Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010232 Carpinus fangiana HOM05D006684 ORTHO05D008443 4.8e-118 427.9 232 100.0
CiPaw.01G260000 Carya illinoinensis HOM05D006684 ORTHO05D008443 3.1e-72 275.8 229 70.7
QL08p051764 Quercus lobata HOM05D006684 ORTHO05D008443 2.3e-67 259.6 234 67.5
Haze_16738 Corylus avellana HOM05D006684 ORTHO05D008443 5.8e-63 245.0 141 89.4
GSVIVG01027546001 Vitis vinifera HOM05D006684 ORTHO05D008443 4.6e-60 235.3 243 57.2
CSS0020305 Camellia sinensis var. sinensis HOM05D006684 ORTHO05D008443 1.7e-59 233.4 233 55.8
Dinv32395 Davidia involucrata HOM05D006684 ORTHO05D008443 2.3e-59 233.0 245 56.7
Ciclev10022036m.g Citrus clementina HOM05D006684 ORTHO05D008443 5.1e-59 231.9 237 59.1
Atru.chr5.338 Acer truncatum HOM05D006684 ORTHO05D008443 2.5e-58 229.6 237 57.4
Cpa.g.sc18.149 Carica papaya HOM05D006684 ORTHO05D008443 9.9e-55 217.6 237 55.7
TAR636G0929 Trochodendron aralioides HOM05D006684 ORTHO05D008443 4.9e-54 215.3 235 53.2
MELO3C022508.2 Cucumis melo HOM05D006684 ORTHO05D008443 2.4e-53 213.0 229 57.2
Sed0022399 Sechium edule HOM05D006684 ORTHO05D008443 4.6e-52 208.8 243 55.1
Prupe.2G148900 Prunus persica HOM05D006684 ORTHO05D008443 2.3e-51 206.5 243 53.1
Aqoxy7G00540 Aquilegia oxysepala HOM05D006684 ORTHO05D008443 9.6e-50 201.1 235 51.5
COL.COLO4_12585 Corchorus olitorius HOM05D006684 ORTHO05D008443 6.2e-49 198.4 230 52.2
Nn6g34351 Nelumbo nucifera HOM05D006684 ORTHO05D008443 6.2e-49 198.4 241 52.3
CsaV3_6G006090 Cucumis sativus L. HOM05D006684 ORTHO05D008443 1.4e-48 197.2 228 59.2
LjContig00136g0018410 Lotus japonicus HOM05D006684 ORTHO05D008443 3.1e-48 196.1 231 52.4
Eucgr.E01357 Eucalyptus grandis HOM05D006684 ORTHO05D008443 4.0e-48 195.7 240 50.4
Manes.05G043400 Manihot esculenta HOM05D006684 ORTHO05D008443 5.8e-47 191.8 240 55.4
RcHm_v2.0_Chr1g0351131 Rosa chinensis HOM05D006684 ORTHO05D008443 5.8e-47 191.8 236 53.8
Nitab4.5_0010110g0010 Nicotiana tabacum HOM05D006684 ORTHO05D008443 1.3e-46 190.7 229 50.7
Gorai.007G092800 Gossypium raimondii HOM05D006684 ORTHO05D008443 1.7e-46 190.3 229 50.7
FvH4_7g12340 Fragaria vesca HOM05D006684 ORTHO05D008443 2.2e-46 189.9 234 55.1
FAN06G2821 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.2e-46 189.9 234 55.1
FAN06G3889 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.2e-46 189.9 234 55.1
CANSAT94G0012 Cannabis sativa HOM05D006684 ORTHO05D008443 6.4e-46 188.3 233 56.7
FAN10G0264 Fragaria x ananassa HOM05D006684 ORTHO05D008443 1.1e-45 187.6 235 56.2
Glyma.09G267200 Glycine max HOM05D006684 ORTHO05D008443 1.1e-45 187.6 238 50.8
