Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010215 Carpinus fangiana HOM05D005900 ORTHO05D007306 6.5e-123 444.1 233 100.0
Cfa011664 Carpinus fangiana HOM05D005900 ORTHO05D007306 3.1e-109 398.7 233 90.6
Haze_24259 Corylus avellana HOM05D005900 ORTHO05D007306 1.0e-107 393.7 233 91.0
CiPaw.05G100400 Carya illinoinensis HOM05D005900 ORTHO05D007306 4.2e-69 265.4 210 70.0
QL03p048972 Quercus lobata HOM05D005900 ORTHO05D007306 3.6e-65 252.3 236 65.3
CiPaw.03G184600 Carya illinoinensis HOM05D005900 ORTHO05D007306 1.2e-60 237.3 184 70.1
Dinv35828 Davidia involucrata HOM05D005900 ORTHO05D007306 7.6e-47 191.4 235 52.3
Haze_23070 Corylus avellana HOM05D005900 ORTHO05D007306 1.0e-46 191.0 181 66.9
CANSAT80G1963 Cannabis sativa HOM05D005900 ORTHO05D007306 3.2e-45 186.0 235 51.9
CANSAT80G1771 Cannabis sativa HOM05D005900 ORTHO05D007306 2.3e-43 179.9 235 50.6
Hma1.2p1_1494F.1_g286930 Hydrangea macrophylla HOM05D005900 ORTHO05D007306 2.5e-42 176.4 250 50.0
TAR371G1211 Trochodendron aralioides HOM05D005900 ORTHO05D007306 7.4e-42 174.9 253 47.4
Dinv16498 Davidia involucrata HOM05D005900 ORTHO05D007306 1.3e-41 174.1 212 54.2
Oeu055297.1 Olea europaea HOM05D005900 ORTHO05D007306 1.3e-41 174.1 229 50.7
CSS0005312 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 1.8e-40 170.2 230 48.7
CsaV3_4G033440 Cucumis sativus L. HOM05D005900 ORTHO05D007306 1.5e-39 167.2 239 47.3
GSVIVG01001102001 Vitis vinifera HOM05D005900 ORTHO05D007306 2.0e-39 166.8 232 48.7
Nitab4.5_0000191g0220 Nicotiana tabacum HOM05D005900 ORTHO05D007306 4.5e-39 165.6 233 49.8
Peaxi162Scf00698g00117 Petunia axillaris HOM05D005900 ORTHO05D007306 5.9e-39 165.2 232 48.7
Nitab4.5_0000059g0460 Nicotiana tabacum HOM05D005900 ORTHO05D007306 7.6e-39 164.9 233 49.8
Cpa.g.sc36.199 Carica papaya HOM05D005900 ORTHO05D007306 1.7e-38 163.7 217 48.8
Sabra01G0047700 Salix brachista HOM05D005900 ORTHO05D007306 2.5e-37 159.8 228 49.6
vmacro15379 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 4.2e-37 159.1 244 45.9
TAR629G1598 Trochodendron aralioides HOM05D005900 ORTHO05D007306 5.5e-37 158.7 226 44.7
Peaxi162Scf00079g01513 Petunia axillaris HOM05D005900 ORTHO05D007306 2.7e-36 156.4 244 45.9
Potri.001G068500 Populus trichocarpa HOM05D005900 ORTHO05D007306 6.1e-36 155.2 228 48.2
Eucgr.B02910 Eucalyptus grandis HOM05D005900 ORTHO05D007306 7.9e-36 154.8 239 44.4
Sopen09g004610 Solanum pennellii HOM05D005900 ORTHO05D007306 1.3e-35 154.1 230 46.1
PGR102G3094 Punica granatum HOM05D005900 ORTHO05D007306 5.1e-35 152.1 231 46.3
PGSC0003DMG400008953 Solanum tuberosum HOM05D005900 ORTHO05D007306 6.7e-35 151.8 230 46.5
MSTRG.22403 Avicennia marina HOM05D005900 ORTHO05D007306 8.7e-35 151.4 231 45.9
Atru.chr12.1436 Acer truncatum HOM05D005900 ORTHO05D007306 9.7e-34 147.9 238 44.1
Solyc09g009850.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.3e-33 147.5 230 45.2
Ciclev10005823m.g Citrus clementina HOM05D005900 ORTHO05D007306 2.8e-33 146.4 226 46.0
