Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010947 Carpinus fangiana HOM05D004624 ORTHO05D005357 7.8e-33 143.3 76 100.0
Haze_02997 Corylus avellana HOM05D004624 ORTHO05D005357 4.0e-29 131.0 76 92.1
Cfa019982 Carpinus fangiana HOM05D004624 ORTHO05D005357 3.4e-28 127.9 78 91.0
Haze_20251 Corylus avellana HOM05D004624 ORTHO05D005357 7.5e-28 126.7 78 89.7
CiPaw.10G042300 Carya illinoinensis HOM05D004624 ORTHO05D005357 2.3e-24 115.2 76 81.6
Ciclev10010500m.g Citrus clementina HOM05D004624 ORTHO05D005357 1.1e-23 112.8 74 81.1
Lj1g0004051 Lotus japonicus HOM05D004624 ORTHO05D005357 2.5e-23 111.7 76 81.6
COL.COLO4_05868 Corchorus olitorius HOM05D004624 ORTHO05D005357 4.3e-23 110.9 72 83.3
Gorai.008G288400 Gossypium raimondii HOM05D004624 ORTHO05D005357 4.3e-23 110.9 75 81.3
PGR142G2854 Punica granatum HOM05D004624 ORTHO05D005357 5.6e-23 110.5 70 84.3
Rhsim13G0121200 Rhododendron simsii HOM05D004624 ORTHO05D005357 5.6e-23 110.5 70 80.0
CSS0035187 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 7.3e-23 110.2 70 81.4
Gohir.D07G118600 Gossypium hirsutum HOM05D004624 ORTHO05D005357 7.3e-23 110.2 75 80.0
Lalb_Chr19g0128161 Lupinus albus HOM05D004624 ORTHO05D005357 7.3e-23 110.2 76 81.6
vmacro17426 Vaccinium macrocarpon HOM05D004624 ORTHO05D005357 7.3e-23 110.2 75 78.7
Cpa.g.sc116.84 Carica papaya HOM05D004624 ORTHO05D005357 9.5e-23 109.8 74 79.7
Gorai.001G127500 Gossypium raimondii HOM05D004624 ORTHO05D005357 9.5e-23 109.8 75 78.7
Gohir.A07G114500 Gossypium hirsutum HOM05D004624 ORTHO05D005357 1.2e-22 109.4 75 80.0
Gohir.D12G268300 Gossypium hirsutum HOM05D004624 ORTHO05D005357 1.2e-22 109.4 75 80.0
Thecc.03G049000 Theobroma cacao HOM05D004624 ORTHO05D005357 1.2e-22 109.4 71 80.3
vmacro08998 Vaccinium macrocarpon HOM05D004624 ORTHO05D005357 1.2e-22 109.4 70 80.0
Lj4g0019310 Lotus japonicus HOM05D004624 ORTHO05D005357 1.6e-22 109.0 76 78.9
Atru.chr12.1276 Acer truncatum HOM05D004624 ORTHO05D005357 2.1e-22 108.6 74 81.1
Duzib205G0906 Durio zibethinus HOM05D004624 ORTHO05D005357 2.8e-22 108.2 71 80.3
Hma1.2p1_0223F.1_g094210 Hydrangea macrophylla HOM05D004624 ORTHO05D005357 2.8e-22 108.2 68 85.3
CSS0023921 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 3.6e-22 107.8 69 82.6
CSS0026932 Camellia sinensis var. sinensis HOM05D004624 ORTHO05D005357 3.6e-22 107.8 75 77.3
Glyma.01G100100 Glycine max HOM05D004624 ORTHO05D005357 3.6e-22 107.8 74 79.7
Sabra06G0024000 Salix brachista HOM05D004624 ORTHO05D005357 3.6e-22 107.8 66 83.3
Sabra16G0036900 Salix brachista HOM05D004624 ORTHO05D005357 4.7e-22 107.5 68 82.4
Glyma.03G068900 Glycine max HOM05D004624 ORTHO05D005357 6.2e-22 107.1 58 91.4
