Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010631 Carpinus fangiana HOM05D006548 ORTHO05D008064 7.6e-78 293.9 163 100.0
Haze_03573 Corylus avellana HOM05D006548 ORTHO05D008064 9.7e-73 276.9 165 94.5
CiPaw.13G058400 Carya illinoinensis HOM05D006548 ORTHO05D008064 4.8e-64 248.1 163 82.8
PGR083G0463 Punica granatum HOM05D006548 ORTHO05D008064 5.0e-61 238.0 160 76.9
Rhsim13G0053600 Rhododendron simsii HOM05D006548 ORTHO05D008064 1.9e-60 236.1 167 76.0
Cpa.g.sc8.57 Carica papaya HOM05D004405 ORTHO05D005613 2.1e-59 232.6 168 76.8
Sabra02G0182000 Salix brachista HOM05D006548 ORTHO05D008064 2.1e-59 232.6 163 76.7
Potri.002G239000 Populus trichocarpa HOM05D006548 ORTHO05D008064 3.6e-59 231.9 161 77.0
Manes.13G055300 Manihot esculenta HOM05D006548 ORTHO05D008064 1.0e-58 230.3 164 75.6
TAR362G1118 Trochodendron aralioides HOM05D006548 ORTHO05D008064 1.4e-58 229.9 164 76.2
COL.COLO4_06931 Corchorus olitorius HOM05D006548 ORTHO05D008064 2.3e-58 229.2 160 74.4
Potri.014G177100 Populus trichocarpa HOM05D006548 ORTHO05D008064 2.3e-58 229.2 164 75.6
Nn3g18599 Nelumbo nucifera HOM05D006548 ORTHO05D008064 3.9e-58 228.4 165 76.4
Sabra14G0135300 Salix brachista HOM05D006548 ORTHO05D008064 5.1e-58 228.0 163 74.8
Aqoxy2G04054 Aquilegia oxysepala HOM05D006548 ORTHO05D008064 6.7e-58 227.6 157 73.2
RcHm_v2.0_Chr6g0282621 Rosa chinensis HOM05D006548 ORTHO05D008064 2.6e-57 225.7 163 73.6
ClCG09G007890 Citrullus lanatus HOM05D006548 ORTHO05D008064 3.3e-57 225.3 160 73.8
CSS0021481 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 5.7e-57 224.6 164 73.8
Ciclev10017030m.g Citrus clementina HOM05D006548 ORTHO05D008064 7.4e-57 224.2 157 72.0
Manes.12G059600 Manihot esculenta HOM05D006548 ORTHO05D008064 7.4e-57 224.2 164 73.2
Prupe.8G188900 Prunus persica HOM05D006548 ORTHO05D008064 9.7e-57 223.8 163 73.6
THA.LOC104819003 Tarenaya hassleriana HOM05D006548 ORTHO05D008064 9.7e-57 223.8 163 72.4
Gorai.007G160300 Gossypium raimondii HOM05D006548 ORTHO05D008064 1.3e-56 223.4 161 73.3
Gohir.A11G143200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.7e-56 223.0 161 73.3
Gohir.D07G202600 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.7e-56 223.0 161 72.0
Hma1.2p1_0161F.1_g071510 Hydrangea macrophylla HOM05D006548 ORTHO05D008064 1.7e-56 223.0 164 76.8
Oeu051515.1 Olea europaea HOM05D006548 ORTHO05D008064 2.2e-56 222.6 164 72.0
Lj2P1115T39 Lonicera japonica HOM05D006548 ORTHO05D008064 3.7e-56 221.9 164 73.2
Sed0004612 Sechium edule HOM05D006548 ORTHO05D008064 3.7e-56 221.9 163 73.0
Gohir.D11G149500 Gossypium hirsutum HOM05D006548 ORTHO05D008064 4.8e-56 221.5 161 72.0
Gorai.001G228000 Gossypium raimondii HOM05D006548 ORTHO05D008064 4.8e-56 221.5 161 71.4
