Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010767 Carpinus fangiana HOM05D007629 ORTHO05D009511 1.2e-59 233.0 123 100.0
Haze_03204 Corylus avellana HOM05D007629 ORTHO05D009511 2.9e-45 185.3 123 84.6
Glyma.13G202600 Glycine max HOM05D007629 ORTHO05D009511 2.7e-27 125.6 117 63.2
ECA234G2567 Erigeron canadensis HOM05D007629 ORTHO05D009511 5.1e-26 121.3 111 63.1
CsaV3_3G032130 Cucumis sativus L. HOM05D007629 ORTHO05D009511 8.7e-26 120.6 121 53.7
ClCG10G012340 Citrullus lanatus HOM05D007629 ORTHO05D009511 1.9e-25 119.4 114 56.1
Oeu010795.1 Olea europaea HOM05D007629 ORTHO05D009511 1.9e-25 119.4 117 59.0
Dinv43443 Davidia involucrata HOM05D007629 ORTHO05D009511 4.3e-25 118.2 122 63.1
Sed0004901 Sechium edule HOM05D007629 ORTHO05D009511 7.4e-25 117.5 114 55.3
Lj3g0012705 Lotus japonicus HOM05D007629 ORTHO05D009511 1.3e-24 116.7 118 62.7
TAR369G1117 Trochodendron aralioides HOM05D007629 ORTHO05D009511 6.3e-24 114.4 115 59.1
Eucgr.G03381 Eucalyptus grandis HOM05D007629 ORTHO05D009511 1.4e-23 113.2 121 57.9
arahy.Tifrunner.gnm1.ann1.4N8Z75 Arachis hypogaea HOM05D007629 ORTHO05D009511 2.4e-23 112.5 120 57.5
MELO3C023979.2 Cucumis melo HOM05D007629 ORTHO05D009511 5.3e-23 111.3 121 51.2
arahy.Tifrunner.gnm1.ann1.CVX1Z9 Arachis hypogaea HOM05D007629 ORTHO05D009511 6.9e-23 110.9 120 57.5
Lalb_Chr01g0008051 Lupinus albus HOM05D007629 ORTHO05D009511 1.5e-22 109.8 119 57.1
Glyma.12G237100 Glycine max HOM05D007629 ORTHO05D009511 2.0e-22 109.4 121 56.2
Atru.chr11.2627 Acer truncatum HOM05D007629 ORTHO05D009511 4.5e-22 108.2 85 71.8
Ca_23857_v3 Cicer arietinum L. HOM05D007629 ORTHO05D009511 7.6e-22 107.5 118 60.2
Lsat_1_v5_gn_4_31601 Lactuca sativa HOM05D007629 ORTHO05D009511 1.0e-21 107.1 123 52.8
Sabra16G0163500 Salix brachista HOM05D007629 ORTHO05D009511 1.7e-21 106.3 109 56.9
TPR.G1849 Trifolium pratense HOM05D007629 ORTHO05D009511 1.7e-21 106.3 115 61.7
Medtr8g037205 Medicago truncatula HOM05D007629 ORTHO05D009511 2.2e-21 105.9 110 62.7
CiPaw.13G005200 Carya illinoinensis HOM05D007629 ORTHO05D009511 2.9e-21 105.5 119 60.5
Duzib138G1419 Durio zibethinus HOM05D007629 ORTHO05D009511 8.5e-21 104.0 122 56.6
Nitab4.5_0001186g0030 Nicotiana tabacum HOM05D007629 ORTHO05D009511 3.2e-20 102.1 134 53.0
Phvul.011G211600 Phaseolus vulgaris HOM05D007629 ORTHO05D009511 3.2e-20 102.1 110 55.5
CANSAT80G2723 Cannabis sativa HOM05D007629 ORTHO05D009511 4.2e-20 101.7 112 58.0
Manes.07G006300 Manihot esculenta HOM05D007629 ORTHO05D009511 5.5e-20 101.3 83 69.9
Ciclev10033658m.g Citrus clementina HOM05D007629 ORTHO05D009511 7.2e-20 100.9 78 66.7
QL04p006494 Quercus lobata HOM05D007629 ORTHO05D009511 7.2e-20 100.9 112 55.4
Atru.chr11.2625 Acer truncatum HOM05D007629 ORTHO05D009511 9.3e-20 100.5 87 67.8
FAN01G0239 Fragaria x ananassa HOM05D007629 ORTHO05D009511 9.3e-20 100.5 137 54.7
Nn7g36205 Nelumbo nucifera HOM05D007629 ORTHO05D009511 9.3e-20 100.5 77 70.1
RcHm_v2.0_Chr1g0316061 Rosa chinensis HOM05D007629 ORTHO05D009511 1.2e-19 100.1 134 56.0
SGA_v2.0_scaffold24G10674 Striga asiatica HOM05D007629 ORTHO05D009511 1.2e-19 100.1 112 55.4
FAN03G3264 Fragaria x ananassa HOM05D007629 ORTHO05D009511 2.7e-19 99.0 137 54.0
Nitab4.5_0026617g0010 Nicotiana tabacum HOM05D007629 ORTHO05D009511 2.7e-19 99.0 128 53.9
Psat4g149000 Pisum sativum HOM05D007629 ORTHO05D009511 2.7e-19 99.0 123 54.5
Migut.N01599 Erythranthe guttata HOM05D007629 ORTHO05D009511 6.1e-19 97.8 115 53.0
FvH4_7g01080 Fragaria vesca HOM05D007629 ORTHO05D009511 6.1e-19 97.8 136 52.2
FAN06G2853 Fragaria x ananassa HOM05D007629 ORTHO05D009511 2.3e-18 95.9 136 51.5
PGSC0003DMG400006802 Solanum tuberosum HOM05D007629 ORTHO05D009511 2.3e-18 95.9 119 53.8
