Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010307 Carpinus fangiana HOM05D004827 ORTHO05D005395 2.9e-78 295.0 140 100.0
Haze_23732 Corylus avellana HOM05D004827 ORTHO05D005395 2.7e-71 271.9 134 97.0
Lj3g0013572 Lotus japonicus HOM05D004827 ORTHO05D005395 5.8e-66 254.2 134 87.3
Phvul.011G084400 Phaseolus vulgaris HOM05D004827 ORTHO05D005395 7.5e-66 253.8 131 90.8
Nn6g35282 Nelumbo nucifera HOM05D004827 ORTHO05D005395 1.7e-65 252.7 134 87.3
CsaV3_1G013530 Cucumis sativus L. HOM05D004827 ORTHO05D005395 8.3e-65 250.4 135 85.9
MD11G1146100 Malus domestica HOM05D004827 ORTHO05D005395 1.9e-64 249.2 124 94.4
ClCG03G002770 Citrullus lanatus HOM05D004827 ORTHO05D005395 2.4e-64 248.8 135 85.9
Sed0007609 Sechium edule HOM05D004827 ORTHO05D005395 3.2e-64 248.4 134 88.1
Medtr4g057685 Medicago truncatula HOM05D004827 ORTHO05D005395 7.0e-64 247.3 135 87.4
MD00G1032700 Malus domestica HOM05D004827 ORTHO05D005395 1.2e-63 246.5 124 93.5
Prupe.6G109100 Prunus persica HOM05D004827 ORTHO05D005395 1.2e-63 246.5 124 93.5
Manes.04G014900 Manihot esculenta HOM05D004827 ORTHO05D005395 1.6e-63 246.1 131 87.0
CSS0005897 Camellia sinensis var. sinensis HOM05D004827 ORTHO05D005395 2.0e-63 245.7 125 92.0
GSVIVG01031499001 Vitis vinifera HOM05D004827 ORTHO05D005395 2.0e-63 245.7 133 87.2
Sc15g0001580 Simmondsia chinensis HOM05D004827 ORTHO05D005395 2.7e-63 245.4 124 91.9
CiPaw.13G119600 Carya illinoinensis HOM05D004827 ORTHO05D005395 3.5e-63 245.0 124 92.7
PGR102G0165 Punica granatum HOM05D004827 ORTHO05D005395 4.6e-63 244.6 124 92.7
arahy.Tifrunner.gnm1.ann1.PTJZ35 Arachis hypogaea HOM05D004827 ORTHO05D005395 6.0e-63 244.2 139 84.9
Glyma.12G079700 Glycine max HOM05D004827 ORTHO05D005395 6.0e-63 244.2 130 86.9
TAR633G0460 Trochodendron aralioides HOM05D004827 ORTHO05D005395 7.8e-63 243.8 136 85.3
CANSAT78G0379 Cannabis sativa HOM05D004827 ORTHO05D005395 1.0e-62 243.4 128 91.4
EL10Ac9g22587 Beta vulgaris HOM05D004827 ORTHO05D005395 1.3e-62 243.0 135 85.2
arahy.Tifrunner.gnm1.ann1.4ZYX81 Arachis hypogaea HOM05D004827 ORTHO05D005395 2.3e-62 242.3 139 84.2
VMungo1127G2270 Vigna mungo HOM05D004827 ORTHO05D005395 5.0e-62 241.1 124 91.1
RcHm_v2.0_Chr5g0057511 Rosa chinensis HOM05D004827 ORTHO05D005395 6.6e-62 240.7 131 89.3
Dinv34726 Davidia involucrata HOM05D004827 ORTHO05D005395 8.6e-62 240.4 131 85.5
Psat0s3927g0040 Pisum sativum HOM05D004827 ORTHO05D005395 1.1e-61 240.0 131 85.5
Ciclev10029169m.g Citrus clementina HOM05D004827 ORTHO05D005395 1.5e-61 239.6 132 87.1
TPR.G6148 Trifolium pratense HOM05D004827 ORTHO05D005395 1.5e-61 239.6 130 87.7