Potri.016G034200 Populus trichocarpa HOM05D004624 ORTHO05D005357 6.2e-22 107.1 68 82.4
arahy.Tifrunner.gnm1.ann1.QE2DSJ Arachis hypogaea HOM05D004624 ORTHO05D005357 8.1e-22 106.7 76 77.6
Manes.15G024800 Manihot esculenta HOM05D004624 ORTHO05D005357 8.1e-22 106.7 68 79.4
Manes.10G062600 Manihot esculenta HOM05D004624 ORTHO05D005357 1.1e-21 106.3 73 79.5
QL07p012089 Quercus lobata HOM05D004624 ORTHO05D005357 1.1e-21 106.3 79 74.7
GSVIVG01025772001 Vitis vinifera HOM05D004624 ORTHO05D005357 1.8e-21 105.5 72 79.2
DCAR_020589 Daucus carota HOM05D004624 ORTHO05D005357 2.3e-21 105.1 77 74.0
Dinv15634 Davidia involucrata HOM05D004624 ORTHO05D005357 2.3e-21 105.1 69 81.2
GSVIVG01021751001 Vitis vinifera HOM05D004624 ORTHO05D005357 2.3e-21 105.1 73 71.2
MD03G1113900 Malus domestica HOM05D004624 ORTHO05D005357 3.1e-21 104.8 74 77.0
Potri.006G035900 Populus trichocarpa HOM05D004624 ORTHO05D005357 3.1e-21 104.8 66 81.8
arahy.Tifrunner.gnm1.ann1.Q8D3CZ Arachis hypogaea HOM05D004624 ORTHO05D005357 4.0e-21 104.4 75 73.3
Phvul.001G120800 Phaseolus vulgaris HOM05D004624 ORTHO05D005357 4.0e-21 104.4 72 79.2
Ah.13g077180 Amaranthus hybridus HOM05D004624 ORTHO05D005357 5.2e-21 104.0 68 77.9
AUR62018375 Chenopodium quinoa HOM05D004624 ORTHO05D005357 5.2e-21 104.0 69 79.7
Lalb_Chr19g0128151 Lupinus albus HOM05D004624 ORTHO05D005357 5.2e-21 104.0 76 77.6
RcHm_v2.0_Chr7g0222161 Rosa chinensis HOM05D004624 ORTHO05D005357 5.2e-21 104.0 59 86.4
Sed0025002 Sechium edule HOM05D004624 ORTHO05D005357 5.2e-21 104.0 62 82.3
Prupe.8G075600 Prunus persica HOM05D004624 ORTHO05D005357 6.8e-21 103.6 72 77.8
Rhsim04G0113600 Rhododendron simsii HOM05D004624 ORTHO05D005357 6.8e-21 103.6 66 80.3
ClCG11G007400 Citrullus lanatus HOM05D004624 ORTHO05D005357 8.9e-21 103.2 68 80.9
MELO3C008583.2 Cucumis melo HOM05D004624 ORTHO05D005357 8.9e-21 103.2 73 76.7
CsaV3_2G010390 Cucumis sativus L. HOM05D004624 ORTHO05D005357 8.9e-21 103.2 68 80.9
Nn7g37680 Nelumbo nucifera HOM05D004624 ORTHO05D005357 8.9e-21 103.2 65 76.9
Psat0s1206g0080 Pisum sativum HOM05D004624 ORTHO05D005357 8.9e-21 103.2 68 77.9
AUR62030290 Chenopodium quinoa HOM05D004624 ORTHO05D005357 1.2e-20 102.8 69 78.3
COL.COLO4_37401 Corchorus olitorius HOM05D004624 ORTHO05D005357 1.2e-20 102.8 70 81.4
Medtr2g008230 Medicago truncatula HOM05D004624 ORTHO05D005357 1.2e-20 102.8 58 84.5
Medtr4g124060 Medicago truncatula HOM05D004624 ORTHO05D005357 1.2e-20 102.8 58 84.5
TAR633G0121 Trochodendron aralioides HOM05D004624 ORTHO05D005357 1.2e-20 102.8 74 71.6
BraA07t30607Z Brassica rapa HOM05D004624 ORTHO05D005357 1.5e-20 102.4 63 82.5
