150.3 Solanum lycopersicum HOM05D000138 ORTHO05D000078 2.2e-12 75.9 100 47.0
Sopen02g037720 Solanum pennellii HOM05D000138 ORTHO05D000078 2.2e-12 75.9 100 46.0
Nitab4.5_0001603g0010 Nicotiana tabacum HOM05D000138 ORTHO05D000078 6.5e-12 74.3 99 48.5
Gohir.A12G072900 Gossypium hirsutum HOM05D000138 ORTHO05D000078 8.5e-12 73.9 109 41.3
Gohir.D12G070800 Gossypium hirsutum HOM05D000138 ORTHO05D000078 1.5e-11 73.2 111 42.3
Thecc.01G060400 Theobroma cacao HOM05D000138 ORTHO05D000078 1.5e-11 73.2 106 45.3
Gorai.008G077800 Gossypium raimondii HOM05D000138 ORTHO05D000078 2.5e-11 72.4 113 41.6
Sabra05G0110600 Salix brachista HOM05D000138 ORTHO05D000078 2.5e-11 72.4 110 43.6
MSTRG.3435 Avicennia marina HOM05D000138 ORTHO05D000078 2.7e-10 68.9 98 45.9
Nitab4.5_0001221g0060 Nicotiana tabacum HOM05D000138 ORTHO05D000078 3.6e-10 68.6 99 46.5
Lsat_1_v5_gn_2_85920 Lactuca sativa HOM05D000138 ORTHO05D000078 4.7e-10 68.2 99 44.4
Hma1.2p1_0670F.1_g200420 Hydrangea macrophylla HOM05D000138 ORTHO05D000078 6.1e-10 67.8 95 49.5
Nn5g30360 Nelumbo nucifera HOM05D000138 ORTHO05D000078 8.0e-10 67.4 107 41.1
VMungo1215G1443 Vigna mungo HOM05D000138 ORTHO05D000078 8.0e-10 67.4 95 43.2
ECA232G3195 Erigeron canadensis HOM05D000138 ORTHO05D000078 1.8e-09 66.2 97 40.2
Oeu014819.1 Olea europaea HOM05D000138 ORTHO05D000078 2.3e-09 65.9 83 51.8
COL.COLO4_11450 Corchorus olitorius HOM05D000138 ORTHO05D000078 5.2e-09 64.7 107 43.9
Lj2g0023594 Lotus japonicus HOM05D000138 ORTHO05D000078 6.8e-09 64.3 96 42.7
Oeu007928.1 Olea europaea HOM05D000138 ORTHO05D000078 8.8e-09 63.9 110 41.8
CsaV3_2G016390 Cucumis sativus L. HOM05D000138 ORTHO05D000078 1.2e-08 63.5 85 49.4
Nitab4.5_0000604g0120 Nicotiana tabacum HOM05D000138 ORTHO05D000078 2.0e-08 62.8 109 44.0
Gorai.007G215900 Gossypium raimondii HOM05D000138 ORTHO05D000078 2.6e-08 62.4 106 38.7
MELO3C020848.2 Cucumis melo HOM05D000138 ORTHO05D000078 4.4e-08 61.6 85 48.2
SHI08773 Sapria himalayana HOM05D000138 ORTHO05D000078 4.4e-08 61.6 109 43.1
TAR376G0226 Trochodendron aralioides HOM05D000138 ORTHO05D000078 4.4e-08 61.6 87 48.3
TAR381G1030 Trochodendron aralioides HOM05D000138 ORTHO05D000078 4.4e-08 61.6 105 41.0
Gohir.A11G195300 Gossypium hirsutum HOM05D000138 ORTHO05D000078 5.7e-08 61.2 106 38.7
Lsat_1_v5_gn_3_89681 Lactuca sativa HOM05D000138 ORTHO05D000078 5.7e-08 61.2 78 46.2
ClCG02G012240 Citrullus lanatus HOM05D000138 ORTHO05D000078 7.5e-08 60.8 100 44.0