Ah.01g003210 Amaranthus hybridus HOM05D004827 ORTHO05D005395 1.9e-61 239.2 141 80.9
Rhsim13G0099200 Rhododendron simsii HOM05D004827 ORTHO05D005395 2.5e-61 238.8 130 86.2
FAN11G0101 Fragaria x ananassa HOM05D004827 ORTHO05D005395 4.3e-61 238.0 131 88.5
FAN21G3549 Fragaria x ananassa HOM05D004827 ORTHO05D005395 4.3e-61 238.0 131 88.5
Glyma.11G194300 Glycine max HOM05D004827 ORTHO05D005395 9.5e-61 236.9 124 87.9
Lj2A1013G28 Lonicera japonica HOM05D004827 ORTHO05D005395 1.6e-60 236.1 130 84.6
Sopen11g027750 Solanum pennellii HOM05D004827 ORTHO05D005395 1.6e-60 236.1 131 84.0
AUR62014938 Chenopodium quinoa HOM05D004827 ORTHO05D005395 2.1e-60 235.7 141 79.4
MELO3C004950.2 Cucumis melo HOM05D004827 ORTHO05D005395 3.6e-60 235.0 124 87.1
FAN25G1724 Fragaria x ananassa HOM05D004827 ORTHO05D005395 3.6e-60 235.0 131 87.8
Sabra09G0004200 Salix brachista HOM05D004827 ORTHO05D005395 6.2e-60 234.2 131 85.5
THA.LOC104808316 Tarenaya hassleriana HOM05D004827 ORTHO05D005395 1.1e-59 233.4 134 79.9
Atru.chr3.3541 Acer truncatum HOM05D004827 ORTHO05D005395 1.4e-59 233.0 124 87.9
MBI12_g32344_MAGBIO Magnolia biondii HOM05D004827 ORTHO05D005395 1.4e-59 233.0 130 85.4
Potri.009G007200 Populus trichocarpa HOM05D004827 ORTHO05D005395 1.4e-59 233.0 131 86.3
Hund01469 Selenicereus undatus HOM05D004827 ORTHO05D005395 1.4e-59 233.0 141 80.9
PGSC0003DMG400008074 Solanum tuberosum HOM05D004827 ORTHO05D005395 1.4e-59 233.0 131 82.4
Aqoxy1G01146 Aquilegia oxysepala HOM05D004827 ORTHO05D005395 1.8e-59 232.6 140 79.3
Actinidia24133 Actinidia chinensis HOM05D004827 ORTHO05D005395 2.3e-59 232.3 131 83.2
Solyc11g069040.3 Solanum lycopersicum HOM05D004827 ORTHO05D005395 2.3e-59 232.3 124 86.3
Thecc.09G349000 Theobroma cacao HOM05D004827 ORTHO05D005395 2.3e-59 232.3 135 80.0
vmacro03268 Vaccinium macrocarpon HOM05D004827 ORTHO05D005395 2.3e-59 232.3 130 83.1
COL.COLO4_11061 Corchorus olitorius HOM05D004827 ORTHO05D005395 3.1e-59 231.9 135 82.2
AUR62029203 Chenopodium quinoa HOM05D004827 ORTHO05D005395 8.9e-59 230.3 123 85.4
Lalb_Chr03g0027631 Lupinus albus HOM05D004827 ORTHO05D005395 8.9e-59 230.3 125 85.6
CAN.G546.14 Capsicum annuum HOM05D004827 ORTHO05D005395 2.6e-58 228.8 130 81.5
PSO063G0803 Papaver somniferum HOM05D004827 ORTHO05D005395 2.6e-58 228.8 124 85.5
C05p06230 Brassica napus HOM05D004827 ORTHO05D005395 3.4e-58 228.4 134 79.1
Nitab4.5_0004993g0010 Nicotiana tabacum HOM05D004827 ORTHO05D005395 3.4e-58 228.4 130 80.0
BolC5t29377H Brassica oleracea HOM05D004827 ORTHO05D005395 4.4e-58 228.0 134 79.1