Gohir.D11G086900 Gossypium hirsutum HOM05D006684 ORTHO05D008443 1.4e-45 187.2 229 50.2
FAN01G2432 Fragaria x ananassa HOM05D006684 ORTHO05D008443 2.4e-45 186.4 237 54.0
PSO478G1842 Papaver somniferum HOM05D006684 ORTHO05D008443 2.4e-45 186.4 242 52.9
Thecc.01G373000 Theobroma cacao HOM05D006684 ORTHO05D008443 2.4e-45 186.4 235 53.6
MSTRG.4882 Avicennia marina HOM05D006684 ORTHO05D008443 3.2e-45 186.0 230 51.3
MD02G1199700 Malus domestica HOM05D006684 ORTHO05D008443 3.2e-45 186.0 240 55.4
ClCG06G000300 Citrullus lanatus HOM05D006684 ORTHO05D008443 4.2e-45 185.7 278 49.6
Sopen05g028070 Solanum pennellii HOM05D006684 ORTHO05D008443 5.4e-45 185.3 237 48.1
Gohir.A11G082800 Gossypium hirsutum HOM05D006684 ORTHO05D008443 1.2e-44 184.1 229 48.9
TWI59G0969 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 3.5e-44 182.6 227 49.8
FAN03G1779 Fragaria x ananassa HOM05D006684 ORTHO05D008443 4.6e-44 182.2 245 53.9
PGSC0003DMG400021635 Solanum tuberosum HOM05D006684 ORTHO05D008443 1.0e-43 181.0 230 48.7
Manes.12G048300 Manihot esculenta HOM05D006684 ORTHO05D008443 2.3e-43 179.9 243 51.4
Hund17005 Selenicereus undatus HOM05D006684 ORTHO05D008443 2.3e-43 179.9 238 51.3
SalBow5G0966 Salvia bowleyana HOM05D006684 ORTHO05D008443 1.1e-42 177.6 237 49.4
SalBow5G5079 Salvia bowleyana HOM05D006684 ORTHO05D008443 1.5e-42 177.2 237 49.4
FAN10G2097 Fragaria x ananassa HOM05D006684 ORTHO05D008443 3.3e-42 176.0 232 54.7
Lalb_Chr03g0039091 Lupinus albus HOM05D006684 ORTHO05D008443 5.6e-42 175.3 228 49.1
arahy.Tifrunner.gnm1.ann1.3Z62KU Arachis hypogaea HOM05D006684 ORTHO05D008443 1.3e-41 174.1 235 51.5
PGR042G1390 Punica granatum HOM05D006684 ORTHO05D008443 1.6e-41 173.7 237 46.8
VMungo1383G3715 Vigna mungo HOM05D006684 ORTHO05D008443 3.7e-41 172.6 230 47.0
C04p71620 Brassica napus HOM05D000147 ORTHO05D007841 6.2e-41 171.8 238 48.7
Phvul.008G074700 Phaseolus vulgaris HOM05D006684 ORTHO05D008443 6.2e-41 171.8 233 46.8
EL10Ac1g00926 Beta vulgaris HOM05D006684 ORTHO05D008443 9.0e-40 167.9 250 45.6
CDE04G1869 Ceratophyllum demersum HOM05D006684 ORTHO05D008443 9.0e-40 167.9 239 47.3
Sp4g27550 Schrenkiella parvula HOM05D006684 ORTHO05D008443 9.0e-40 167.9 236 47.9
BcaC02g07085 Brassica carinata HOM05D006684 ORTHO05D008443 1.5e-39 167.2 236 49.2
arahy.Tifrunner.gnm1.ann1.CFQ18P Arachis hypogaea HOM05D006684 ORTHO05D008443 2.6e-39 166.4 241 49.0
BolC4t28667H Brassica oleracea HOM05D000147 ORTHO05D007841 4.5e-39 165.6 236 47.0
BcaB06g29418 Brassica carinata HOM05D006684 ORTHO05D008443 5.8e-39 165.2 236 47.0