CSS0032607 Camellia sinensis var. sinensis HOM05D006548 ORTHO05D008064 6.3e-56 221.1 164 79.3
Cc01_g16030 Coffea canephora HOM05D006548 ORTHO05D008064 8.2e-56 220.7 164 73.2
MD10G1150500 Malus domestica HOM05D006548 ORTHO05D008064 8.2e-56 220.7 163 76.7
Peaxi162Scf00372g00041 Petunia axillaris HOM05D006548 ORTHO05D008064 8.2e-56 220.7 157 70.7
Atru.chr6.3534 Acer truncatum HOM05D006548 ORTHO05D008064 1.1e-55 220.3 165 73.3
Nn4g25121 Nelumbo nucifera HOM05D006548 ORTHO05D008064 1.1e-55 220.3 164 72.0
Nitab4.5_0002311g0090 Nicotiana tabacum HOM05D006548 ORTHO05D008064 1.1e-55 220.3 159 71.1
vmacro02826 Vaccinium macrocarpon HOM05D006548 ORTHO05D008064 1.4e-55 219.9 167 72.5
Nitab4.5_0011925g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 2.4e-55 219.2 164 70.1
PSO675G8742 Papaver somniferum HOM05D006548 ORTHO05D008064 2.4e-55 219.2 157 74.5
Nitab4.5_0001348g0010 Nicotiana tabacum HOM05D006548 ORTHO05D008064 3.1e-55 218.8 164 70.1
Nitab4.5_0007144g0040 Nicotiana tabacum HOM05D006548 ORTHO05D008064 3.1e-55 218.8 164 70.1
PSO017G5831 Papaver somniferum HOM05D006548 ORTHO05D008064 3.1e-55 218.8 157 74.5
arahy.Tifrunner.gnm1.ann1.C7NXRU Arachis hypogaea HOM05D006548 ORTHO05D008064 5.3e-55 218.0 159 77.4
Sopen06g034400 Solanum pennellii HOM05D006548 ORTHO05D008064 7.0e-55 217.6 159 71.1
Lalb_Chr03g0040981 Lupinus albus HOM05D006548 ORTHO05D008064 9.1e-55 217.2 155 77.4
CAN.G874.34 Capsicum annuum HOM05D006548 ORTHO05D008064 1.2e-54 216.9 160 70.0
MBI08_g14954_MAGBIO Magnolia biondii HOM05D006659 ORTHO05D008064 1.2e-54 216.9 159 71.7
PGSC0003DMG400027686 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.2e-54 216.9 159 70.4
arahy.Tifrunner.gnm1.ann1.I0E60T Arachis hypogaea HOM05D006548 ORTHO05D008064 1.5e-54 216.5 162 75.9
Lalb_Chr01g0021941 Lupinus albus HOM05D006548 ORTHO05D008064 1.5e-54 216.5 158 76.6
PGSC0003DMG400020639 Solanum tuberosum HOM05D006548 ORTHO05D008064 1.5e-54 216.5 121 86.0
MSTRG.17967 Avicennia marina HOM05D006548 ORTHO05D008064 2.0e-54 216.1 164 70.1
FAN27G0042 Fragaria x ananassa HOM05D006548 ORTHO05D008064 2.0e-54 216.1 163 70.6
FAN27G0390 Fragaria x ananassa HOM05D006548 ORTHO05D008064 2.0e-54 216.1 163 70.6
HanXRQChr08g0231851 Helianthus annuus HOM05D006548 ORTHO05D008064 2.6e-54 215.7 159 71.7
Solyc06g007630.1 Solanum lycopersicum HOM05D006548 ORTHO05D008064 2.6e-54 215.7 121 86.0
Sopen06g002520 Solanum pennellii HOM05D006548 ORTHO05D008064 2.6e-54 215.7 121 86.0
DCAR_030798 Daucus carota HOM05D006548 ORTHO05D008064 3.5e-54 215.3 157 69.4
Duzib138G0849 Durio zibethinus HOM05D006548 ORTHO05D008064 3.5e-54 215.3 161 70.8
AL3G18800 Arabidopsis lyrata HOM05D006548 ORTHO05D008064 4.5e-54 214.9 160 69.4
