Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010449 Carpinus fangiana HOM05D006789 ORTHO05D008460 3.2e-63 245.0 128 100.0
Haze_03403 Corylus avellana HOM05D006789 ORTHO05D008460 1.7e-56 222.6 122 95.1
Eucgr.J00312 Eucalyptus grandis HOM05D006789 ORTHO05D008460 1.8e-45 186.0 124 76.6
Duzib106G0468 Durio zibethinus HOM05D006789 ORTHO05D008460 1.4e-42 176.4 126 73.8
Gorai.N006500 Gossypium raimondii HOM05D006789 ORTHO05D008460 4.1e-42 174.9 125 72.0
Gohir.D06G178700 Gossypium hirsutum HOM05D006789 ORTHO05D008460 9.0e-42 173.7 125 72.0
Gohir.A06G170900 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.5e-41 172.9 125 71.2
TWI38G1707 Tripterygium wilfordii HOM05D006789 ORTHO05D008460 2.0e-41 172.6 125 72.8
CiPaw.14G037500 Carya illinoinensis HOM05D006789 ORTHO05D008460 5.9e-41 171.0 124 75.0
Dinv24597 Davidia involucrata HOM05D006789 ORTHO05D008460 1.3e-40 169.9 123 76.4
Ciclev10029282m.g Citrus clementina HOM05D006789 ORTHO05D008460 8.5e-40 167.2 123 71.5
arahy.Tifrunner.gnm1.ann1.KMQ9TB Arachis hypogaea HOM05D006789 ORTHO05D008460 1.1e-39 166.8 121 70.2
arahy.Tifrunner.gnm1.ann1.G6AZCI Arachis hypogaea HOM05D006789 ORTHO05D008460 1.4e-39 166.4 121 70.2
TAR633G0905 Trochodendron aralioides HOM05D006789 ORTHO05D008460 1.9e-39 166.0 127 70.9
Thecc.10G129500 Theobroma cacao HOM05D006789 ORTHO05D008460 3.2e-39 165.2 132 67.4
Lalb_Chr15g0079361 Lupinus albus HOM05D006789 ORTHO05D008460 4.2e-39 164.9 121 72.7
Atru.chr3.2036 Acer truncatum HOM05D006789 ORTHO05D008460 7.2e-39 164.1 125 69.6
PGR044G1098 Punica granatum HOM05D006789 ORTHO05D008460 1.2e-38 163.3 128 68.8
Hma1.2p1_0892F.1_g233210 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 2.1e-38 162.5 119 72.3
Glyma.06G315000 Glycine max HOM05D006789 ORTHO05D008460 4.6e-38 161.4 121 71.1
Ca_14025_v3 Cicer arietinum L. HOM05D006789 ORTHO05D008460 1.0e-37 160.2 114 73.7
Glyma.04G129000 Glycine max HOM05D006789 ORTHO05D008460 1.4e-37 159.8 121 71.1
MSTRG.5084 Avicennia marina HOM05D006789 ORTHO05D008460 1.8e-37 159.5 133 64.7
TPR.G25521 Trifolium pratense HOM05D006789 ORTHO05D008460 1.8e-37 159.5 117 72.6
Prupe.2G061000 Prunus persica HOM05D006789 ORTHO05D008460 6.7e-37 157.5 132 65.9
MBI19_g19122_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 2.0e-36 156.0 100 77.0
Medtr3g006790 Medicago truncatula HOM05D006789 ORTHO05D008460 2.0e-36 156.0 117 72.6
Oeu013184.1 Olea europaea HOM05D006789 ORTHO05D008460 2.5e-36 155.6 133 66.9
Potri.008G012100 Populus trichocarpa HOM05D006789 ORTHO05D008460 2.5e-36 155.6 122 68.9
Lj3g0008710 Lotus japonicus HOM05D006789 ORTHO05D008460 3.3e-36 155.2 117 69.2
Phvul.008G161900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 5.7e-36 154.5 117 70.1
SalBow4G0168 Salvia bowleyana HOM05D006789 ORTHO05D008460 9.7e-36 153.7 139 61.9
CANSAT56G4131 Cannabis sativa HOM05D006789 ORTHO05D008460 1.7e-35 152.9 129 62.8
Rhsim07G0072100 Rhododendron simsii HOM05D006789 ORTHO05D008460 2.8e-35 152.1 120 69.2
VMungo0647G0732 Vigna mungo HOM05D006789 ORTHO05D008460 3.7e-35 151.8 117 70.1
MD02G1265000 Malus domestica HOM05D006789 ORTHO05D008460 6.3e-35 151.0 131 64.1
Sc22g0002280 Simmondsia chinensis HOM05D006789 ORTHO05D001455 1.4e-34 149.8 127 64.6
vmacro13786 Vaccinium macrocarpon HOM05D006789 ORTHO05D008460 1.4e-34 149.8 129 65.1
