Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010589 Carpinus fangiana HOM05D000083 ORTHO05D000196 3.8e-33 144.8 108 100.0
Cfa010588 Carpinus fangiana HOM05D000083 ORTHO05D000196 1.4e-30 136.3 108 93.5
Cfa010586 Carpinus fangiana HOM05D000083 ORTHO05D000196 1.5e-29 132.9 108 93.5
Cfa010585 Carpinus fangiana HOM05D000083 ORTHO05D000196 6.9e-27 124.0 72 86.1
Cfa010583 Carpinus fangiana HOM05D000083 ORTHO05D000196 5.9e-26 120.9 75 78.7
Haze_03519 Corylus avellana HOM05D000083 ORTHO05D000196 2.5e-24 115.5 73 72.6
Haze_03527 Corylus avellana HOM05D000083 ORTHO05D000196 3.2e-24 115.2 75 74.7
Haze_03530 Corylus avellana HOM05D000083 ORTHO05D000196 3.2e-24 115.2 75 74.7
Haze_03515 Corylus avellana HOM05D000083 ORTHO05D000196 4.2e-24 114.8 70 77.1
Haze_07954 Corylus avellana HOM05D025838 ORTHO05D165632 1.1e-21 106.7 75 69.3
Haze_24324 Corylus avellana HOM05D000083 ORTHO05D000196 8.8e-14 80.5 69 58.0
Haze_02186 Corylus avellana HOM05D000083 ORTHO05D000196 2.6e-13 79.0 70 57.1
Cfa007268 Carpinus fangiana HOM05D000083 ORTHO05D000196 2.2e-12 75.9 51 68.6
Cfa005615 Carpinus fangiana HOM05D000083 ORTHO05D000196 4.1e-11 71.6 75 49.3
QL02p099954 Quercus lobata HOM05D000083 ORTHO05D000196 2.2e-09 65.9 75 48.0
QL02p099948 Quercus lobata HOM05D000083 ORTHO05D000196 5.0e-09 64.7 75 46.7
Cfa010481 Carpinus fangiana HOM05D000083 ORTHO05D000196 4.2e-08 61.6 40 62.5
Cfa005208 Carpinus fangiana HOM05D000180 ORTHO05D000099 5.5e-08 61.2 45 64.4
Duzib138G1440 Durio zibethinus HOM05D000083 ORTHO05D000196 5.5e-08 61.2 41 68.3
Phvul.002G186600 Phaseolus vulgaris HOM05D000083 ORTHO05D000196 5.5e-08 61.2 57 49.1
Gorai.011G106000 Gossypium raimondii HOM05D000083 ORTHO05D000196 9.4e-08 60.5 44 56.8
PSO675G7703 Papaver somniferum HOM05D000083 ORTHO05D000196 9.4e-08 60.5 32 78.1
Atru.chr1.3141 Acer truncatum HOM05D000083 ORTHO05D000196 1.6e-07 59.7 44 61.4
Haze_10251 Corylus avellana HOM05D000083 ORTHO05D000196 1.6e-07 59.7 32 75.0
Duzib264G0222 Durio zibethinus HOM05D000083 ORTHO05D000196 1.6e-07 59.7 46 58.7
PSO170G0947 Papaver somniferum HOM05D000083 ORTHO05D000196 1.6e-07 59.7 55 52.7
PGR004G2645 Punica granatum HOM05D000083 ORTHO05D000196 2.1e-07 59.3 56 53.6
arahy.Tifrunner.gnm1.ann1.SNPS34 Arachis hypogaea HOM05D000083 ORTHO05D000196 2.7e-07 58.9 34 70.6
PSO210G6607 Papaver somniferum HOM05D000083 ORTHO05D000196 2.7e-07 58.9 55 54.5
arahy.Tifrunner.gnm1.ann1.4D3EC8 Arachis hypogaea HOM05D000083 ORTHO05D000196 3.6e-07 58.5 32 75.0
MSTRG.23741 Avicennia marina HOM05D000083 ORTHO05D000196 3.6e-07 58.5 32 71.9
ClCG01G016870 Citrullus lanatus HOM05D000083 ORTHO05D000196 4.7e-07 58.2 43 53.5