Cc04_g15880 Coffea canephora HOM05D005900 ORTHO05D007306 8.2e-33 144.8 226 43.4
PGSC0003DMG400022718 Solanum tuberosum HOM05D005900 ORTHO05D007306 8.2e-33 144.8 233 44.6
Sed0015511 Sechium edule HOM05D005900 ORTHO05D007306 1.8e-32 143.7 238 45.0
RcHm_v2.0_Chr4g0428761 Rosa chinensis HOM05D005900 ORTHO05D007306 2.4e-32 143.3 235 42.1
SalBow2G0170 Salvia bowleyana HOM05D005900 ORTHO05D007306 2.4e-32 143.3 212 46.7
Rhsim12G0016500 Rhododendron simsii HOM05D005900 ORTHO05D007306 4.1e-32 142.5 235 43.4
SGA_v2.0_scaffold154G37193 Striga asiatica HOM05D005900 ORTHO05D007306 5.3e-32 142.1 236 43.2
DCAR_030841 Daucus carota HOM05D005900 ORTHO05D007306 6.9e-32 141.7 194 45.4
Prupe.1G213900 Prunus persica HOM05D005900 ORTHO05D007306 6.9e-32 141.7 221 45.7
FAN07G0479 Fragaria x ananassa HOM05D005900 ORTHO05D007306 2.2e-30 136.7 230 40.9
SGA_v2.0_scaffold28G11983 Striga asiatica HOM05D005900 ORTHO05D007306 3.8e-30 136.0 236 41.9
TWI36G0396 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 3.8e-30 136.0 207 44.0
FvH4_4g22530 Fragaria vesca HOM05D005900 ORTHO05D007306 5.0e-30 135.6 228 42.1
FAN12G4206 Fragaria x ananassa HOM05D005900 ORTHO05D007306 5.0e-30 135.6 228 42.1
Sc06g0007790 Simmondsia chinensis HOM05D005900 ORTHO05D007306 1.1e-29 134.4 214 43.9
Migut.C01115 Erythranthe guttata HOM05D005900 ORTHO05D007306 1.4e-29 134.0 220 41.4
Eucgr.E01503 Eucalyptus grandis HOM05D005900 ORTHO05D007306 2.5e-29 133.3 238 41.6
Hund20854 Selenicereus undatus HOM05D005900 ORTHO05D007306 3.2e-29 132.9 220 44.1
vmacro01013 Vaccinium macrocarpon HOM05D005900 ORTHO05D007306 3.2e-29 132.9 280 38.2
Oeu001539.2 Olea europaea HOM05D005900 ORTHO05D007306 7.2e-29 131.7 279 39.4
Solyc01g008760.4 Solanum lycopersicum HOM05D005900 ORTHO05D007306 1.2e-28 131.0 233 43.3
ClCG11G017800 Citrullus lanatus HOM05D005900 ORTHO05D007306 1.6e-28 130.6 239 41.4
CDE09G0879 Ceratophyllum demersum HOM05D005900 ORTHO05D007306 3.6e-28 129.4 226 43.4
Ca_23210_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 6.1e-28 128.6 231 42.4
Lsat_1_v5_gn_2_95001 Lactuca sativa HOM05D005900 ORTHO05D007306 7.9e-28 128.3 205 43.9
MBI11_g07033_MAGBIO Magnolia biondii HOM05D005900 ORTHO05D007306 1.8e-27 127.1 234 43.2
MD13G1131700 Malus domestica HOM05D005900 ORTHO05D007306 3.0e-27 126.3 196 44.4
Migut.C00405 Erythranthe guttata HOM05D005900 ORTHO05D007306 3.9e-27 125.9 221 42.1
Aa31LG1G17260 Aethionema arabicum HOM05D005900 ORTHO05D007306 5.1e-27 125.6 225 40.9
CSS0033783 Camellia sinensis var. sinensis HOM05D005900 ORTHO05D007306 5.1e-27 125.6 161 52.2
Ca_13888_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 6.7e-27 125.2 231 41.1
Gorai.002G021100 Gossypium raimondii HOM05D005900 ORTHO05D007306 1.1e-26 124.4 236 41.9
Lalb_Chr15g0079851 Lupinus albus HOM05D005900 ORTHO05D007306 1.5e-26 124.0 231 43.3
MD16G1142000 Malus domestica HOM05D005900 ORTHO05D007306 1.5e-26 124.0 196 43.4
