Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010849 Carpinus fangiana HOM05D000677 ORTHO05D043709 3.1e-46 188.0 86 100.0
Cfa010854 Carpinus fangiana HOM05D000677 ORTHO05D000727 9.8e-16 86.7 40 95.0
Cfa010851 Carpinus fangiana HOM05D000677 ORTHO05D000727 1.3e-15 86.3 40 95.0
Cfa010852 Carpinus fangiana HOM05D000677 ORTHO05D000727 1.8e-14 82.4 44 77.3
FvH4_7g02230 Fragaria vesca HOM05D000677 ORTHO05D000727 7.0e-14 80.5 58 60.3
FAN01G1016 Fragaria x ananassa HOM05D000677 ORTHO05D000727 7.0e-14 80.5 58 60.3
FAN06G4392 Fragaria x ananassa HOM05D000677 ORTHO05D000727 7.0e-14 80.5 58 60.3
Lalb_Chr03g0024231 Lupinus albus HOM05D000677 ORTHO05D000727 7.0e-14 80.5 58 63.8
Lj3g0019403 Lotus japonicus HOM05D000677 ORTHO05D000727 9.1e-14 80.1 37 91.9
CSS0009873 Camellia sinensis var. sinensis HOM05D000677 ORTHO05D000727 1.2e-13 79.7 43 79.1
FAN03G0987 Fragaria x ananassa HOM05D000677 ORTHO05D000727 1.6e-13 79.3 58 58.6
Atru.chr11.2501 Acer truncatum HOM05D000677 ORTHO05D000727 2.0e-13 79.0 42 78.6
Glyma.12G012000 Glycine max HOM05D000677 ORTHO05D000727 2.0e-13 79.0 37 89.2
Hma1.2p1_0184F.1_g081110 Hydrangea macrophylla HOM05D000677 ORTHO05D000727 2.7e-13 78.6 37 89.2
Cfa010856 Carpinus fangiana HOM05D000677 ORTHO05D000727 3.5e-13 78.2 45 71.1
Dinv32056 Davidia involucrata HOM05D000677 ORTHO05D000727 3.5e-13 78.2 58 58.6
Psat0s3281g0040 Pisum sativum HOM05D000677 ORTHO05D000727 3.5e-13 78.2 37 86.5
RcHm_v2.0_Chr1g0319551 Rosa chinensis HOM05D000677 ORTHO05D000727 4.5e-13 77.8 43 74.4
Glyma.09G225000 Glycine max HOM05D000677 ORTHO05D000727 5.9e-13 77.4 37 86.5
Duzib106G0580 Durio zibethinus HOM05D000677 ORTHO05D000727 7.7e-13 77.0 58 56.9
Phvul.011G014800 Phaseolus vulgaris HOM05D000677 ORTHO05D000727 7.7e-13 77.0 37 86.5
Ciclev10033461m.g Citrus clementina HOM05D000677 ORTHO05D000727 1.0e-12 76.6 37 86.5
COL.COLO4_25836 Corchorus olitorius HOM05D000677 ORTHO05D000727 1.0e-12 76.6 58 58.6
MD07G1028400 Malus domestica HOM05D000677 ORTHO05D000727 1.0e-12 76.6 58 58.6
Manes.04G164100 Manihot esculenta HOM05D000677 ORTHO05D000727 1.0e-12 76.6 54 61.1
QL04p013403 Quercus lobata HOM05D000677 ORTHO05D000727 1.0e-12 76.6 43 72.1
VMungo1127G2073 Vigna mungo HOM05D000677 ORTHO05D000727 1.0e-12 76.6 37 86.5
Eucgr.J01197 Eucalyptus grandis HOM05D000677 ORTHO05D000727 1.3e-12 76.3 43 72.1
Ca_19648_v3 Cicer arietinum L. HOM05D000677 ORTHO05D000727 2.3e-12 75.5 37 81.1
TPR.G21748 Trifolium pratense HOM05D000677 ORTHO05D000727 2.3e-12 75.5 37 83.8
