Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010943 Carpinus fangiana HOM05D005138 ORTHO05D006318 2.0e-68 262.3 132 100.0
Haze_03004 Corylus avellana HOM05D005138 ORTHO05D006318 1.2e-65 253.1 132 95.5
CiPaw.14G008900 Carya illinoinensis HOM05D005138 ORTHO05D006318 4.8e-62 241.1 131 88.5
CiPaw.13G015300 Carya illinoinensis HOM05D005138 ORTHO05D006318 6.9e-61 237.3 131 88.5
Duzib128G1035 Durio zibethinus HOM05D005138 ORTHO05D006318 1.1e-58 229.9 131 83.2
Hma1.2p1_0837F.1_g226140 Hydrangea macrophylla HOM05D005138 ORTHO05D006318 1.9e-58 229.2 131 80.9
TAR362G0697 Trochodendron aralioides HOM05D005138 ORTHO05D006318 2.4e-58 228.8 131 80.9
Duzib114G0920 Durio zibethinus HOM05D005138 ORTHO05D006318 4.2e-58 228.0 131 82.4
Dinv44706 Davidia involucrata HOM05D005138 ORTHO05D006318 1.6e-57 226.1 131 82.4
Sed0002262 Sechium edule HOM05D005138 ORTHO05D006318 2.1e-57 225.7 131 80.2
Thecc.10G149000 Theobroma cacao HOM05D005138 ORTHO05D006318 2.7e-57 225.3 131 82.4
MELO3C012486.2 Cucumis melo HOM05D005138 ORTHO05D006318 1.3e-56 223.0 139 78.4
Gorai.011G218700 Gossypium raimondii HOM05D005138 ORTHO05D006318 1.3e-56 223.0 131 80.2
Prupe.2G041500 Prunus persica HOM05D005138 ORTHO05D006318 1.8e-56 222.6 131 82.4
PGR044G2178 Punica granatum HOM05D005138 ORTHO05D006318 1.8e-56 222.6 131 79.4
arahy.Tifrunner.gnm1.ann1.EVE7SV Arachis hypogaea HOM05D005138 ORTHO05D006318 2.3e-56 222.2 131 82.4
Manes.11G007200 Manihot esculenta HOM05D005138 ORTHO05D006318 3.0e-56 221.9 131 80.9
CsaV3_5G036890 Cucumis sativus L. HOM05D005138 ORTHO05D006318 3.9e-56 221.5 127 83.5
arahy.Tifrunner.gnm1.ann1.K7P4IE Arachis hypogaea HOM05D005138 ORTHO05D006318 6.7e-56 220.7 131 81.7
FAN03G2670 Fragaria x ananassa HOM05D005138 ORTHO05D006318 6.7e-56 220.7 131 80.2
FAN06G4838 Fragaria x ananassa HOM05D005138 ORTHO05D006318 6.7e-56 220.7 131 80.2
Gohir.D10G195900 Gossypium hirsutum HOM05D005138 ORTHO05D006318 6.7e-56 220.7 131 79.4
MD02G1279300 Malus domestica HOM05D005138 ORTHO05D006318 6.7e-56 220.7 131 80.9
Gohir.A10G188000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 1.1e-55 219.9 131 78.6
MD07G1047200 Malus domestica HOM05D005138 ORTHO05D006318 1.1e-55 219.9 131 80.9
RcHm_v2.0_Chr1g0325871 Rosa chinensis HOM05D005138 ORTHO05D006318 1.5e-55 219.5 131 80.2
Manes.04G157100 Manihot esculenta HOM05D005138 ORTHO05D006318 1.9e-55 219.2 131 79.4
Eucgr.G03216 Eucalyptus grandis HOM05D005138 ORTHO05D006318 3.3e-55 218.4 131 79.4
Cc07_g21240 Coffea canephora HOM05D005138 ORTHO05D006318 4.3e-55 218.0 131 79.4
Cpa.g.sc169.49 Carica papaya HOM05D005138 ORTHO05D006318 5.6e-55 217.6 131 81.7
vmacro10390 Vaccinium macrocarpon HOM05D005138 ORTHO05D006318 7.4e-55 217.2 131 79.4
FvH4_7g03540 Fragaria vesca HOM05D005138 ORTHO05D006318 1.6e-54 216.1 131 78.6
HanXRQChr11g0341771 Helianthus annuus HOM05D005138 ORTHO05D006318 1.6e-54 216.1 131 78.6
FAN10G0593 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.1e-54 215.7 131 78.6
FAN10G2449 Fragaria x ananassa HOM05D005138 ORTHO05D006318 2.1e-54 215.7 131 78.6
Zm00001eb001400 Zea mays HOM05D005138 ORTHO05D006318 2.1e-54 215.7 131 77.1
