Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010524 Carpinus fangiana HOM05D006018 ORTHO05D007545 5.5e-65 250.8 121 100.0
Haze_03464 Corylus avellana HOM05D006018 ORTHO05D007545 3.2e-49 198.4 146 71.9
CiPaw.13G043500 Carya illinoinensis HOM05D006018 ORTHO05D007545 1.2e-46 189.9 148 65.5
QL04p047894 Quercus lobata HOM05D006018 ORTHO05D007545 3.1e-44 181.8 148 63.5
Hma1.2p1_0381F.1_g139990 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 7.0e-44 180.6 115 74.8
Potri.010G242600 Populus trichocarpa HOM05D006018 ORTHO05D007545 2.5e-41 172.2 148 62.2
Thecc.10G116100 Theobroma cacao HOM05D006018 ORTHO05D007545 3.2e-41 171.8 149 59.1
Cpa.g.sc54.21 Carica papaya HOM05D006018 ORTHO05D007545 5.5e-41 171.0 149 59.7
COL.COLO4_07822 Corchorus olitorius HOM05D006018 ORTHO05D007545 7.2e-41 170.6 149 60.4
Gohir.D04G017100 Gossypium hirsutum HOM05D006018 ORTHO05D007545 1.2e-40 169.9 149 58.4
Gorai.012G019800 Gossypium raimondii HOM05D006018 ORTHO05D007545 1.2e-40 169.9 149 58.4
MD07G1062200 Malus domestica HOM05D006018 ORTHO05D007545 1.2e-40 169.9 149 59.1
arahy.Tifrunner.gnm1.ann1.Z7U9ST Arachis hypogaea HOM05D006018 ORTHO05D007545 1.6e-40 169.5 152 59.9
PGR044G0766 Punica granatum HOM05D006018 ORTHO05D007545 2.1e-40 169.1 149 56.4
Gohir.A05G398800 Gossypium hirsutum HOM05D006018 ORTHO05D007545 4.7e-40 167.9 149 58.4
MD02G1258600 Malus domestica HOM05D006018 ORTHO05D007545 4.7e-40 167.9 149 58.4
RcHm_v2.0_Chr1g0325281 Rosa chinensis HOM05D006018 ORTHO05D007545 4.7e-40 167.9 149 58.4
Duzib106G1265 Durio zibethinus HOM05D006018 ORTHO05D007545 8.0e-40 167.2 149 57.7
Sabra10G0189600 Salix brachista HOM05D006018 ORTHO05D007545 1.4e-39 166.4 151 60.3
FAN01G2803 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.8e-39 166.0 149 57.7
Prupe.2G072000 Prunus persica HOM05D006018 ORTHO05D007545 3.0e-39 165.2 149 57.0
RcHm_v2.0_Chr1g0325311 Rosa chinensis HOM05D006018 ORTHO05D007545 3.0e-39 165.2 153 57.5
Dinv08587 Davidia involucrata HOM05D006018 ORTHO05D007545 5.2e-39 164.5 149 56.4
arahy.Tifrunner.gnm1.ann1.Z71440 Arachis hypogaea HOM05D006018 ORTHO05D007545 6.8e-39 164.1 149 59.1
FAN03G1346 Fragaria x ananassa HOM05D006018 ORTHO05D007545 6.8e-39 164.1 148 57.4
PGSC0003DMG401001978 Solanum tuberosum HOM05D006018 ORTHO05D007545 6.8e-39 164.1 149 57.7
TPR.G19796 Trifolium pratense HOM05D006018 ORTHO05D007545 6.8e-39 164.1 149 58.4
PSO384G0865 Papaver somniferum HOM05D006018 ORTHO05D007545 8.8e-39 163.7 149 54.4
Hma1.2p1_0381F.1_g139980 Hydrangea macrophylla HOM05D006018 ORTHO05D007545 1.2e-38 163.3 148 56.1
arahy.Tifrunner.gnm1.ann1.V4FSHN Arachis hypogaea HOM05D006018 ORTHO05D007545 1.5e-38 162.9 149 59.7