FvH4_3g30960 Fragaria vesca HOM05D004827 ORTHO05D005395 5.8e-58 227.6 123 87.8
Nitab4.5_0001442g0020 Nicotiana tabacum HOM05D004827 ORTHO05D005395 5.8e-58 227.6 130 81.5
CSS0024800 Camellia sinensis var. sinensis HOM05D004827 ORTHO05D005395 9.8e-58 226.9 125 86.4
BcaB07g34053 Brassica carinata HOM05D004827 ORTHO05D005395 1.7e-57 226.1 131 80.2
Cpa.g.sc65.38 Carica papaya HOM05D004827 ORTHO05D005395 1.7e-57 226.1 124 84.7
Duzib150G1276 Durio zibethinus HOM05D004827 ORTHO05D005395 2.2e-57 225.7 135 78.5
AL1G18470 Arabidopsis lyrata HOM05D004827 ORTHO05D005395 2.9e-57 225.3 134 78.4
FAN16G1413 Fragaria x ananassa HOM05D004827 ORTHO05D005395 2.9e-57 225.3 123 86.2
A06p05180 Brassica napus HOM05D004827 ORTHO05D005395 3.7e-57 224.9 134 78.4
CSS0040325 Camellia sinensis var. sinensis HOM05D004827 ORTHO05D005395 3.7e-57 224.9 125 85.6
Sp1g06750 Schrenkiella parvula HOM05D004827 ORTHO05D005395 3.7e-57 224.9 134 78.4
Aa31sc241G20 Aethionema arabicum HOM05D004827 ORTHO05D005395 4.9e-57 224.6 135 78.5
PSO339G5318 Papaver somniferum HOM05D004827 ORTHO05D005395 6.4e-57 224.2 124 83.9
Carub.0001s0746 Capsella rubella HOM05D004827 ORTHO05D005395 1.9e-56 222.6 134 78.4
CDE06G2782 Ceratophyllum demersum HOM05D004827 ORTHO05D005395 1.9e-56 222.6 136 76.5
Thhalv10008645m.g Eutrema salsugineum HOM05D004827 ORTHO05D005395 2.4e-56 222.2 134 77.6
Ca_19305_v3 Cicer arietinum L. HOM05D004827 ORTHO05D005395 3.2e-56 221.9 123 86.2
TWI38G0398 Tripterygium wilfordii HOM05D004827 ORTHO05D005395 3.2e-56 221.9 124 83.9
Ah.01g003220 Amaranthus hybridus HOM05D004827 ORTHO05D005395 7.1e-56 220.7 122 82.8
ATR0219G018 Amborella trichopoda HOM05D004827 ORTHO05D005395 7.1e-56 220.7 136 77.2
AT1G08110 Arabidopsis thaliana HOM05D004827 ORTHO05D005395 7.1e-56 220.7 124 83.9
CARHR007920 Cardamine hirsuta HOM05D004827 ORTHO05D005395 1.6e-55 219.5 131 78.6
Os05g0295800 Oryza sativa ssp. japonica HOM05D004827 ORTHO05D005395 2.1e-55 219.2 127 81.1
BraA06t23724Z Brassica rapa HOM05D004827 ORTHO05D005395 2.7e-55 218.8 139 75.5
Gohir.D13G238300 Gossypium hirsutum HOM05D004827 ORTHO05D005395 2.3e-54 215.7 135 76.3
Gorai.013G269200 Gossypium raimondii HOM05D004827 ORTHO05D005395 2.3e-54 215.7 135 76.3
SalBow3G2012 Salvia bowleyana HOM05D004827 ORTHO05D005395 8.6e-54 213.8 119 81.5
BcaC05g24729 Brassica carinata HOM05D004827 ORTHO05D005395 3.3e-53 211.8 127 78.0
Lsat_1_v5_gn_1_62721 Lactuca sativa HOM05D004827 ORTHO05D005395 3.3e-53 211.8 136 76.5
SEGI_26473 Sequoiadendron giganteum HOM05D004827 ORTHO05D005395 4.3e-53 211.5 128 75.0