Actinidia34769 Actinidia chinensis HOM05D005138 ORTHO05D006318 2.8e-54 215.3 131 79.4
Os07g0640100 Oryza sativa ssp. japonica HOM05D005138 ORTHO05D006318 3.7e-54 214.9 131 78.6
PSO384G1335 Papaver somniferum HOM05D005138 ORTHO05D006318 8.1e-54 213.8 131 77.1
Hund13385 Selenicereus undatus HOM05D005138 ORTHO05D006318 8.1e-54 213.8 123 82.9
PSO135G0826 Papaver somniferum HOM05D005138 ORTHO05D006318 1.1e-53 213.4 131 77.1
CANSAT56G0322 Cannabis sativa HOM05D005138 ORTHO05D006318 1.4e-53 213.0 131 76.3
CDE04G1620 Ceratophyllum demersum HOM05D005138 ORTHO05D006318 2.4e-53 212.2 131 75.6
Lsat_1_v5_gn_1_116501 Lactuca sativa HOM05D005138 ORTHO05D006318 4.0e-53 211.5 132 75.8
QL04p018722 Quercus lobata HOM05D005138 ORTHO05D006318 5.3e-53 211.1 131 74.8
CSS0020361 Camellia sinensis var. sinensis HOM05D005138 ORTHO05D006318 2.0e-52 209.1 128 77.3
DCAR_029715 Daucus carota HOM05D005138 ORTHO05D006318 3.4e-52 208.4 131 75.6
Medtr8g040150 Medicago truncatula HOM05D005138 ORTHO05D006318 5.8e-52 207.6 132 75.8
HPP92_021197 Vanilla planifolia HOM05D005138 ORTHO05D006318 5.8e-52 207.6 134 76.1
Atru.chr12.1279 Acer truncatum HOM05D005138 ORTHO05D006318 7.6e-52 207.2 131 72.5
Aqoxy2G00421 Aquilegia oxysepala HOM05D005138 ORTHO05D006318 7.6e-52 207.2 131 75.6
Sc10g0004520 Simmondsia chinensis HOM05D005138 ORTHO05D006318 7.6e-52 207.2 124 78.2
AUR62031745 Chenopodium quinoa HOM05D005138 ORTHO05D006318 9.9e-52 206.8 128 75.8
AUR62032630 Chenopodium quinoa HOM05D005138 ORTHO05D006318 9.9e-52 206.8 128 75.8
Psat4g099920 Pisum sativum HOM05D005138 ORTHO05D006318 9.9e-52 206.8 132 74.2
THA.LOC104826756 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 9.9e-52 206.8 130 74.6
MBI13_g09225_MAGBIO Magnolia biondii HOM05D005138 ORTHO05D006318 1.7e-51 206.1 131 72.5
ATR1096G082 Amborella trichopoda HOM05D005138 ORTHO05D006318 2.2e-51 205.7 131 72.5
TPR.G8538 Trifolium pratense HOM05D005138 ORTHO05D006318 2.2e-51 205.7 132 74.2
Ciclev10002826m.g Citrus clementina HOM05D005138 ORTHO05D006318 3.8e-51 204.9 131 71.8
TWI74G0500 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 4.9e-51 204.5 131 74.0
SGA_v2.0_scaffold43G16284 Striga asiatica HOM05D005138 ORTHO05D006318 1.4e-50 203.0 131 72.5
Lalb_Chr03g0032141 Lupinus albus HOM05D005138 ORTHO05D006318 7.1e-50 200.7 129 76.0
VMungo1127G1184 Vigna mungo HOM05D005138 ORTHO05D006318 9.3e-50 200.3 131 77.9
Ah.10g030100 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.6e-49 199.5 131 73.3
Ca_23972_v3 Cicer arietinum L. HOM05D005138 ORTHO05D006318 1.6e-49 199.5 132 72.0
Lj3g0022103 Lotus japonicus HOM05D005138 ORTHO05D006318 1.6e-49 199.5 132 75.8
Glyma.15G231900 Glycine max HOM05D005138 ORTHO05D006318 2.7e-49 198.7 128 77.3
Hund15745 Selenicereus undatus HOM05D005138 ORTHO05D006318 3.5e-49 198.4 131 75.6
Aqoxy2G00420 Aquilegia oxysepala HOM05D000001 ORTHO05D007291 7.9e-49 197.2 129 73.6
SGA_v2.0_scaffold232G43489 Striga asiatica HOM05D005138 ORTHO05D006318 7.9e-49 197.2 131 71.0
Ah.12g059980 Amaranthus hybridus HOM05D005138 ORTHO05D006318 1.0e-48 196.8 128 73.4
Nitab4.5_0010402g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 1.0e-48 196.8 131 70.2