AT3G07480 Arabidopsis thaliana HOM05D006548 ORTHO05D008064 4.5e-54 214.9 160 69.4
Sp3g06390 Schrenkiella parvula HOM05D006548 ORTHO05D008064 4.5e-54 214.9 163 69.9
FvH4_2g17650 Fragaria vesca HOM05D006548 ORTHO05D008064 5.9e-54 214.5 163 69.9
FAN24G3284 Fragaria x ananassa HOM05D006548 ORTHO05D008064 5.9e-54 214.5 163 69.9
BcaC05g29539 Brassica carinata HOM05D006548 ORTHO05D008064 1.3e-53 213.4 161 68.3
Carub.0003s0703 Capsella rubella HOM05D006548 ORTHO05D008064 1.3e-53 213.4 160 70.0
VMungo1383G2587 Vigna mungo HOM05D006548 ORTHO05D008064 1.3e-53 213.4 161 72.0
Ah.11g050830 Amaranthus hybridus HOM05D006548 ORTHO05D008064 1.7e-53 213.0 163 69.9
Psat3g151760 Pisum sativum HOM05D006548 ORTHO05D008064 2.2e-53 212.6 157 70.1
CARHR082130 Cardamine hirsuta HOM05D006548 ORTHO05D008064 5.0e-53 211.5 162 67.9
Phvul.008G137800 Phaseolus vulgaris HOM05D006548 ORTHO05D008064 5.0e-53 211.5 161 72.7
C05p59840 Brassica napus HOM05D006548 ORTHO05D008064 6.5e-53 211.1 156 68.6
BolC5t34638H Brassica oleracea HOM05D006548 ORTHO05D008064 8.5e-53 210.7 156 68.6
A05p40730 Brassica napus HOM05D006548 ORTHO05D008064 1.1e-52 210.3 161 68.9
BraA05t22804Z Brassica rapa HOM05D006548 ORTHO05D008064 1.1e-52 210.3 161 68.9
Aa31LG5G18040 Aethionema arabicum HOM05D006548 ORTHO05D008064 1.9e-52 209.5 161 67.7
CANSAT01G2941 Cannabis sativa HOM05D006548 ORTHO05D008064 1.9e-52 209.5 165 73.3
MELO3C015717.2 Cucumis melo HOM05D006548 ORTHO05D008064 1.9e-52 209.5 163 65.0
QL09p047049 Quercus lobata HOM05D006548 ORTHO05D008064 1.9e-52 209.5 163 68.7
Duzib211G0675 Durio zibethinus HOM05D006548 ORTHO05D008064 2.5e-52 209.1 161 68.3
Glyma.08G343100 Glycine max HOM05D006548 ORTHO05D008064 3.2e-52 208.8 161 68.9
HPP92_002744 Vanilla planifolia HOM05D006548 ORTHO05D008064 3.2e-52 208.8 121 82.6
SGA_v2.0_scaffold95G28706 Striga asiatica HOM05D006548 ORTHO05D008064 4.2e-52 208.4 158 69.0
TPR.G26806 Trifolium pratense HOM05D006548 ORTHO05D008064 5.5e-52 208.0 162 69.1
Thhalv10021677m.g Eutrema salsugineum HOM05D006548 ORTHO05D008064 7.2e-52 207.6 160 68.8
unitig_61.g26345 Utricularia gibba HOM05D006548 ORTHO05D008064 7.2e-52 207.6 157 66.9
Migut.N00670 Erythranthe guttata HOM05D006548 ORTHO05D008064 9.4e-52 207.2 164 67.7
Ca_07442_v3 Cicer arietinum L. HOM05D006548 ORTHO05D008064 1.2e-51 206.8 154 67.5
Lj1g0008534 Lotus japonicus HOM05D006548 ORTHO05D008064 6.1e-51 204.5 158 70.9
AUR62028648 Chenopodium quinoa HOM05D006548 ORTHO05D008064 8.0e-51 204.1 164 65.9
Os09g0514600 Oryza sativa ssp. japonica HOM05D006548 ORTHO05D008064 1.0e-50 203.8 121 81.8
TWI75G1339 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 1.0e-50 203.8 158 69.0