SEGI_34492 Sequoiadendron giganteum HOM05D004827 ORTHO05D005395 4.3e-53 211.5 128 75.0
Zm00001eb086540 Zea mays HOM05D004827 ORTHO05D005395 5.6e-53 211.1 134 74.6
SGA_v2.0_scaffold263G45967 Striga asiatica HOM05D004827 ORTHO05D005395 1.2e-52 209.9 119 78.2
MSTRG.21095 Avicennia marina HOM05D004827 ORTHO05D005395 2.1e-52 209.1 119 79.8
MSTRG.17890 Avicennia marina HOM05D004827 ORTHO05D005395 4.7e-52 208.0 119 79.0
Duzib170G0342 Durio zibethinus HOM05D004827 ORTHO05D005395 4.7e-52 208.0 123 78.0
THA.LOC104800584 Tarenaya hassleriana HOM05D004827 ORTHO05D005395 4.7e-52 208.0 134 73.1
Gohir.A13G232600 Gossypium hirsutum HOM05D004827 ORTHO05D005395 6.2e-52 207.6 123 78.0
Cc01_g10500 Coffea canephora HOM05D004827 ORTHO05D005395 4.0e-51 204.9 123 76.4
HanXRQChr11g0346211 Helianthus annuus HOM05D004827 ORTHO05D005395 8.9e-51 203.8 131 74.0
Migut.D02265 Erythranthe guttata HOM05D004827 ORTHO05D005395 1.5e-50 203.0 130 71.5
Mapoly0033s0083 Marchantia polymorpha HOM05D004827 ORTHO05D005395 1.5e-50 203.0 124 74.2
HPP92_002620 Vanilla planifolia HOM05D004827 ORTHO05D005395 2.6e-50 202.2 123 75.6
ECA248G1504 Erigeron canadensis HOM05D004827 ORTHO05D005395 3.4e-50 201.8 134 72.4
SMO353G0047 Selaginella moellendorffii HOM05D004827 ORTHO05D005395 7.6e-50 200.7 119 74.8
HPP92_002675 Vanilla planifolia HOM05D004827 ORTHO05D005395 9.9e-50 200.3 123 74.8
SGA_v2.0_scaffold116G32194 Striga asiatica HOM05D004827 ORTHO05D005395 2.9e-49 198.7 119 73.9
Gohir.A03G030200 Gossypium hirsutum HOM05D004827 ORTHO05D005395 5.4e-48 194.5 121 72.7
Gohir.D03G138300 Gossypium hirsutum HOM05D004827 ORTHO05D005395 1.2e-47 193.4 121 71.9
Gorai.003G145000 Gossypium raimondii HOM05D004827 ORTHO05D005395 1.2e-47 193.4 121 71.9
Gohir.A03G030000 Gossypium hirsutum HOM05D004827 ORTHO05D005395 1.6e-47 193.0 125 72.0
Peaxi162Scf00682g00012 Petunia axillaris HOM05D004827 ORTHO05D005395 2.7e-47 192.2 132 71.2
Mapoly0033s0085 Marchantia polymorpha HOM05D004827 ORTHO05D005395 4.6e-47 191.4 124 71.8
Gohir.D03G138400 Gossypium hirsutum HOM05D004827 ORTHO05D005395 7.8e-47 190.7 125 71.2
Gorai.003G145100 Gossypium raimondii HOM05D004827 ORTHO05D005395 7.8e-47 190.7 125 71.2
Gohir.A03G030100 Gossypium hirsutum HOM05D004827 ORTHO05D005395 1.3e-46 189.9 125 70.4
Gohir.D03G138500 Gossypium hirsutum HOM05D004827 ORTHO05D005395 1.3e-46 189.9 125 70.4
Gorai.003G145200 Gossypium raimondii HOM05D004827 ORTHO05D005395 1.3e-46 189.9 125 70.4
HanXRQChr01g0019511 Helianthus annuus HOM05D004827 ORTHO05D005395 1.2e-44 183.3 119 72.3