DCAR_028787 Daucus carota HOM05D004624 ORTHO05D005357 1.5e-20 102.4 58 86.2
FvH4_5g29300 Fragaria vesca HOM05D004624 ORTHO05D005357 1.5e-20 102.4 59 84.7
FAN13G0550 Fragaria x ananassa HOM05D004624 ORTHO05D005357 1.5e-20 102.4 59 84.7
FAN18G4513 Fragaria x ananassa HOM05D004624 ORTHO05D005357 1.5e-20 102.4 59 84.7
PSO541G4755 Papaver somniferum HOM05D004624 ORTHO05D005357 1.5e-20 102.4 62 79.0
Sc13g0000990 Simmondsia chinensis HOM05D004624 ORTHO05D005357 1.5e-20 102.4 72 73.6
THA.LOC109116606 Tarenaya hassleriana HOM05D004624 ORTHO05D005357 1.5e-20 102.4 58 87.9
TPR.G12609 Trifolium pratense HOM05D004624 ORTHO05D005357 1.5e-20 102.4 58 82.8
Eucgr.K01650 Eucalyptus grandis HOM05D004624 ORTHO05D005357 2.0e-20 102.1 65 80.0
Nitab4.5_0000021g0900 Nicotiana tabacum HOM05D004624 ORTHO05D005357 2.0e-20 102.1 75 70.7
Peaxi162Scf00516g00035 Petunia axillaris HOM05D004624 ORTHO05D005357 2.0e-20 102.1 74 68.9
BcaB03g15728 Brassica carinata HOM05D004624 ORTHO05D005357 2.6e-20 101.7 58 87.9
C06p33840 Brassica napus HOM05D004624 ORTHO05D005357 2.6e-20 101.7 58 87.9
CANSAT78G0048 Cannabis sativa HOM05D004624 ORTHO05D005357 2.6e-20 101.7 64 82.8
CANSAT78G2147 Cannabis sativa HOM05D004624 ORTHO05D005357 2.6e-20 101.7 64 82.8
Ca_07684_v3 Cicer arietinum L. HOM05D004624 ORTHO05D005357 2.6e-20 101.7 67 77.6
TWI53G0657 Tripterygium wilfordii HOM05D004624 ORTHO05D005357 2.6e-20 101.7 72 75.0
Aqoxy3G00212 Aquilegia oxysepala HOM05D004624 ORTHO05D005357 3.4e-20 101.3 68 76.5
AL6G43100 Arabidopsis lyrata HOM05D004624 ORTHO05D005357 3.4e-20 101.3 58 86.2
AT4G09550 Arabidopsis thaliana HOM05D004624 ORTHO05D005357 3.4e-20 101.3 58 86.2
CARHR260420 Cardamine hirsuta HOM05D004624 ORTHO05D005357 3.4e-20 101.3 58 86.2
PGSC0003DMG400026480 Solanum tuberosum HOM05D004624 ORTHO05D005357 3.4e-20 101.3 64 78.1
HanXRQChr11g0352301 Helianthus annuus HOM05D004624 ORTHO05D005357 4.4e-20 100.9 68 76.5
Nitab4.5_0000645g0040 Nicotiana tabacum HOM05D004624 ORTHO05D005357 4.4e-20 100.9 73 72.6
Sp5g28970 Schrenkiella parvula HOM05D004624 ORTHO05D005357 4.4e-20 100.9 58 86.2
BcaB03g15084 Brassica carinata HOM05D004624 ORTHO05D005357 5.8e-20 100.5 62 82.3
BcaC08g46798 Brassica carinata HOM05D004624 ORTHO05D005357 5.8e-20 100.5 58 86.2
C06p47930 Brassica napus HOM05D004624 ORTHO05D005357 5.8e-20 100.5 58 86.2
BolC6t39828H Brassica oleracea HOM05D004624 ORTHO05D005357 5.8e-20 100.5 58 86.2
BraA07t31513Z Brassica rapa HOM05D004624 ORTHO05D005357 5.8e-20 100.5 58 86.2
Thhalv10019414m.g Eutrema salsugineum HOM05D004624 ORTHO05D005357 5.8e-20 100.5 62 82.3
Nitab4.5_0003447g0020 Nicotiana tabacum HOM05D004624 ORTHO05D005357 5.8e-20 100.5 63 77.8