Glyma.09G091002 Glycine max HOM05D005138 ORTHO05D006318 2.3e-48 195.7 128 76.6
Glyma.13G193600 Glycine max HOM05D005138 ORTHO05D006318 3.0e-48 195.3 128 76.6
Sopen01g016660 Solanum pennellii HOM05D005138 ORTHO05D006318 3.0e-48 195.3 131 71.8
THA.LOC104799320 Tarenaya hassleriana HOM05D005138 ORTHO05D006318 3.0e-48 195.3 130 73.1
EL10Ac2g02769 Beta vulgaris HOM05D005138 ORTHO05D000392 3.9e-48 194.9 128 71.1
Aa31LG3G6480 Aethionema arabicum HOM05D005138 ORTHO05D006318 6.7e-48 194.1 129 71.3
A03p37550 Brassica napus HOM05D005138 ORTHO05D006318 1.1e-47 193.4 129 70.5
Solyc01g022750.3 Solanum lycopersicum HOM05D005138 ORTHO05D006318 1.1e-47 193.4 131 71.0
PGSC0003DMG400004276 Solanum tuberosum HOM05D005138 ORTHO05D006318 1.5e-47 193.0 131 69.5
BcaB04g18689 Brassica carinata HOM05D005138 ORTHO05D006318 1.9e-47 192.6 129 70.5
TWI38G0338 Tripterygium wilfordii HOM05D005138 ORTHO05D006318 1.9e-47 192.6 130 68.5
Phvul.011G203300 Phaseolus vulgaris HOM05D005138 ORTHO05D006318 2.5e-47 192.2 131 73.3
Thhalv10021751m.g Eutrema salsugineum HOM05D005138 ORTHO05D006318 3.3e-47 191.8 129 69.8
BcaC09g48226 Brassica carinata HOM05D005138 ORTHO05D006318 4.3e-47 191.4 129 69.8
C01p53060 Brassica napus HOM05D005138 ORTHO05D006318 4.3e-47 191.4 129 69.8
C03p45540 Brassica napus HOM05D005138 ORTHO05D006318 4.3e-47 191.4 129 69.8
AT3G12260 Arabidopsis thaliana HOM05D005138 ORTHO05D006318 9.6e-47 190.3 129 68.2
Carub.0003s1162 Capsella rubella HOM05D005138 ORTHO05D006318 9.6e-47 190.3 129 68.2
Sp3g10480 Schrenkiella parvula HOM05D005138 ORTHO05D006318 9.6e-47 190.3 129 69.8
CARHR086810 Cardamine hirsuta HOM05D005138 ORTHO05D006318 1.6e-46 189.5 129 68.2
Sabra01G0021400 Salix brachista HOM05D005138 ORTHO05D006318 1.6e-46 189.5 130 70.8
Migut.N01855 Erythranthe guttata HOM05D005138 ORTHO05D006318 2.1e-46 189.1 131 67.9
AL3G23920 Arabidopsis lyrata HOM05D005138 ORTHO05D006318 2.8e-46 188.7 129 67.4
Potri.001G029900 Populus trichocarpa HOM05D005138 ORTHO05D006318 1.4e-45 186.4 130 69.2
CAN.G1362.7 Capsicum annuum HOM05D005138 ORTHO05D006318 1.8e-45 186.0 127 70.1
A05p37100 Brassica napus HOM05D005138 ORTHO05D006318 4.0e-45 184.9 138 66.7
C05p55530 Brassica napus HOM05D005138 ORTHO05D006318 4.0e-45 184.9 138 66.7
BraA05t22507Z Brassica rapa HOM05D005138 ORTHO05D006318 4.0e-45 184.9 138 66.7
unitig_899.g15579 Utricularia gibba HOM05D005138 ORTHO05D006318 5.3e-45 184.5 131 68.7
BolC3t16831H Brassica oleracea HOM05D005138 ORTHO05D006318 6.9e-45 184.1 138 65.2
BolC5t34219H Brassica oleracea HOM05D005138 ORTHO05D006318 1.2e-44 183.3 138 65.9
BraA03t12909Z Brassica rapa HOM05D005138 ORTHO05D006318 1.2e-44 183.3 139 64.7
BolC1t05249H Brassica oleracea HOM05D005138 ORTHO05D006318 2.6e-44 182.2 142 63.4
Nitab4.5_0004389g0010 Nicotiana tabacum HOM05D005138 ORTHO05D006318 7.6e-44 180.6 156 59.0
SalBow5G1163 Salvia bowleyana HOM05D005138 ORTHO05D006318 1.4e-42 176.4 170 54.1
MSTRG.5074 Avicennia marina HOM05D005138 ORTHO05D006318 1.0e-40 170.2 131 62.6
Nitab4.5_0000254g0180 Nicotiana tabacum HOM05D005138 ORTHO05D006318 3.0e-40 168.7 131 64.9
Peaxi162Scf00062g02216 Petunia axillaris HOM05D005138 ORTHO05D006318 1.5e-39 166.4 131 62.6
