Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010331 Carpinus fangiana HOM05D007506 ORTHO05D008409 5.1e-35 150.6 79 100.0
Haze_03301 Corylus avellana HOM05D007506 ORTHO05D008409 5.6e-18 94.0 50 98.0
CiPaw.14G033800 Carya illinoinensis HOM05D007506 ORTHO05D008409 1.5e-15 85.9 50 90.0
Sabra08G0010500 Salix brachista HOM05D007506 ORTHO05D008409 7.1e-13 77.0 50 80.0
Potri.008G016801 Populus trichocarpa HOM05D007506 ORTHO05D008409 2.7e-12 75.1 50 78.0
Ciclev10017346m.g Citrus clementina HOM05D007506 ORTHO05D008409 3.9e-11 71.2 50 80.0
Potri.010G240401 Populus trichocarpa HOM05D007506 ORTHO05D008409 1.9e-10 68.9 50 74.0
Atru.chr12.1049 Acer truncatum HOM05D007506 ORTHO05D008409 2.5e-10 68.6 48 75.0
QL04p046828 Quercus lobata HOM05D007506 ORTHO05D008409 7.4e-10 67.0 50 74.0
RcHm_v2.0_Chr1g0331731 Rosa chinensis HOM05D007506 ORTHO05D008409 9.6e-10 66.6 53 69.8
Duzib106G0675 Durio zibethinus HOM05D007506 ORTHO05D008409 2.8e-09 65.1 51 72.5
Manes.10G062500 Manihot esculenta HOM05D007506 ORTHO05D008409 4.8e-09 64.3 50 64.0
Manes.07G086800 Manihot esculenta HOM05D007506 ORTHO05D008409 6.2e-09 63.9 50 72.0
PGR142G2547 Punica granatum HOM05D007506 ORTHO05D008409 1.1e-08 63.2 50 72.0
TWI38G1985 Tripterygium wilfordii HOM05D007506 ORTHO05D008409 1.1e-08 63.2 50 72.0
Sabra10G0188200 Salix brachista HOM05D007506 ORTHO05D008409 1.4e-08 62.8 49 69.4
THA.LOC104816468 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 1.8e-08 62.4 59 55.9
Thecc.10G114000 Theobroma cacao HOM05D007506 ORTHO05D008409 1.8e-08 62.4 51 70.6
THA.LOC109117254 Tarenaya hassleriana HOM05D012863 ORTHO05D008409 3.1e-08 61.6 59 57.6
Cpa.g.sc54.9 Carica papaya HOM05D007506 ORTHO05D008409 1.2e-07 59.7 50 68.0
CANSAT56G4328 Cannabis sativa HOM05D007506 ORTHO05D008409 2.6e-07 58.5 50 62.0
AL6G14410 Arabidopsis lyrata HOM05D012863 ORTHO05D008409 2.2e-06 55.5 45 64.4
CARHR208540 Cardamine hirsuta HOM05D012863 ORTHO05D008409 2.9e-06 55.1 45 62.2
ClCG08G008330 Citrullus lanatus HOM05D007506 ORTHO05D008409 3.8e-06 54.7 50 62.0
Lj5g0016646 Lotus japonicus HOM05D007506 ORTHO05D008409 3.8e-06 54.7 53 69.8
CSS0050385 Camellia sinensis var. sinensis HOM05D007506 ORTHO05D008409 4.9e-06 54.3 53 62.3
MELO3C019903.2 Cucumis melo HOM05D007506 ORTHO05D008409 6.4e-06 53.9 50 62.0
MBI17_g08330_MAGBIO Magnolia biondii HOM05D007506 ORTHO05D008409 6.4e-06 53.9 51 62.7
Carub.0006s0364 Capsella rubella HOM05D012863 ORTHO05D008409 8.4e-06 53.5 45 62.2


User provided reference genes

Program Settings