Zm00001eb369470 Zea mays HOM05D000677 ORTHO05D000727 2.3e-12 75.5 43 72.1
Eucgr.J01195 Eucalyptus grandis HOM05D000677 ORTHO05D000727 3.8e-12 74.7 58 55.2
Gohir.A13G013000 Gossypium hirsutum HOM05D000677 ORTHO05D000727 3.8e-12 74.7 43 72.1
Lsat_1_v5_gn_1_98020 Lactuca sativa HOM05D000677 ORTHO05D000727 3.8e-12 74.7 37 86.5
Medtr1g052505 Medicago truncatula HOM05D000677 ORTHO05D000727 3.8e-12 74.7 43 69.8
Psat2g118160 Pisum sativum HOM05D000677 ORTHO05D000727 3.8e-12 74.7 37 81.1
Potri.003G202200 Populus trichocarpa HOM05D000677 ORTHO05D000727 3.8e-12 74.7 37 83.8
GSVIVG01000848001 Vitis vinifera HOM05D000677 ORTHO05D000727 5.0e-12 74.3 38 81.6
MELO3C033753.2 Cucumis melo HOM05D000677 ORTHO05D000727 6.6e-12 73.9 38 78.9
Duzib128G0211 Durio zibethinus HOM05D000677 ORTHO05D000727 6.6e-12 73.9 37 81.1
Nn7g36482 Nelumbo nucifera HOM05D000677 ORTHO05D000727 6.6e-12 73.9 37 81.1
Thecc.10G005500 Theobroma cacao HOM05D000677 ORTHO05D000727 6.6e-12 73.9 58 55.2
CiPaw.13G010300 Carya illinoinensis HOM05D000677 ORTHO05D000727 8.6e-12 73.6 37 83.8
Gohir.D13G014002 Gossypium hirsutum HOM05D000677 ORTHO05D000727 8.6e-12 73.6 58 53.4
Prupe.2G028600 Prunus persica HOM05D000677 ORTHO05D000727 8.6e-12 73.6 58 56.9
TWI38G2282 Tripterygium wilfordii HOM05D000677 ORTHO05D000727 8.6e-12 73.6 37 81.1
COL.COLO4_25840 Corchorus olitorius HOM05D000677 ORTHO05D000727 1.1e-11 73.2 35 82.9
Eucgr.J01199 Eucalyptus grandis HOM05D000677 ORTHO05D000727 1.1e-11 73.2 35 82.9
Gorai.013G015200 Gossypium raimondii HOM05D000677 ORTHO05D000727 1.1e-11 73.2 43 69.8
Medtr4g037670 Medicago truncatula HOM05D000677 ORTHO05D000727 1.1e-11 73.2 37 78.4
Potri.001G023400 Populus trichocarpa HOM05D000677 ORTHO05D000727 1.1e-11 73.2 37 81.1
QL04p012780 Quercus lobata HOM05D000677 ORTHO05D000727 1.1e-11 73.2 43 69.8
CiPaw.13G010400 Carya illinoinensis HOM05D000677 ORTHO05D000727 1.5e-11 72.8 39 76.9
Gohir.D13G014202 Gossypium hirsutum HOM05D000677 ORTHO05D000727 1.5e-11 72.8 60 46.7
Gorai.013G015400 Gossypium raimondii HOM05D000677 ORTHO05D000727 1.5e-11 72.8 60 46.7
HanXRQChr01g0016411 Helianthus annuus HOM05D000677 ORTHO05D000727 1.5e-11 72.8 37 81.1
HanXRQChr13g0403851 Helianthus annuus HOM05D000677 ORTHO05D000727 1.5e-11 72.8 37 83.8
Peaxi162Scf00309g00120 Petunia axillaris HOM05D000677 ORTHO05D000727 1.5e-11 72.8 42 76.2
Sabra01G0017700 Salix brachista HOM05D000677 ORTHO05D000727 1.5e-11 72.8 37 81.1
Cfa010853 Carpinus fangiana HOM05D000677 ORTHO05D000727 1.9e-11 72.4 43 72.1