ECA248G2587 Erigeron canadensis HOM05D005138 ORTHO05D006318 5.7e-39 164.5 104 76.9
Peaxi162Scf01042g00115 Petunia axillaris HOM05D005138 ORTHO05D006318 4.1e-37 158.3 131 59.5
Actinidia38920 Actinidia chinensis HOM05D005138 ORTHO05D006318 7.6e-36 154.1 131 62.6
GSVIVG01036643001 Vitis vinifera HOM05D005138 ORTHO05D006318 2.9e-35 152.1 93 78.5
Pp3c1_37620 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.5e-34 149.1 129 58.1
Mapoly0055s0110 Marchantia polymorpha HOM05D005138 ORTHO05D006318 5.5e-34 147.9 127 55.9
Pp3c2_3180 Physcomitrium patens HOM05D005138 ORTHO05D006318 2.1e-33 146.0 129 57.4
PGSC0003DMG400005271 Solanum tuberosum HOM05D005138 ORTHO05D006318 8.7e-32 140.6 93 72.0
CBR_g52457 Chara braunii HOM05D005138 ORTHO05D006318 7.4e-31 137.5 132 53.0
ClCG05G026950 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.6e-28 129.0 76 81.6
Gorai.004G120800 Gossypium raimondii HOM05D005138 ORTHO05D006318 2.9e-27 125.6 75 80.0
COL.COLO4_20706 Corchorus olitorius HOM05D005138 ORTHO05D006318 1.9e-26 122.9 71 81.7
Gohir.A10G188200 Gossypium hirsutum HOM05D005138 ORTHO05D006318 2.5e-26 122.5 75 78.7
Rhsim09G0131900 Rhododendron simsii HOM05D005138 ORTHO05D006318 3.6e-25 118.6 72 77.8
Gohir.D03G123000 Gossypium hirsutum HOM05D005138 ORTHO05D006318 6.1e-25 117.9 71 80.3
Lj2A602G38 Lonicera japonica HOM05D005138 ORTHO05D006318 7.9e-25 117.5 71 74.6
Lalb_Chr19g0132971 Lupinus albus HOM05D005138 ORTHO05D006318 1.8e-24 116.3 74 77.0
ClCG00G004230 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.6e-23 112.5 60 83.3
ClCG05G026940 Citrullus lanatus HOM05D005138 ORTHO05D006318 2.6e-23 112.5 60 83.3
Nn7g36804 Nelumbo nucifera HOM05D005138 ORTHO05D006318 2.8e-22 109.0 63 79.4
MD07G1046900 Malus domestica HOM05D005138 ORTHO05D006318 5.3e-21 104.8 61 78.7
BcaC01g04057 Brassica carinata HOM05D005138 ORTHO05D006318 1.5e-20 103.2 70 67.1
SMO364G0517 Selaginella moellendorffii HOM05D005138 ORTHO05D006318 1.5e-20 103.2 127 40.2
PGSC0003DMG401025557 Solanum tuberosum HOM05D005138 ORTHO05D006318 2.0e-20 102.8 72 68.1
COL.COLO4_20705 Corchorus olitorius HOM05D005138 ORTHO05D006318 3.4e-20 102.1 60 75.0
RcHm_v2.0_Chr1g0325941 Rosa chinensis HOM05D005138 ORTHO05D006318 4.5e-20 101.7 69 72.5
CAN.G575.4 Capsicum annuum HOM05D005138 ORTHO05D006318 7.7e-20 100.9 77 63.6
Atru.chr10.1194 Acer truncatum HOM05D005527 ORTHO05D006480 3.9e-16 88.6 77 59.7
Lalb_Chr19g0132981 Lupinus albus HOM05D005138 ORTHO05D006318 5.2e-16 88.2 62 69.4
AUR62042115 Chenopodium quinoa HOM05D005138 ORTHO05D006318 2.0e-15 86.3 53 77.4
Oeu064133.1 Olea europaea HOM05D005138 ORTHO05D006318 9.7e-15 84.0 56 71.4
VMungo0464G2031 Vigna mungo HOM05D005138 ORTHO05D011906 4.8e-14 81.6 58 72.4
SEGI_36145 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.8e-13 79.7 74 50.0
MCO10G366 Micromonas commoda HOM05D005138 ORTHO05D006318 3.1e-13 79.0 116 37.9
Cre12.g555250 Chlamydomonas reinhardtii HOM05D005138 ORTHO05D006318 1.0e-08 63.9 112 28.6
SEGI_02182 Sequoiadendron giganteum HOM05D005138 ORTHO05D006318 1.4e-08 63.5 74 37.8


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