Ciclev10016037m.g Citrus clementina HOM05D006018 ORTHO05D007545 1.5e-38 162.9 149 55.7
Lj6g0008960 Lotus japonicus HOM05D006018 ORTHO05D007545 1.5e-38 162.9 149 58.4
arahy.Tifrunner.gnm1.ann1.QNY1I5 Arachis hypogaea HOM05D006018 ORTHO05D007545 2.0e-38 162.5 149 59.1
Ca_12272_v3 Cicer arietinum L. HOM05D006018 ORTHO05D007545 2.0e-38 162.5 149 58.4
FvH4_7g03231 Fragaria vesca HOM05D006018 ORTHO05D007545 2.0e-38 162.5 149 56.4
CSS0019594 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 3.4e-38 161.8 149 57.7
CSS0043702 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 3.4e-38 161.8 149 57.7
PSO339G6589 Papaver somniferum HOM05D006018 ORTHO05D007545 3.4e-38 161.8 149 53.7
Sopen11g002450 Solanum pennellii HOM05D006018 ORTHO05D007545 3.4e-38 161.8 149 57.7
Eucgr.J00283 Eucalyptus grandis HOM05D006018 ORTHO05D007545 4.4e-38 161.4 148 56.1
Manes.10G059900 Manihot esculenta HOM05D006018 ORTHO05D007545 4.4e-38 161.4 149 53.7
Lalb_Chr19g0128951 Lupinus albus HOM05D006018 ORTHO05D007545 5.7e-38 161.0 149 57.0
CANSAT56G4342 Cannabis sativa HOM05D006018 ORTHO05D007545 7.5e-38 160.6 149 55.0
Psat6g049120 Pisum sativum HOM05D006018 ORTHO05D007545 7.5e-38 160.6 149 57.7
Solyc11g006550.3 Solanum lycopersicum HOM05D006018 ORTHO05D007545 9.8e-38 160.2 149 57.0
SGA_v2.0_scaffold2G01315 Striga asiatica HOM05D006018 ORTHO05D007545 9.8e-38 160.2 149 55.7
vmacro10321 Vaccinium macrocarpon HOM05D006018 ORTHO05D007545 9.8e-38 160.2 149 57.7
THA.LOC104804947 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 1.7e-37 159.5 149 55.7
THA.LOC104801755 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 2.2e-37 159.1 149 55.0
TWI38G2380 Tripterygium wilfordii HOM05D006018 ORTHO05D007545 2.8e-37 158.7 149 55.7
Actinidia34731 Actinidia chinensis HOM05D006018 ORTHO05D007545 3.7e-37 158.3 149 57.0
CAN.G143.25 Capsicum annuum HOM05D006018 ORTHO05D007545 3.7e-37 158.3 149 56.4
Nitab4.5_0007799g0030 Nicotiana tabacum HOM05D006018 ORTHO05D007545 3.7e-37 158.3 149 55.0
HPP92_027461 Vanilla planifolia HOM05D006018 ORTHO05D007545 3.7e-37 158.3 115 63.5
Nn6g34699 Nelumbo nucifera HOM05D006018 ORTHO05D007545 4.9e-37 157.9 149 53.0
Glyma.20G072400 Glycine max HOM05D006018 ORTHO05D007545 6.3e-37 157.5 149 56.4
Nn2g14297 Nelumbo nucifera HOM05D006018 ORTHO05D007545 6.3e-37 157.5 143 54.5
Phvul.007G234300 Phaseolus vulgaris HOM05D006018 ORTHO05D007545 8.3e-37 157.1 149 54.4
Aqoxy1G00667 Aquilegia oxysepala HOM05D006018 ORTHO05D007545 1.1e-36 156.8 148 54.7
FAN10G2047 Fragaria x ananassa HOM05D006018 ORTHO05D007545 1.4e-36 156.4 149 55.0