GSVIVG01027313001 Vitis vinifera HOM05D006789 ORTHO05D008460 1.8e-34 149.4 98 75.5
Sabra08G0007400 Salix brachista HOM05D006789 ORTHO05D008460 5.3e-34 147.9 125 65.6
Manes.10G064901 Manihot esculenta HOM05D006789 ORTHO05D008460 9.1e-34 147.1 124 65.3
MBI05_g14944_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 7.7e-33 144.1 100 72.0
Peaxi162Scf00217g00626 Petunia axillaris HOM05D006789 ORTHO05D008460 7.7e-33 144.1 124 64.5
SGA_v2.0_scaffold196G40989 Striga asiatica HOM05D006789 ORTHO05D008460 7.7e-33 144.1 104 70.2
ClCG05G022140 Citrullus lanatus HOM05D006789 ORTHO05D008460 1.0e-32 143.7 121 62.0
MELO3C012309.2 Cucumis melo HOM05D006789 ORTHO05D008460 1.0e-32 143.7 117 63.2
SGA_v2.0_scaffold196G40996 Striga asiatica HOM05D006789 ORTHO05D008460 1.0e-32 143.7 104 70.2
EL10Ac4g08777 Beta vulgaris HOM05D006789 ORTHO05D008460 2.9e-32 142.1 124 62.9
CsaV3_5G034990 Cucumis sativus L. HOM05D006789 ORTHO05D008460 2.9e-32 142.1 117 63.2
Lsat_1_v5_gn_2_28141 Lactuca sativa HOM05D006789 ORTHO05D008460 2.9e-32 142.1 123 62.6
HanXRQChr06g0181521 Helianthus annuus HOM05D006789 ORTHO05D008460 5.0e-32 141.4 124 65.3
DCAR_006626 Daucus carota HOM05D006789 ORTHO05D008460 8.5e-32 140.6 126 60.3
Nn2g14746 Nelumbo nucifera HOM05D006789 ORTHO05D008460 8.5e-32 140.6 94 76.6
Aqoxy1G00021 Aquilegia oxysepala HOM05D006789 ORTHO05D008460 1.9e-31 139.4 97 73.2
Carub.0006s0385 Capsella rubella HOM05D006789 ORTHO05D008460 4.2e-31 138.3 130 60.8
THA.LOC104826955 Tarenaya hassleriana HOM05D006789 ORTHO05D008460 5.5e-31 137.9 133 57.1
BcaC06g32200 Brassica carinata HOM05D006789 ORTHO05D008460 7.2e-31 137.5 130 56.9
A10p31220 Brassica napus HOM05D006789 ORTHO05D008460 1.6e-30 136.3 131 58.8
Sp6g37890 Schrenkiella parvula HOM05D006789 ORTHO05D008460 1.6e-30 136.3 131 55.7
Hund00694 Selenicereus undatus HOM05D006789 ORTHO05D008460 2.1e-30 136.0 124 62.9
BraA10t45166Z Brassica rapa HOM05D006789 ORTHO05D008460 2.7e-30 135.6 131 58.0
BolC9t59933H Brassica oleracea HOM05D006789 ORTHO05D008460 3.6e-30 135.2 131 58.0
C09p71840 Brassica napus HOM05D006789 ORTHO05D008460 4.7e-30 134.8 131 58.0
CDE08G0307 Ceratophyllum demersum HOM05D006789 ORTHO05D008460 6.1e-30 134.4 104 66.3
Thhalv10014633m.g Eutrema salsugineum HOM05D006789 ORTHO05D008460 7.9e-30 134.0 133 55.6
PSO339G2606 Papaver somniferum HOM05D006789 ORTHO05D008460 1.4e-29 133.3 127 59.8
FvH4_7g05010 Fragaria vesca HOM05D006789 ORTHO05D008460 3.0e-29 132.1 122 58.2
FAN01G0280 Fragaria x ananassa HOM05D006789 ORTHO05D008460 8.8e-29 130.6 122 57.4
AUR62014306 Chenopodium quinoa HOM05D006789 ORTHO05D008460 1.1e-28 130.2 100 66.0
AL6G14600 Arabidopsis lyrata HOM05D006789 ORTHO05D008460 1.5e-28 129.8 137 53.3
FAN06G2149 Fragaria x ananassa HOM05D006789 ORTHO05D008460 1.5e-28 129.8 128 55.5
PSO384G0303 Papaver somniferum HOM05D006789 ORTHO05D008460 2.0e-28 129.4 128 57.8
Cfa005731 Carpinus fangiana HOM05D012552 ORTHO05D018926 4.4e-28 128.3 68 92.6
Cfa006091 Carpinus fangiana HOM05D006789 ORTHO05D008460 4.4e-28 128.3 71 93.0
AT5G04910 Arabidopsis thaliana HOM05D006789 ORTHO05D008460 7.4e-28 127.5 137 52.6
Zm00001eb128210 Zea mays HOM05D006789 ORTHO05D008460 1.3e-27 126.7 91 70.3
RcHm_v2.0_Chr1g0331321 Rosa chinensis HOM05D006789 ORTHO05D008460 1.7e-27 126.3 132 53.0