VMungo1127G0677 Vigna mungo HOM05D007629 ORTHO05D009511 3.0e-18 95.5 120 48.3
HanXRQChr17g0562961 Helianthus annuus HOM05D007629 ORTHO05D009511 3.9e-18 95.1 113 55.8
Thecc.01G410700 Theobroma cacao HOM05D007629 ORTHO05D009511 3.9e-18 95.1 77 64.9
GSVIVG01032094001 Vitis vinifera HOM05D007629 ORTHO05D009511 8.8e-18 94.0 80 68.8
EL10Ac2g04331 Beta vulgaris HOM05D007629 ORTHO05D009511 1.5e-17 93.2 118 54.2
DCAR_029669 Daucus carota HOM05D007629 ORTHO05D009511 1.9e-17 92.8 123 52.0
TWI53G0918 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 1.9e-17 92.8 71 71.8
Potri.001G266500 Populus trichocarpa HOM05D007629 ORTHO05D009511 5.7e-17 91.3 114 51.8
COL.COLO4_04855 Corchorus olitorius HOM05D000074 ORTHO05D000220 1.7e-16 89.7 119 50.4
Solyc01g087180.4 Solanum lycopersicum HOM05D007629 ORTHO05D009511 6.3e-16 87.8 145 46.2
Cc02_g27970 Coffea canephora HOM05D007629 ORTHO05D009511 1.8e-15 86.3 118 52.5
TWI53G0001 Tripterygium wilfordii HOM05D007629 ORTHO05D009511 6.9e-15 84.3 108 50.0
CAN.G1560.3 Capsicum annuum HOM05D007629 ORTHO05D009511 1.2e-14 83.6 139 48.2
Actinidia21549 Actinidia chinensis HOM05D007629 ORTHO05D009511 1.5e-14 83.2 108 50.9
Rhsim01G0129300 Rhododendron simsii HOM05D007629 ORTHO05D009511 3.4e-14 82.0 112 52.7
Prupe.2G013500 Prunus persica HOM05D007629 ORTHO05D009511 4.5e-14 81.6 107 54.2
Aqoxy2G00135 Aquilegia oxysepala HOM05D007629 ORTHO05D009511 1.3e-13 80.1 89 57.3
Cpa.g.c29394.2 Carica papaya HOM05D007629 ORTHO05D009511 1.7e-13 79.7 71 60.6
Sc11g0009160 Simmondsia chinensis HOM05D007629 ORTHO05D009511 5.0e-13 78.2 83 54.2
Sed0017474 Sechium edule HOM05D007629 ORTHO05D009511 8.5e-13 77.4 119 40.3
MD07G1011000 Malus domestica HOM05D007629 ORTHO05D009511 1.1e-12 77.0 158 41.8
PGR031G1171 Punica granatum HOM05D007629 ORTHO05D009511 1.4e-12 76.6 76 59.2
Actinidia20665 Actinidia chinensis HOM05D007629 ORTHO05D009511 2.5e-12 75.9 95 51.6
Gohir.D08G063600 Gossypium hirsutum HOM05D007629 ORTHO05D009511 3.2e-12 75.5 75 58.7
Gorai.004G065600 Gossypium raimondii HOM05D007629 ORTHO05D009511 3.2e-12 75.5 75 58.7
Peaxi162Scf00953g00011 Petunia axillaris HOM05D007629 ORTHO05D009511 4.2e-12 75.1 81 55.6
Gohir.A08G053900 Gossypium hirsutum HOM05D007629 ORTHO05D009511 5.5e-12 74.7 77 57.1
CSS0036847 Camellia sinensis var. sinensis HOM05D007629 ORTHO05D009511 7.9e-11 70.9 72 63.9
MBI01_g26744_MAGBIO Magnolia biondii HOM05D007629 ORTHO05D009511 8.8e-10 67.4 75 54.7
Hund16629 Selenicereus undatus HOM05D007629 ORTHO05D009511 9.7e-09 63.9 110 43.6
ATR0332G023 Amborella trichopoda HOM05D007629 ORTHO05D009511 2.2e-08 62.8 116 44.0
CDE10G1066 Ceratophyllum demersum HOM05D007629 ORTHO05D009511 3.7e-08 62.0 113 39.8
Aa31sc522G10 Aethionema arabicum HOM05D007629 ORTHO05D009511 4.8e-08 61.6 102 45.1
PSO764G0291 Papaver somniferum HOM05D007629 ORTHO05D009511 8.2e-08 60.8 115 40.9
PSO832G4302 Papaver somniferum HOM05D007629 ORTHO05D009511 8.2e-08 60.8 115 40.9
Sopen01g034240 Solanum pennellii HOM05D007629 ORTHO05D009511 8.2e-08 60.8 48 66.7
AT1G07985 Arabidopsis thaliana HOM05D007629 ORTHO05D009511 1.4e-07 60.1 80 53.8
AL1G18320 Arabidopsis lyrata HOM05D007629 ORTHO05D009511 4.1e-07 58.5 80 52.5
BolC5t29361H Brassica oleracea HOM05D000280 ORTHO05D000632 5.3e-07 58.2 75 54.7
Ah.10g038830 Amaranthus hybridus HOM05D007629 ORTHO05D009511 1.5e-06 56.6 92 46.7
BcaC05g24715 Brassica carinata HOM05D007629 ORTHO05D009511 2.0e-06 56.2 74 52.7
BcaB02g06696 Brassica carinata HOM05D007629 ORTHO05D009511 4.5e-06 55.1 75 53.3
BraA06t23712Z Brassica rapa HOM05D000280 ORTHO05D000632 4.5e-06 55.1 76 51.3


User provided reference genes

Program Settings