Medtr1g048370 Medicago truncatula HOM05D006018 ORTHO05D007545 1.4e-36 156.4 149 56.4
Migut.F00847 Erythranthe guttata HOM05D006018 ORTHO05D007545 2.4e-36 155.6 149 54.4
VMungo0720G2948 Vigna mungo HOM05D006018 ORTHO05D007545 2.4e-36 155.6 149 54.4
CSS0004952 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 3.1e-36 155.2 149 56.4
THA.LOC104823771 Tarenaya hassleriana HOM05D006018 ORTHO05D007545 3.1e-36 155.2 149 53.7
Aa31LG2G1810 Aethionema arabicum HOM05D006018 ORTHO05D007545 4.1e-36 154.8 149 53.0
Glyma.10G121524 Glycine max HOM05D006018 ORTHO05D007545 5.4e-36 154.5 149 54.4
MELO3C012335.2 Cucumis melo HOM05D006018 ORTHO05D007545 7.0e-36 154.1 149 53.7
GSVIVG01034634001 Vitis vinifera HOM05D006018 ORTHO05D007545 7.0e-36 154.1 149 53.0
CSS0009212 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 1.2e-35 153.3 157 54.8
AT2G26230 Arabidopsis thaliana HOM05D006018 ORTHO05D007545 1.6e-35 152.9 149 53.0
A07p08930 Brassica napus HOM05D006018 ORTHO05D007545 1.6e-35 152.9 149 51.7
C07p13770 Brassica napus HOM05D006018 ORTHO05D007545 1.6e-35 152.9 149 51.7
BolC7t41872H Brassica oleracea HOM05D006018 ORTHO05D007545 1.6e-35 152.9 149 51.7
BraA07t28684Z Brassica rapa HOM05D006018 ORTHO05D007545 1.6e-35 152.9 149 51.7
HanXRQChr02g0053551 Helianthus annuus HOM05D006018 ORTHO05D007545 1.6e-35 152.9 149 55.0
Sp3g21150 Schrenkiella parvula HOM05D006018 ORTHO05D007545 1.6e-35 152.9 149 52.3
SpUn0047_0030 Schrenkiella parvula HOM05D006018 ORTHO05D007545 1.6e-35 152.9 149 52.3
Peaxi162Scf00725g00522 Petunia axillaris HOM05D006018 ORTHO05D007545 2.0e-35 152.5 149 55.0
SalBow3G1532 Salvia bowleyana HOM05D006018 ORTHO05D007545 2.0e-35 152.5 150 53.3
BcaC06g35533 Brassica carinata HOM05D006018 ORTHO05D007545 2.7e-35 152.1 149 51.7
ClCG05G021930 Citrullus lanatus HOM05D006018 ORTHO05D007545 2.7e-35 152.1 149 52.3
ECA238G1473 Erigeron canadensis HOM05D006018 ORTHO05D007545 2.7e-35 152.1 149 55.0
CsaV3_5G035210 Cucumis sativus L. HOM05D006018 ORTHO05D007545 3.5e-35 151.8 149 53.0
AL1G64680 Arabidopsis lyrata HOM05D006018 ORTHO05D007545 4.5e-35 151.4 149 53.0
Thhalv10021194m.g Eutrema salsugineum HOM05D006018 ORTHO05D007545 4.5e-35 151.4 149 53.0
Lsat_1_v5_gn_2_105841 Lactuca sativa HOM05D006018 ORTHO05D007545 4.5e-35 151.4 130 60.0
AUR62034490 Chenopodium quinoa HOM05D006018 ORTHO05D007545 5.9e-35 151.0 149 51.0
Cc02_g09390 Coffea canephora HOM05D006018 ORTHO05D007545 5.9e-35 151.0 149 52.3
Sc09g0005130 Simmondsia chinensis HOM05D006018 ORTHO05D007545 5.9e-35 151.0 149 53.7
BcaB06g26497 Brassica carinata HOM05D006018 ORTHO05D007545 1.0e-34 150.2 149 51.0
Ah.06g186820 Amaranthus hybridus HOM05D006018 ORTHO05D007545 1.3e-34 149.8 149 50.3