Sed0016797 Sechium edule HOM05D006789 ORTHO05D008460 2.2e-27 125.9 118 58.5
Solyc10g039380.2 Solanum lycopersicum HOM05D006789 ORTHO05D008460 2.2e-27 125.9 118 62.7
FAN03G1759 Fragaria x ananassa HOM05D006789 ORTHO05D008460 2.8e-27 125.6 130 53.8
Sopen10g012840 Solanum pennellii HOM05D006789 ORTHO05D008460 2.8e-27 125.6 112 64.3
Gorai.N006000 Gossypium raimondii HOM05D006789 ORTHO05D008460 1.1e-26 123.6 73 83.6
unitig_26.g9495 Utricularia gibba HOM05D006789 ORTHO05D008460 1.1e-26 123.6 118 58.5
Gorai.010G208300 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.4e-26 122.5 73 82.2
Os01g0265700 Oryza sativa ssp. japonica HOM05D006789 ORTHO05D008460 2.4e-26 122.5 92 65.2
COL.COLO4_28906 Corchorus olitorius HOM05D006789 ORTHO05D008460 4.1e-26 121.7 73 82.2
Aa31LG11G5790 Aethionema arabicum HOM05D006789 ORTHO05D008460 5.3e-26 121.3 135 51.1
ECA238G4254 Erigeron canadensis HOM05D006789 ORTHO05D008460 9.1e-26 120.6 127 54.3
Gohir.A06G170906 Gossypium hirsutum HOM05D006789 ORTHO05D008460 9.1e-26 120.6 73 83.6
CSS0000309 Camellia sinensis var. sinensis HOM05D006789 ORTHO05D008460 1.2e-25 120.2 202 42.1
Actinidia19614 Actinidia chinensis HOM05D000583 ORTHO05D000442 1.3e-24 116.7 88 72.7
Migut.N01877 Erythranthe guttata HOM05D006789 ORTHO05D008460 5.0e-24 114.8 134 54.5
Gohir.D06G178832 Gossypium hirsutum HOM05D006789 ORTHO05D008460 1.6e-22 109.8 66 81.8
Cc02_g32010 Coffea canephora HOM05D006789 ORTHO05D008460 2.0e-20 102.8 75 69.3
Lj7C491T7 Lonicera japonica HOM05D006789 ORTHO05D008460 3.3e-20 102.1 62 83.9
Hma1.2p1_0892F.1_g233220 Hydrangea macrophylla HOM05D006789 ORTHO05D008460 4.4e-20 101.7 66 77.3
Phvul.005G010900 Phaseolus vulgaris HOM05D006789 ORTHO05D008460 5.7e-20 101.3 104 57.7
Sed0010043 Sechium edule HOM05D006789 ORTHO05D008460 7.4e-20 100.9 105 55.2
Pp3c10_8520 Physcomitrium patens HOM05D006789 ORTHO05D008460 1.7e-19 99.8 95 50.5
Cfa010304 Carpinus fangiana HOM05D012552 ORTHO05D018926 8.2e-19 97.4 71 78.9
MBI06_g23363_MAGBIO Magnolia biondii HOM05D006789 ORTHO05D008460 1.4e-18 96.7 68 69.1
Nitab4.5_0004033g0070 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.4e-18 96.7 73 69.9
SMO364G0543 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 2.4e-18 95.9 103 48.5
Nitab4.5_0002156g0010 Nicotiana tabacum HOM05D006789 ORTHO05D008460 1.6e-17 93.2 73 68.5
ATR0068G087 Amborella trichopoda HOM05D006789 ORTHO05D008460 3.5e-17 92.0 62 71.0
Carub.0010s0003 Capsella rubella HOM05D006789 ORTHO05D008460 1.0e-16 90.5 81 56.8
SEGI_32817 Sequoiadendron giganteum HOM05D006789 ORTHO05D008460 1.0e-16 90.5 73 60.3
AUR62034099 Chenopodium quinoa HOM05D006789 ORTHO05D008460 8.5e-16 87.4 61 72.1
Gorai.010G208600 Gossypium raimondii HOM05D006789 ORTHO05D008460 2.1e-14 82.8 59 76.3
Mapoly0023s0087 Marchantia polymorpha HOM05D006789 ORTHO05D008460 6.8e-13 77.8 97 43.3
SHI21242 Sapria himalayana HOM05D006789 ORTHO05D008460 8.8e-13 77.4 62 66.1
SMO353G0288 Selaginella moellendorffii HOM05D006789 ORTHO05D008460 1.5e-12 76.6 95 44.2
Cre16.g683483 Chlamydomonas reinhardtii HOM05D006789 ORTHO05D008460 7.0e-10 67.8 111 37.8
CBR_g54451 Chara braunii HOM05D003248 ORTHO05D000301 1.5e-07 60.1 107 35.5
Psat5g230200 Pisum sativum HOM05D006789 ORTHO05D008460 3.2e-07 58.9 35 85.7


User provided reference genes

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