ECA240G0119 Erigeron canadensis HOM05D006684 ORTHO05D008443 7.6e-39 164.9 225 48.9
BraA04t18849Z Brassica rapa HOM05D000147 ORTHO05D007841 1.3e-38 164.1 234 47.4
SGA_v2.0_scaffold11G05605 Striga asiatica HOM05D006684 ORTHO05D008443 1.3e-38 164.1 232 49.1
Thhalv10001611m.g Eutrema salsugineum HOM05D006684 ORTHO05D008443 4.9e-38 162.2 239 49.4
Potri.014G072400 Populus trichocarpa HOM05D006684 ORTHO05D008443 4.9e-38 162.2 230 49.6
THA.LOC104801995 Tarenaya hassleriana HOM05D006684 ORTHO05D008443 6.4e-38 161.8 236 48.3
Medtr7g075640 Medicago truncatula HOM05D006684 ORTHO05D008443 8.4e-38 161.4 231 46.3
Os06g0129800 Oryza sativa ssp. japonica HOM05D006684 ORTHO05D008443 8.4e-38 161.4 244 47.5
Cc02_g36430 Coffea canephora HOM05D006684 ORTHO05D008443 1.1e-37 161.0 227 44.5
Aa31LG1G27020 Aethionema arabicum HOM05D006684 ORTHO05D008443 1.9e-37 160.2 232 49.6
TPR.G37765 Trifolium pratense HOM05D006684 ORTHO05D008443 7.1e-37 158.3 233 47.6
Peaxi162Scf00207g00165 Petunia axillaris HOM05D006684 ORTHO05D008443 9.3e-37 157.9 236 49.2
vmacro20994 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 1.2e-36 157.5 358 38.3
Hma1.2p1_0053F.1_g030880 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 1.0e-35 154.5 244 43.9
AL4G44700 Arabidopsis lyrata HOM05D006684 ORTHO05D008443 1.8e-35 153.7 227 45.8
HanXRQChr03g0093671 Helianthus annuus HOM05D006684 ORTHO05D008443 2.3e-35 153.3 227 48.0
CAN.G333.1 Capsicum annuum HOM05D006684 ORTHO05D008443 3.9e-35 152.5 236 48.3
CARHR140710 Cardamine hirsuta HOM05D006684 ORTHO05D008443 5.1e-35 152.1 236 48.7
Nitab4.5_0001702g0200 Nicotiana tabacum HOM05D006684 ORTHO05D008443 8.7e-35 151.4 243 47.3
Zm00001eb378390 Zea mays HOM05D006684 ORTHO05D008443 1.9e-34 150.2 241 45.6
A04p33890 Brassica napus HOM05D000147 ORTHO05D007841 3.3e-34 149.4 234 45.7
Haze_16739 Corylus avellana HOM05D006684 ORTHO05D008443 3.3e-34 149.4 77 97.4
PSO782G3084 Papaver somniferum HOM05D006684 ORTHO05D008443 3.3e-34 149.4 174 56.9
Duzib133G0994 Durio zibethinus HOM05D006684 ORTHO05D008443 7.4e-34 148.3 226 44.2
Manes.12G048301 Manihot esculenta HOM05D006684 ORTHO05D008443 1.3e-33 147.5 237 47.3
AT2G45520 Arabidopsis thaliana HOM05D006684 ORTHO05D008443 1.6e-33 147.1 224 49.1
Carub.0004s2814 Capsella rubella HOM05D006684 ORTHO05D008443 1.1e-32 144.4 225 47.6
Manes.12G053501 Manihot esculenta HOM05D006684 ORTHO05D008443 1.8e-32 143.7 237 46.8
AUR62004244 Chenopodium quinoa HOM05D006684 ORTHO05D008443 2.4e-32 143.3 222 43.7
Duzib138G0092 Durio zibethinus HOM05D006684 ORTHO05D008443 2.6e-31 139.8 184 52.7