Duzib187G0622 Durio zibethinus HOM05D000138 ORTHO05D000078 7.5e-08 60.8 106 40.6
Gorai.011G106200 Gossypium raimondii HOM05D000138 ORTHO05D000078 7.5e-08 60.8 102 39.2
Lalb_Chr09g0323291 Lupinus albus HOM05D000138 ORTHO05D000078 7.5e-08 60.8 104 42.3
Gohir.D10G096900 Gossypium hirsutum HOM05D000138 ORTHO05D000078 9.8e-08 60.5 102 39.2
Gohir.D11G201500 Gossypium hirsutum HOM05D000138 ORTHO05D000078 9.8e-08 60.5 106 37.7
THA.LOC104819850 Tarenaya hassleriana HOM05D000138 ORTHO05D000078 9.8e-08 60.5 90 44.4
Peaxi162Scf00549g00114 Petunia axillaris HOM05D000138 ORTHO05D000078 1.3e-07 60.1 95 43.2
MSTRG.2869 Avicennia marina HOM05D000138 ORTHO05D000078 1.7e-07 59.7 96 45.8
SGA_v2.0_scaffold143G35804 Striga asiatica HOM05D000138 ORTHO05D000078 1.7e-07 59.7 74 44.6
MSTRG.15380 Avicennia marina HOM05D000138 ORTHO05D000078 2.8e-07 58.9 101 46.5
Cpa.g.sc55.116 Carica papaya HOM05D000138 ORTHO05D000078 2.8e-07 58.9 107 39.3
Psat2g168720 Pisum sativum HOM05D000138 ORTHO05D000078 2.8e-07 58.9 105 38.1
THA.LOC104807594 Tarenaya hassleriana HOM05D000138 ORTHO05D000078 2.8e-07 58.9 85 48.2
Gohir.A10G091300 Gossypium hirsutum HOM05D000138 ORTHO05D000078 6.3e-07 57.8 103 41.7
Nn1g04782 Nelumbo nucifera HOM05D000138 ORTHO05D000078 6.3e-07 57.8 106 38.7
Actinidia12034 Actinidia chinensis HOM05D000138 ORTHO05D000078 1.4e-06 56.6 101 41.6
Ca_22148_v3 Cicer arietinum L. HOM05D000138 ORTHO05D000078 1.4e-06 56.6 103 42.7
vmacro05312 Vaccinium macrocarpon HOM05D000138 ORTHO05D000078 1.4e-06 56.6 98 38.8
CAN.G370.36 Capsicum annuum HOM05D000138 ORTHO05D000078 3.1e-06 55.5 111 36.0
Oeu009819.2 Olea europaea HOM05D000138 ORTHO05D000078 3.1e-06 55.5 103 39.8
CAN.G165.8 Capsicum annuum HOM05D000138 ORTHO05D000078 4.1e-06 55.1 112 42.0
Phvul.002G016900 Phaseolus vulgaris HOM05D000138 ORTHO05D000078 4.1e-06 55.1 97 39.2
Solyc02g064960.3 Solanum lycopersicum HOM05D000138 ORTHO05D000078 4.1e-06 55.1 121 38.0
unitig_748.g8399 Utricularia gibba HOM05D000138 ORTHO05D000078 5.4e-06 54.7 99 43.4
BcaNung02963 Brassica carinata HOM05D000138 ORTHO05D000078 7.0e-06 54.3 90 44.4
Sopen02g015090 Solanum pennellii HOM05D000138 ORTHO05D000078 7.0e-06 54.3 121 38.0
TWI73G0321 Tripterygium wilfordii HOM05D000138 ORTHO05D000078 7.0e-06 54.3 107 42.1
CSS0018330 Camellia sinensis var. sinensis HOM05D000138 ORTHO05D000078 9.1e-06 53.9 98 39.8
ECA246G0179 Erigeron canadensis HOM05D000138 ORTHO05D000078 9.1e-06 53.9 105 41.0


User provided reference genes

Program Settings