Os01g0800500 Oryza sativa ssp. japonica HOM05D000677 ORTHO05D000727 1.9e-11 72.4 37 75.7
PGR044G1200 Punica granatum HOM05D000677 ORTHO05D000727 1.9e-11 72.4 36 77.8
VMungo1127G2079 Vigna mungo HOM05D000677 ORTHO05D000727 1.9e-11 72.4 37 81.1
Phvul.011G014900 Phaseolus vulgaris HOM05D000677 ORTHO05D000727 2.5e-11 72.0 37 83.8
Zm00001eb369460 Zea mays HOM05D000677 ORTHO05D000727 2.5e-11 72.0 35 80.0
Atru.chr11.2500 Acer truncatum HOM05D000677 ORTHO05D000727 3.3e-11 71.6 37 81.1
Aqoxy2G00293 Aquilegia oxysepala HOM05D000677 ORTHO05D000727 3.3e-11 71.6 35 80.0
CAN.G179.42 Capsicum annuum HOM05D000677 ORTHO05D000727 3.3e-11 71.6 37 81.1
DCAR_003235 Daucus carota HOM05D000063 ORTHO05D003101 3.3e-11 71.6 33 90.9
ECA248G1819 Erigeron canadensis HOM05D000006 ORTHO05D000091 3.3e-11 71.6 37 83.8
MD07G1029200 Malus domestica HOM05D000677 ORTHO05D043709 3.3e-11 71.6 40 72.5
MD07G1029700 Malus domestica HOM05D000677 ORTHO05D000727 3.3e-11 71.6 58 56.9
Eucgr.J01196 Eucalyptus grandis HOM05D000677 ORTHO05D000727 4.2e-11 71.2 37 75.7
Lj7A579T38 Lonicera japonica HOM05D000677 ORTHO05D000727 4.2e-11 71.2 36 80.6
QL04p012819 Quercus lobata HOM05D000677 ORTHO05D000727 4.2e-11 71.2 35 80.0
QL04p013364 Quercus lobata HOM05D000677 ORTHO05D000727 4.2e-11 71.2 35 80.0
ClCG01G007620 Citrullus lanatus HOM05D000677 ORTHO05D000727 5.5e-11 70.9 50 58.0
Thecc.10G005600 Theobroma cacao HOM05D000677 ORTHO05D000727 5.5e-11 70.9 35 80.0
unitig_62.g23944 Utricularia gibba HOM05D000677 ORTHO05D000727 5.5e-11 70.9 36 77.8
ATR0721G131 Amborella trichopoda HOM05D000677 ORTHO05D000727 7.2e-11 70.5 37 81.1
QL04p013338 Quercus lobata HOM05D000677 ORTHO05D000727 7.2e-11 70.5 37 81.1
TAR369G0724 Trochodendron aralioides HOM05D000677 ORTHO05D000727 7.2e-11 70.5 40 75.0
Cc02_g29480 Coffea canephora HOM05D000677 ORTHO05D000727 1.2e-10 69.7 37 78.4
Atru.chr11.2471 Acer truncatum HOM05D000677 ORTHO05D000727 1.6e-10 69.3 37 78.4
Sopen01g030340 Solanum pennellii HOM05D000677 ORTHO05D000727 1.6e-10 69.3 37 81.1
MELO3C033949.2 Cucumis melo HOM05D000677 ORTHO05D000727 2.1e-10 68.9 55 58.2
Hund15709 Selenicereus undatus HOM05D000677 ORTHO05D000727 2.1e-10 68.9 38 71.1
PGSC0003DMG400017958 Solanum tuberosum HOM05D000677 ORTHO05D000727 2.1e-10 68.9 37 78.4
HPP92_016886 Vanilla planifolia HOM05D000677 ORTHO05D000727 2.1e-10 68.9 33 84.8
CsaV3_5G024620 Cucumis sativus L. HOM05D000677 ORTHO05D000727 2.8e-10 68.6 57 54.4