Lsat_1_v5_gn_3_135520 Lactuca sativa HOM05D006684 ORTHO05D008443 1.7e-30 137.1 226 46.0
BolC4t22271H Brassica oleracea HOM05D006684 ORTHO05D008443 2.2e-30 136.7 225 44.0
Rhsim01G0161500 Rhododendron simsii HOM05D006684 ORTHO05D008443 9.3e-29 131.3 167 53.3
Solyc05g048750.3 Solanum lycopersicum HOM05D006684 ORTHO05D008443 1.6e-28 130.6 115 62.6
Sc02g0002410 Simmondsia chinensis HOM05D006684 ORTHO05D008443 2.1e-28 130.2 245 39.6
AUR62013604 Chenopodium quinoa HOM05D006684 ORTHO05D008443 7.9e-28 128.3 236 41.1
Migut.N01586 Erythranthe guttata HOM05D006684 ORTHO05D008443 6.3e-25 118.6 107 59.8
BraA05t19524Z Brassica rapa HOM05D006684 ORTHO05D008443 4.1e-24 115.9 218 42.2
ATR0757G101 Amborella trichopoda HOM05D006684 ORTHO05D008443 5.3e-24 115.5 170 45.3
TWI23G1019 Tripterygium wilfordii HOM05D006684 ORTHO05D008443 4.5e-23 112.5 110 57.3
Ah.07g198740 Amaranthus hybridus HOM05D006684 ORTHO05D008443 5.9e-23 112.1 201 42.3
Actinidia33456 Actinidia chinensis HOM05D006684 ORTHO05D008443 1.7e-22 110.5 141 45.4
Duzib138G0657 Durio zibethinus HOM05D006684 ORTHO05D008443 2.9e-22 109.8 141 49.6
vmacro20995 Vaccinium macrocarpon HOM05D006684 ORTHO05D008443 2.9e-22 109.8 163 50.9
Oeu036610.1 Olea europaea HOM05D006684 ORTHO05D008443 3.2e-21 106.3 78 67.9
MBI12_g38018_MAGBIO Magnolia biondii HOM05D006684 ORTHO05D008443 4.2e-21 105.9 156 46.2
SEGI_35511 Sequoiadendron giganteum HOM05D006684 ORTHO05D008443 1.6e-20 104.0 251 35.5
Ca_07836_v3 Cicer arietinum L. HOM05D006684 ORTHO05D008443 2.1e-20 103.6 71 67.6
Psat3g104080 Pisum sativum HOM05D006684 ORTHO05D008443 7.9e-20 101.7 77 64.9
C04p06480 Brassica napus HOM05D000921 ORTHO05D002852 2.3e-19 100.1 140 47.1
unitig_578.g16483 Utricularia gibba HOM05D006684 ORTHO05D008443 5.1e-19 99.0 230 36.1
Pp3c22_10350 Physcomitrium patens HOM05D006684 ORTHO05D008443 5.9e-15 85.5 236 35.6
HPP92_020257 Vanilla planifolia HOM05D006684 ORTHO05D008443 5.9e-15 85.5 209 34.0
SGA_v2.0_scaffold43G16466 Striga asiatica HOM05D006684 ORTHO05D008443 7.7e-15 85.1 115 42.6
SMO347G0023 Selaginella moellendorffii HOM05D006684 ORTHO05D008443 1.7e-14 84.0 223 33.6
Zm00001eb269540 Zea mays HOM05D006684 ORTHO05D008443 5.0e-14 82.4 86 55.8
Mapoly0084s0081 Marchantia polymorpha HOM05D006684 ORTHO05D008443 2.3e-11 73.6 230 32.2
AagrBONN_evm.TU.Sc2ySwM_344.4110 Anthoceros agrestis HOM05D006684 ORTHO05D008443 3.9e-11 72.8 232 30.2
Hma1.2p1_0053F.1_g030890 Hydrangea macrophylla HOM05D006684 ORTHO05D008443 6.7e-11 72.0 98 44.9


User provided reference genes

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