Duzib133G0441 Durio zibethinus HOM05D000083 ORTHO05D000196 4.7e-07 58.2 46 58.7
Migut.H00424 Erythranthe guttata HOM05D000083 ORTHO05D000196 4.7e-07 58.2 32 75.0
TAR381G1032 Trochodendron aralioides HOM05D000083 ORTHO05D000196 4.7e-07 58.2 57 47.4
Thecc.07G129800 Theobroma cacao HOM05D000083 ORTHO05D000196 6.1e-07 57.8 45 60.0
TAR625G0625 Trochodendron aralioides HOM05D000083 ORTHO05D000196 6.1e-07 57.8 55 47.3
arahy.Tifrunner.gnm1.ann1.M6G4Q4 Arachis hypogaea HOM05D000083 ORTHO05D000196 8.0e-07 57.4 32 71.9
Duzib133G1428 Durio zibethinus HOM05D000083 ORTHO05D000196 8.0e-07 57.4 33 69.7
Gohir.D10G096700 Gossypium hirsutum HOM05D000083 ORTHO05D000196 8.0e-07 57.4 44 54.5
Lalb_Chr00c02g0404021 Lupinus albus HOM05D000083 ORTHO05D000196 8.0e-07 57.4 32 71.9
TWI73G0219 Tripterygium wilfordii HOM05D000083 ORTHO05D000196 8.0e-07 57.4 32 71.9
BcaNung02523 Brassica carinata HOM05D000083 ORTHO05D000196 1.0e-06 57.0 32 71.9
A01p01810 Brassica napus HOM05D000083 ORTHO05D000196 1.0e-06 57.0 32 71.9
C01p01950 Brassica napus HOM05D000083 ORTHO05D000196 1.0e-06 57.0 32 71.9
BolC1t00189H Brassica oleracea HOM05D000083 ORTHO05D000196 1.0e-06 57.0 32 71.9
BraA01t00171Z Brassica rapa HOM05D000083 ORTHO05D000196 1.0e-06 57.0 32 71.9
Duzib138G1107 Durio zibethinus HOM05D000083 ORTHO05D000196 1.0e-06 57.0 33 69.7
Thhalv10027234m.g Eutrema salsugineum HOM05D000083 ORTHO05D000196 1.0e-06 57.0 47 53.2
Nitab4.5_0003298g0060 Nicotiana tabacum HOM05D000083 ORTHO05D000196 1.0e-06 57.0 43 53.5
MELO3C020859.2 Cucumis melo HOM05D000083 ORTHO05D000196 1.4e-06 56.6 33 66.7
HanXRQChr14g0449081 Helianthus annuus HOM05D000083 ORTHO05D000196 1.4e-06 56.6 32 68.8
Lj2g0020617 Lotus japonicus HOM05D000083 ORTHO05D000196 1.4e-06 56.6 34 61.8
Thecc.06G015000 Theobroma cacao HOM05D000083 ORTHO05D000196 1.4e-06 56.6 33 69.7
Aqoxy5G01211 Aquilegia oxysepala HOM05D000083 ORTHO05D000196 1.8e-06 56.2 55 50.9
Lj5P308T23 Lonicera japonica HOM05D000083 ORTHO05D000196 1.8e-06 56.2 32 75.0
Solyc02g064980.1 Solanum lycopersicum HOM05D000083 ORTHO05D000196 1.8e-06 56.2 37 59.5
Thecc.08G174800 Theobroma cacao HOM05D000083 ORTHO05D000196 1.8e-06 56.2 33 69.7
TPR.G7117 Trifolium pratense HOM05D000083 ORTHO05D000196 1.8e-06 56.2 40 55.0
HPP92_021555 Vanilla planifolia HOM05D000083 ORTHO05D000196 1.8e-06 56.2 51 51.0
Atru.chr5.2724 Acer truncatum HOM05D000083 ORTHO05D000196 2.3e-06 55.8 33 66.7
Aqoxy6G01298 Aquilegia oxysepala HOM05D000083 ORTHO05D000196 2.3e-06 55.8 40 57.5
Lj5C309T9 Lonicera japonica HOM05D000083 ORTHO05D000196 2.3e-06 55.8 32 71.9