Pp3c10_11200 Physcomitrium patens HOM05D004827 ORTHO05D005395 2.8e-44 182.2 118 67.8
ECA248G0211 Erigeron canadensis HOM05D004827 ORTHO05D005395 2.9e-41 172.2 134 61.9
THA.LOC104817647 Tarenaya hassleriana HOM05D004827 ORTHO05D005395 3.8e-41 171.8 93 82.8
BcaB07g34056 Brassica carinata HOM05D004827 ORTHO05D005395 4.9e-41 171.4 165 55.8
Cre04.g216100 Chlamydomonas reinhardtii HOM05D004827 ORTHO05D005395 1.1e-40 170.2 112 67.9
Glyma.11G194200 Glycine max HOM05D004827 ORTHO05D005395 4.2e-40 168.3 93 83.9
Oeu018368.2 Olea europaea HOM05D004827 ORTHO05D005395 1.2e-39 166.8 152 52.6
SGA_v2.0_scaffold180G39601 Striga asiatica HOM05D004827 ORTHO05D005395 6.6e-38 161.0 134 56.7
unitig_736.g22404 Utricularia gibba HOM05D004827 ORTHO05D005395 5.6e-37 157.9 125 60.8
Hma1.2p1_1647F.1_g295520 Hydrangea macrophylla HOM05D004827 ORTHO05D005395 6.9e-35 151.0 71 95.8
QL01p015669 Quercus lobata HOM05D004827 ORTHO05D005395 6.9e-35 151.0 72 94.4
RcHm_v2.0_Chr5g0057571 Rosa chinensis HOM05D004827 ORTHO05D005395 6.4e-33 144.4 72 91.7
Gorai.003G145300 Gossypium raimondii HOM05D004827 ORTHO05D005395 2.1e-31 139.4 119 60.5
Gohir.D03G138550 Gossypium hirsutum HOM05D004827 ORTHO05D005395 1.1e-29 133.7 119 58.8
Pp3c1_34670 Physcomitrium patens HOM05D004827 ORTHO05D005395 1.8e-27 126.3 119 53.8
Pp3c14_6610 Physcomitrium patens HOM05D004827 ORTHO05D005395 1.7e-25 119.8 74 67.6
Oeu018480.1 Olea europaea HOM05D004827 ORTHO05D005395 4.9e-25 118.2 63 79.4
QL01p015675 Quercus lobata HOM05D004827 ORTHO05D005395 4.6e-23 111.7 60 88.3
BcaC01g02577 Brassica carinata HOM05D004827 ORTHO05D005395 8.7e-22 107.5 74 74.3
C03p63280 Brassica napus HOM05D004827 ORTHO05D005395 1.1e-21 107.1 72 75.0
CBR_g8002 Chara braunii HOM05D000019 ORTHO05D000048 1.9e-21 106.3 71 71.8
BolC3t18580H Brassica oleracea HOM05D004827 ORTHO05D005395 5.6e-21 104.8 72 73.6
AUR62029205 Chenopodium quinoa HOM05D004827 ORTHO05D005395 1.6e-20 103.2 79 65.8
MBI18_g02639_MAGBIO Magnolia biondii HOM05D004827 ORTHO05D005395 6.9e-19 97.8 151 39.7
Ca_19304_v3 Cicer arietinum L. HOM05D004827 ORTHO05D005395 1.7e-17 93.2 51 88.2
C07p01610 Brassica napus HOM05D004827 ORTHO05D005395 1.1e-16 90.5 59 69.5
CBR_g8005 Chara braunii HOM05D004827 ORTHO05D005395 1.1e-16 90.5 52 69.2
C07p01580 Brassica napus HOM05D004827 ORTHO05D005395 7.9e-15 84.3 74 63.5
Cfa025448 Carpinus fangiana HOM05D004827 ORTHO05D005395 8.2e-12 74.3 81 46.9
PRCOL_00001503 Prasinoderma coloniale HOM05D004827 ORTHO05D005395 4.1e-11 72.0 110 40.0


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