Carub.0002s0907 Capsella rubella HOM05D006018 ORTHO05D007545 1.3e-34 149.8 149 51.0
CARHR103400 Cardamine hirsuta HOM05D006018 ORTHO05D007545 2.9e-34 148.7 149 51.0
AUR62034169 Chenopodium quinoa HOM05D006018 ORTHO05D007545 2.9e-34 148.7 149 50.3
CSS0030296 Camellia sinensis var. sinensis HOM05D006018 ORTHO05D007545 5.0e-34 147.9 159 53.5
Cfa010526 Carpinus fangiana HOM05D007060 ORTHO05D009087 5.0e-34 147.9 121 66.9
Sed0014972 Sechium edule HOM05D006018 ORTHO05D007545 1.9e-33 146.0 149 50.3
TAR623G0250 Trochodendron aralioides HOM05D006018 ORTHO05D007545 1.9e-33 146.0 149 53.0
Hund06805 Selenicereus undatus HOM05D006018 ORTHO05D007545 1.2e-32 143.3 166 48.8
MSTRG.9035 Avicennia marina HOM05D006018 ORTHO05D007545 2.1e-32 142.5 149 48.3
Nitab4.5_0001781g0180 Nicotiana tabacum HOM05D006018 ORTHO05D007545 2.8e-32 142.1 151 51.7
EL10Ac4g08718 Beta vulgaris HOM05D006018 ORTHO05D007545 8.0e-32 140.6 149 49.0
CDE02G2990 Ceratophyllum demersum HOM05D006018 ORTHO05D007545 3.0e-31 138.7 149 45.0
Rhsim09G0141100 Rhododendron simsii HOM05D006018 ORTHO05D007545 1.5e-30 136.3 110 64.5
Zm00001eb146880 Zea mays HOM05D006018 ORTHO05D007545 1.7e-29 132.9 150 48.0
unitig_899.g14460 Utricularia gibba HOM05D006018 ORTHO05D007545 2.2e-29 132.5 148 47.3
ATR0772G096 Amborella trichopoda HOM05D006018 ORTHO05D007545 4.0e-23 111.7 142 44.4
Atru.chr12.1071 Acer truncatum HOM05D006018 ORTHO05D007545 1.5e-22 109.8 149 40.3
Pp3c14_15560 Physcomitrium patens HOM05D006018 ORTHO05D007545 1.4e-20 103.2 135 45.9
Oeu009248.1 Olea europaea HOM05D006018 ORTHO05D007545 1.6e-19 99.8 60 78.3
SMO134G0227 Selaginella moellendorffii HOM05D006018 ORTHO05D007545 1.0e-18 97.1 137 41.6
FAN01G0562 Fragaria x ananassa HOM05D006018 ORTHO05D007545 3.0e-18 95.5 57 77.2
AagrBONN_evm.TU.Sc2ySwM_344.453 Anthoceros agrestis HOM05D006018 ORTHO05D007545 3.3e-17 92.0 136 41.9
Lj3A923T60 Lonicera japonica HOM05D006018 ORTHO05D007545 1.6e-16 89.7 58 65.5
DCAR_004552 Daucus carota HOM05D006018 ORTHO05D007545 4.0e-15 85.1 58 62.1
Cre12.g504950 Chlamydomonas reinhardtii HOM05D006018 ORTHO05D007545 1.1e-12 77.0 135 34.1
SEGI_29992 Sequoiadendron giganteum HOM05D006018 ORTHO05D007545 2.4e-12 75.9 64 62.5
Mapoly0079s0008 Marchantia polymorpha HOM05D006018 ORTHO05D007545 1.6e-11 73.2 131 33.6
PRCOL_00005817 Prasinoderma coloniale HOM05D006018 ORTHO05D007545 1.6e-11 73.2 159 32.1
MCO08G151 Micromonas commoda HOM05D006018 ORTHO05D007545 3.9e-10 68.6 134 32.1
CBR_g20325 Chara braunii HOM05D006018 ORTHO05D007545 8.9e-07 57.4 32 71.9


User provided reference genes

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