CsaV3_5G024650 Cucumis sativus L. HOM05D000677 ORTHO05D000727 2.8e-10 68.6 37 75.7
Sed0026976 Sechium edule HOM05D000677 ORTHO05D000727 2.8e-10 68.6 37 73.0
AagrBONN_evm.TU.Sc2ySwM_228.1702 Anthoceros agrestis HOM05D000677 ORTHO05D000727 3.6e-10 68.2 40 65.0
Migut.D00794 Erythranthe guttata HOM05D000677 ORTHO05D000727 4.7e-10 67.8 35 80.0
Oeu006104.1 Olea europaea HOM05D000677 ORTHO05D000727 4.7e-10 67.8 37 78.4
PSO339G0815 Papaver somniferum HOM05D000677 ORTHO05D000727 6.1e-10 67.4 37 75.7
PSO513G0192 Papaver somniferum HOM05D000677 ORTHO05D000727 6.1e-10 67.4 37 75.7
SEGI_40315 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 6.1e-10 67.4 69 44.9
TWI38G1249 Tripterygium wilfordii HOM05D000677 ORTHO05D000727 6.1e-10 67.4 33 81.8
HPP92_016885 Vanilla planifolia HOM05D000677 ORTHO05D000727 6.1e-10 67.4 35 74.3
Solyc01g068380.3 Solanum lycopersicum HOM05D000677 ORTHO05D000727 8.0e-10 67.0 37 78.4
CANSAT80G2597 Cannabis sativa HOM05D000677 ORTHO05D000727 1.0e-09 66.6 35 77.1
AUR62037237 Chenopodium quinoa HOM05D000677 ORTHO05D000727 1.0e-09 66.6 58 53.4
Cc02_g29510 Coffea canephora HOM05D000677 ORTHO05D000727 1.0e-09 66.6 36 77.8
TWI38G0884 Tripterygium wilfordii HOM05D000677 ORTHO05D000727 1.4e-09 66.2 33 81.8
Cpa.g.sc197.8 Carica papaya HOM05D000677 ORTHO05D000727 3.0e-09 65.1 40 65.0
EL10Ac2g02866 Beta vulgaris HOM05D000677 ORTHO05D000727 4.0e-09 64.7 38 68.4
SEGI_15600 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 4.0e-09 64.7 38 68.4
AUR62026815 Chenopodium quinoa HOM05D000677 ORTHO05D000727 5.2e-09 64.3 38 68.4
Sc10g0004250 Simmondsia chinensis HOM05D000677 ORTHO05D000727 5.2e-09 64.3 38 63.2
Mapoly0014s0160 Marchantia polymorpha HOM05D000677 ORTHO05D000727 8.9e-09 63.5 34 73.5
CANSAT80G0361 Cannabis sativa HOM05D000677 ORTHO05D000727 2.6e-08 62.0 35 71.4
Pp3c15_6210 Physcomitrium patens HOM05D000677 ORTHO05D000727 3.4e-08 61.6 40 60.0
SEGI_03563 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 1.7e-07 59.3 33 72.7
TWI38G1132 Tripterygium wilfordii HOM05D000677 ORTHO05D000727 1.7e-07 59.3 38 60.5
SMO356G0136 Selaginella moellendorffii HOM05D000677 ORTHO05D000727 2.2e-07 58.9 36 63.9
SEGI_19673 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 4.9e-07 57.8 32 71.9
SMO356G0026 Selaginella moellendorffii HOM05D000677 ORTHO05D000727 8.3e-07 57.0 33 66.7
SEGI_10223 Sequoiadendron giganteum HOM05D000677 ORTHO05D000727 1.4e-06 56.2 33 60.6


User provided reference genes

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