Phvul.002G018100 Phaseolus vulgaris HOM05D000083 ORTHO05D000196 2.3e-06 55.8 57 45.6
Thecc.04G108600 Theobroma cacao HOM05D000083 ORTHO05D000196 2.3e-06 55.8 33 66.7
CDE02G0662 Ceratophyllum demersum HOM05D000083 ORTHO05D000196 3.0e-06 55.5 46 52.2
CDE08G0853 Ceratophyllum demersum HOM05D000083 ORTHO05D000196 3.0e-06 55.5 36 61.1
HanXRQChr15g0490411 Helianthus annuus HOM05D000083 ORTHO05D000196 3.0e-06 55.5 32 71.9
Lj5C309T10 Lonicera japonica HOM05D000083 ORTHO05D000196 3.0e-06 55.5 32 71.9
Rhsim08G0099800 Rhododendron simsii HOM05D000083 ORTHO05D000196 3.0e-06 55.5 43 55.8
Sopen02g015110 Solanum pennellii HOM05D000083 ORTHO05D000196 3.0e-06 55.5 32 65.6
GSVIVG01022117001 Vitis vinifera HOM05D000083 ORTHO05D000196 3.0e-06 55.5 40 57.5
A01p24210 Brassica napus HOM05D000083 ORTHO05D000196 4.0e-06 55.1 32 68.8
Duzib192G0826 Durio zibethinus HOM05D000083 ORTHO05D000196 4.0e-06 55.1 32 68.8
Glyma.17G173000 Glycine max HOM05D000083 ORTHO05D000196 4.0e-06 55.1 36 58.3
Gohir.D11G199800 Gossypium hirsutum HOM05D000083 ORTHO05D000196 4.0e-06 55.1 36 58.3
PSO541G2633 Papaver somniferum HOM05D000083 ORTHO05D000196 4.0e-06 55.1 32 75.0
Potri.007G044800 Populus trichocarpa HOM05D000083 ORTHO05D000196 4.0e-06 55.1 32 65.6
Thecc.01G057700 Theobroma cacao HOM05D000083 ORTHO05D000196 4.0e-06 55.1 49 51.0
HPP92_024517 Vanilla planifolia HOM05D000083 ORTHO05D000196 4.0e-06 55.1 41 53.7
HPP92_024589 Vanilla planifolia HOM05D000083 ORTHO05D030684 4.0e-06 55.1 41 53.7
CsaV3_2G016490 Cucumis sativus L. HOM05D000083 ORTHO05D000196 5.2e-06 54.7 32 65.6
DCAR_010885 Daucus carota HOM05D000083 ORTHO05D000196 5.2e-06 54.7 32 68.8
DCAR_025740 Daucus carota HOM05D000083 ORTHO05D000196 5.2e-06 54.7 52 51.9
Duzib138G1371 Durio zibethinus HOM05D000083 ORTHO05D000196 5.2e-06 54.7 38 57.9
Lsat_1_v5_gn_3_89220 Lactuca sativa HOM05D000083 ORTHO05D000196 5.2e-06 54.7 36 61.1
Medtr5g017110 Medicago truncatula HOM05D000083 ORTHO05D000196 5.2e-06 54.7 32 62.5
Nitab4.5_0000604g0140 Nicotiana tabacum HOM05D000083 ORTHO05D000196 5.2e-06 54.7 32 65.6
Nitab4.5_0002263g0060 Nicotiana tabacum HOM05D000083 ORTHO05D000196 5.2e-06 54.7 32 65.6
Oeu062446.1 Olea europaea HOM05D000083 ORTHO05D000196 5.2e-06 54.7 32 68.8
Psat4g086600 Pisum sativum HOM05D000083 ORTHO05D000196 5.2e-06 54.7 50 50.0
PGSC0003DMG400025472 Solanum tuberosum HOM05D000083 ORTHO05D000196 5.2e-06 54.7 32 65.6
TPR.G19076 Trifolium pratense HOM05D000083 ORTHO05D000196 5.2e-06 54.7 32 65.6
Atru.chr3.4174 Acer truncatum HOM05D000083 ORTHO05D000196 6.7e-06 54.3 41 51.2
Atru.chr3.4182 Acer truncatum HOM05D000083 ORTHO05D000196 6.7e-06 54.3 41 51.2