RcHm_v2.0_Chr1g0330241 Rosa chinensis HOM05D004624 ORTHO05D005357 5.8e-20 100.5 60 81.7
Sabra16G0054100 Salix brachista HOM05D004624 ORTHO05D005357 5.8e-20 100.5 62 83.9
TPR.G16719 Trifolium pratense HOM05D004624 ORTHO05D005357 5.8e-20 100.5 58 81.0
Cc03_g11260 Coffea canephora HOM05D004624 ORTHO05D005357 7.5e-20 100.1 75 73.3
Sopen06g029060 Solanum pennellii HOM05D004624 ORTHO05D005357 7.5e-20 100.1 68 75.0
TWI74G0338 Tripterygium wilfordii HOM05D004624 ORTHO05D005357 7.5e-20 100.1 67 79.1
Migut.J01633 Erythranthe guttata HOM05D004624 ORTHO05D005357 9.9e-20 99.8 75 66.7
PSO675G0528 Papaver somniferum HOM05D004624 ORTHO05D005357 9.9e-20 99.8 62 77.4
Aqoxy3G02929 Aquilegia oxysepala HOM05D004624 ORTHO05D005357 1.3e-19 99.4 70 75.7
BcaC08g45622 Brassica carinata HOM05D004624 ORTHO05D005357 1.3e-19 99.4 58 86.2
Carub.0006s2800 Capsella rubella HOM05D004624 ORTHO05D005357 1.3e-19 99.4 58 84.5
FAN08G1983 Fragaria x ananassa HOM05D004624 ORTHO05D005357 1.3e-19 99.4 59 83.1
Nitab4.5_0002193g0050 Nicotiana tabacum HOM05D004624 ORTHO05D005357 1.7e-19 99.0 73 72.6
PSO063G3723 Papaver somniferum HOM05D004624 ORTHO05D005357 1.7e-19 99.0 62 75.8
Aa31LG4G10460 Aethionema arabicum HOM05D004624 ORTHO05D005357 2.2e-19 98.6 58 82.8
Sp6g08080 Schrenkiella parvula HOM05D004624 ORTHO05D005357 2.2e-19 98.6 58 84.5
ECA248G3900 Erigeron canadensis HOM05D004624 ORTHO05D005357 2.9e-19 98.2 77 71.4
CAN.G732.25 Capsicum annuum HOM05D004624 ORTHO05D005357 3.7e-19 97.8 71 70.4
Migut.J01336 Erythranthe guttata HOM05D004624 ORTHO05D005357 3.7e-19 97.8 58 79.3
Sopen03g028160 Solanum pennellii HOM05D004624 ORTHO05D005357 3.7e-19 97.8 74 68.9
Actinidia05484 Actinidia chinensis HOM05D004624 ORTHO05D005357 4.9e-19 97.4 58 87.9
Migut.J01335 Erythranthe guttata HOM05D004624 ORTHO05D005357 4.9e-19 97.4 58 79.3
CAN.G65.122 Capsicum annuum HOM05D004624 ORTHO05D005357 6.4e-19 97.1 69 72.5
QL04p073121 Quercus lobata HOM05D004624 ORTHO05D005357 6.4e-19 97.1 55 87.3
AL2G33600 Arabidopsis lyrata HOM05D004624 ORTHO05D005357 1.4e-18 95.9 62 75.8
AT1G73790 Arabidopsis thaliana HOM05D004624 ORTHO05D005357 1.4e-18 95.9 62 75.8
Carub.0002s2054 Capsella rubella HOM05D004624 ORTHO05D005357 1.4e-18 95.9 68 73.5
Cpa.g.sc883.1 Carica papaya HOM05D004624 ORTHO05D005357 1.4e-18 95.9 62 79.0
ECA238G3634 Erigeron canadensis HOM05D000185 ORTHO05D000105 1.4e-18 95.9 74 66.2
Nitab4.5_0006270g0030 Nicotiana tabacum HOM05D004624 ORTHO05D005357 1.4e-18 95.9 73 71.2
Thecc.05G198400 Theobroma cacao HOM05D004624 ORTHO05D005357 1.9e-18 95.5 69 76.8