BcaB03g14699 Brassica carinata HOM05D006548 ORTHO05D008064 1.8e-50 203.0 160 66.9
Glyma.18G153900 Glycine max HOM05D006548 ORTHO05D008064 3.0e-50 202.2 162 66.7
Zm00001eb102720 Zea mays HOM05D006548 ORTHO05D008064 3.0e-50 202.2 121 80.2
Medtr7g051230 Medicago truncatula HOM05D006548 ORTHO05D008064 8.8e-50 200.7 119 80.7
TWI36G0698 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 4.4e-49 198.4 158 67.1
ECA247G0922 Erigeron canadensis HOM05D006548 ORTHO05D008064 9.7e-49 197.2 151 68.2
TWI18G0731 Tripterygium wilfordii HOM05D006548 ORTHO05D008064 9.7e-49 197.2 158 67.7
ATR0824G029 Amborella trichopoda HOM05D006548 ORTHO05D008064 2.8e-48 195.7 157 65.0
Thecc.01G209700 Theobroma cacao HOM05D006548 ORTHO05D008064 1.1e-47 193.7 145 72.4
GSVIVG01003797001 Vitis vinifera HOM05D006548 ORTHO05D008064 9.1e-47 190.7 118 72.0
Zm00001eb318350 Zea mays HOM05D006548 ORTHO05D008064 9.1e-47 190.7 119 78.2
Lsat_1_v5_gn_9_16480 Lactuca sativa HOM05D006548 ORTHO05D008064 7.2e-44 181.0 169 62.1
Sc05g0001680 Simmondsia chinensis HOM05D006548 ORTHO05D008064 1.4e-42 176.8 146 65.1
CsaV3_7G027180 Cucumis sativus L. HOM05D006548 ORTHO05D008064 1.8e-42 176.4 147 62.6
EL10Ac5g10597 Beta vulgaris HOM05D006548 ORTHO05D008064 2.8e-40 169.1 149 67.1
Gohir.A07G196200 Gossypium hirsutum HOM05D006548 ORTHO05D008064 1.5e-36 156.8 91 82.4
Pp3c2_31000 Physcomitrium patens HOM05D006548 ORTHO05D008064 1.2e-33 147.1 117 57.3
Ciclev10013747m.g Citrus clementina HOM05D006548 ORTHO05D008064 1.8e-31 139.8 82 81.7
CDE12G0850 Ceratophyllum demersum HOM05D006548 ORTHO05D008064 9.1e-31 137.5 77 77.9
AagrBONN_evm.TU.Sc2ySwM_362.984 Anthoceros agrestis HOM05D006548 ORTHO05D008064 1.0e-29 134.0 118 52.5
Mapoly0085s0036 Marchantia polymorpha HOM05D006548 ORTHO05D008064 1.8e-26 123.2 119 51.3
C03p67920 Brassica napus HOM05D006548 ORTHO05D008064 5.7e-25 118.2 90 65.6
BcaC05g29538 Brassica carinata HOM05D006548 ORTHO05D008064 1.3e-24 117.1 104 60.6
BcaC01g02172 Brassica carinata HOM05D006548 ORTHO05D008064 3.7e-24 115.5 90 64.4
Actinidia30005 Actinidia chinensis HOM05D006548 ORTHO05D008064 9.8e-17 90.9 166 44.6
SEGI_16405 Sequoiadendron giganteum HOM05D002489 ORTHO05D002653 1.7e-16 90.1 100 56.0
CBR_g34314 Chara braunii HOM05D006548 ORTHO05D008064 9.2e-15 84.3 125 36.8
BolC3t19017H Brassica oleracea HOM05D006548 ORTHO05D008064 2.0e-14 83.2 49 75.5
BraA03t13759Z Brassica rapa HOM05D006548 ORTHO05D008064 4.6e-14 82.0 49 77.6
SMO119G0279 Selaginella moellendorffii HOM05D006548 ORTHO05D008064 3.0e-13 79.3 118 36.4
Mapoly0113s0043 Marchantia polymorpha HOM05D006548 ORTHO05D008064 5.8e-09 65.1 156 29.5


User provided reference genes

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