BcaB01g00627 Brassica carinata HOM05D000083 ORTHO05D000196 6.7e-06 54.3 32 68.8
Cfa004658 Carpinus fangiana HOM05D000083 ORTHO05D000196 6.7e-06 54.3 32 65.6
CiPaw.06G124400 Carya illinoinensis HOM05D000083 ORTHO05D000196 6.7e-06 54.3 84 36.9
Glyma.05G094400 Glycine max HOM05D000083 ORTHO05D000196 6.7e-06 54.3 39 53.8
Gohir.A10G091500 Gossypium hirsutum HOM05D000083 ORTHO05D000196 6.7e-06 54.3 44 52.3
Gorai.007G213900 Gossypium raimondii HOM05D000083 ORTHO05D000196 6.7e-06 54.3 33 63.6
Lsat_1_v5_gn_2_84800 Lactuca sativa HOM05D000083 ORTHO05D000196 6.7e-06 54.3 32 65.6
MBI07_g42666_MAGBIO Magnolia biondii HOM05D000083 ORTHO05D000196 6.7e-06 54.3 32 68.8
Medtr0154s0020 Medicago truncatula HOM05D000083 ORTHO05D000196 6.7e-06 54.3 32 65.6
Medtr0189s0010 Medicago truncatula HOM05D000083 ORTHO05D000196 6.7e-06 54.3 32 65.6
Nitab4.5_0005375g0040 Nicotiana tabacum HOM05D000083 ORTHO05D000196 6.7e-06 54.3 36 55.6
Prupe.7G132100 Prunus persica HOM05D000083 ORTHO05D000196 6.7e-06 54.3 33 66.7
Sabra07G0039700 Salix brachista HOM05D000083 ORTHO05D000196 6.7e-06 54.3 32 65.6
Sp5g11870 Schrenkiella parvula HOM05D000083 ORTHO05D000196 6.7e-06 54.3 32 68.8
BcaNung05426 Brassica carinata HOM05D000083 ORTHO05D000196 8.8e-06 53.9 32 65.6
CSS0024866 Camellia sinensis var. sinensis HOM05D000083 ORTHO05D000196 8.8e-06 53.9 33 63.6
CAN.G370.55 Capsicum annuum HOM05D000083 ORTHO05D000196 8.8e-06 53.9 32 65.6
Ca_24762_v3 Cicer arietinum L. HOM05D000083 ORTHO05D000196 8.8e-06 53.9 44 50.0
ECA232G4789 Erigeron canadensis HOM05D000083 ORTHO05D000196 8.8e-06 53.9 32 65.6
Gohir.A12G072100 Gossypium hirsutum HOM05D000083 ORTHO05D000196 8.8e-06 53.9 47 51.1
Lj5A307T30 Lonicera japonica HOM05D000083 ORTHO05D000196 8.8e-06 53.9 32 68.8
Lj5C307T1 Lonicera japonica HOM05D000083 ORTHO05D000196 8.8e-06 53.9 32 68.8
Lj5C307T3 Lonicera japonica HOM05D000083 ORTHO05D000196 8.8e-06 53.9 32 68.8
Nitab4.5_0003298g0070 Nicotiana tabacum HOM05D000083 ORTHO05D000196 8.8e-06 53.9 32 65.6
Nitab4.5_0003519g0060 Nicotiana tabacum HOM05D000083 ORTHO05D000196 8.8e-06 53.9 32 65.6
Peaxi162Scf00450g00028 Petunia axillaris HOM05D000083 ORTHO05D000196 8.8e-06 53.9 44 50.0
Sp7g34810 Schrenkiella parvula HOM05D000083 ORTHO05D000196 8.8e-06 53.9 32 65.6
SGA_v2.0_scaffold25G10856 Striga asiatica HOM05D000083 ORTHO05D000196 8.8e-06 53.9 32 68.8
THA.LOC104807587 Tarenaya hassleriana HOM05D000083 ORTHO05D000196 8.8e-06 53.9 36 61.1
unitig_736.g22668 Utricularia gibba HOM05D000083 ORTHO05D000196 8.8e-06 53.9 54 44.4


User provided reference genes

Program Settings