Nitab4.5_0006185g0060 Nicotiana tabacum HOM05D004624 ORTHO05D005357 3.2e-18 94.7 58 77.6
Peaxi162Scf00815g00038 Petunia axillaris HOM05D004624 ORTHO05D005357 7.1e-18 93.6 73 64.4
CARHR066880 Cardamine hirsuta HOM05D004624 ORTHO05D005357 1.6e-17 92.4 62 74.2
CDE05G2943 Ceratophyllum demersum HOM05D004624 ORTHO05D005357 2.7e-17 91.7 74 63.5
unitig_746.g26892 Utricularia gibba HOM05D004624 ORTHO05D005357 2.7e-17 91.7 61 72.1
SHI11762 Sapria himalayana HOM05D004624 ORTHO05D005357 4.6e-17 90.9 58 77.6
MBI17_g08328_MAGBIO Magnolia biondii HOM05D004624 ORTHO05D005357 1.3e-16 89.4 54 77.8
TAR627G0533 Trochodendron aralioides HOM05D004624 ORTHO05D005357 8.6e-16 86.7 63 66.7
Os03g0435900 Oryza sativa ssp. japonica HOM05D004624 ORTHO05D005357 1.2e-14 82.8 67 65.7
Os11g0368172 Oryza sativa ssp. japonica HOM05D004624 ORTHO05D005357 1.2e-14 82.8 67 65.7
Os03g0824000 Oryza sativa ssp. japonica HOM05D004624 ORTHO05D005357 1.6e-14 82.4 66 65.2
Pp3c13_4560 Physcomitrium patens HOM05D004624 ORTHO05D005357 2.1e-14 82.0 72 63.9
EL10Ac4g09929 Beta vulgaris HOM05D004624 ORTHO05D005357 2.8e-14 81.6 55 70.9
FvH4_2g13790 Fragaria vesca HOM05D004624 ORTHO05D005357 2.8e-14 81.6 63 65.1
FAN24G0569 Fragaria x ananassa HOM05D004624 ORTHO05D005357 2.8e-14 81.6 63 65.1
Atru.chr12.1164 Acer truncatum HOM05D004624 ORTHO05D005357 6.2e-14 80.5 50 84.0
PRCOL_00005147 Prasinoderma coloniale HOM05D004624 ORTHO05D005357 6.2e-14 80.5 58 67.2
MD11G1133700 Malus domestica HOM05D004624 ORTHO05D005357 1.4e-13 79.3 41 92.7
Zm00001eb062930 Zea mays HOM05D004624 ORTHO05D005357 1.4e-13 79.3 69 60.9
AagrBONN_evm.TU.Sc2ySwM_340.447 Anthoceros agrestis HOM05D004624 ORTHO05D005357 4.0e-13 77.8 58 63.8
Pp3c12_8260 Physcomitrium patens HOM05D004624 ORTHO05D005357 4.0e-13 77.8 58 69.0
CBR_g23420 Chara braunii HOM05D004624 ORTHO05D005357 5.2e-13 77.4 58 65.5
Solyc03g097400.1 Solanum lycopersicum HOM05D004624 ORTHO05D005357 2.0e-12 75.5 46 80.4
SMO172G0211 Selaginella moellendorffii HOM05D004624 ORTHO05D005357 2.6e-12 75.1 50 74.0
SalBow6G5026 Salvia bowleyana HOM05D004624 ORTHO05D005357 4.4e-12 74.3 55 67.3
MCO02G029 Micromonas commoda HOM05D004624 ORTHO05D005357 1.3e-11 72.8 58 62.1
Mapoly0109s0047 Marchantia polymorpha HOM05D004624 ORTHO05D005357 1.7e-11 72.4 58 60.3
Solyc06g072690.3 Solanum lycopersicum HOM05D004624 ORTHO05D005357 3.8e-11 71.2 55 70.9
HPP92_018529 Vanilla planifolia HOM05D004624 ORTHO05D005357 6.4e-11 70.5 72 54.2
Lsat_1_v5_gn_1_43120 Lactuca sativa HOM05D004624 ORTHO05D005357 3.0e-08 61.6 32 93.8
Cre14.g610000 Chlamydomonas reinhardtii HOM05D004624 ORTHO05D005357 6.6e-08 60.5 57 52.6


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