Thecc.02G191100 Theobroma cacao HOM05D005900 ORTHO05D007306 2.0e-26 123.6 242 40.5
TWI18G0365 Tripterygium wilfordii HOM05D005900 ORTHO05D007306 2.6e-26 123.2 214 40.2
Gohir.D01G018900 Gossypium hirsutum HOM05D005900 ORTHO05D007306 4.4e-26 122.5 236 41.5
FAN17G1441 Fragaria x ananassa HOM05D005900 ORTHO05D007306 5.7e-26 122.1 149 45.6
COL.COLO4_27171 Corchorus olitorius HOM05D005900 ORTHO05D007306 3.7e-25 119.4 245 40.0
Gohir.A01G020300 Gossypium hirsutum HOM05D005900 ORTHO05D007306 4.8e-25 119.0 236 41.1
AUR62006518 Chenopodium quinoa HOM05D005900 ORTHO05D007306 1.1e-24 117.9 220 40.9
ECA238G4295 Erigeron canadensis HOM05D005900 ORTHO05D007306 1.4e-24 117.5 177 45.2
arahy.Tifrunner.gnm1.ann1.5NZU5R Arachis hypogaea HOM05D005900 ORTHO05D007306 3.1e-24 116.3 230 37.8
EL10Ac1g01696 Beta vulgaris HOM05D005900 ORTHO05D007306 3.1e-24 116.3 218 41.3
Lj6g0004130 Lotus japonicus HOM05D005900 ORTHO05D007306 1.5e-23 114.0 236 38.1
AUR62025013 Chenopodium quinoa HOM05D005900 ORTHO05D007306 2.6e-23 113.2 220 39.1
Lj3g0021746 Lotus japonicus HOM05D005900 ORTHO05D007306 2.6e-23 113.2 228 39.0
Sp2g27740 Schrenkiella parvula HOM05D005900 ORTHO05D007306 3.4e-23 112.8 228 39.0
arahy.Tifrunner.gnm1.ann1.UQH0GN Arachis hypogaea HOM05D005900 ORTHO05D007306 4.5e-23 112.5 237 38.0
Psat4g204640 Pisum sativum HOM05D005900 ORTHO05D007306 1.7e-22 110.5 218 37.2
Glyma.07G200400 Glycine max HOM05D005900 ORTHO05D007306 6.5e-22 108.6 229 38.9
Medtr8g012410 Medicago truncatula HOM05D005900 ORTHO05D007306 6.5e-22 108.6 236 37.7
PSO170G6181 Papaver somniferum HOM05D005900 ORTHO05D007306 6.5e-22 108.6 219 39.3
BcaC03g18270 Brassica carinata HOM05D005900 ORTHO05D007306 1.1e-21 107.8 176 41.5
BraA02t09265Z Brassica rapa HOM05D005900 ORTHO05D007306 1.1e-21 107.8 176 40.9
TPR.G16445 Trifolium pratense HOM05D005900 ORTHO05D007306 1.1e-21 107.8 226 38.1
A02p43400 Brassica napus HOM05D005900 ORTHO05D007306 1.4e-21 107.5 176 40.9
THA.LOC104799437 Tarenaya hassleriana HOM05D005900 ORTHO05D007306 1.9e-21 107.1 182 42.3
Glyma.13G175800 Glycine max HOM05D005900 ORTHO05D007306 2.5e-21 106.7 229 38.9
VMungo0331G1117 Vigna mungo HOM05D005900 ORTHO05D007306 2.5e-21 106.7 235 37.4
BolC2t12415H Brassica oleracea HOM05D005900 ORTHO05D007306 3.2e-21 106.3 177 41.2
Os01g0259900 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 7.2e-21 105.1 225 35.1
BcaB07g29751 Brassica carinata HOM05D005900 ORTHO05D007306 1.6e-20 104.0 227 37.0
MELO3C032361.2 Cucumis melo HOM05D005900 ORTHO05D007306 2.1e-20 103.6 184 42.9
Os08g0422600 Oryza sativa ssp. japonica HOM05D005900 ORTHO05D007306 2.7e-20 103.2 214 39.7
C02p63500 Brassica napus HOM05D005900 ORTHO05D007306 8.0e-20 101.7 226 37.2
PSO017G3279 Papaver somniferum HOM05D005900 ORTHO05D007306 1.0e-19 101.3 213 37.1
BcaC08g46818 Brassica carinata HOM05D005900 ORTHO05D007306 1.8e-19 100.5 138 42.0
BolC6t39862H Brassica oleracea HOM05D005900 ORTHO05D007306 2.3e-19 100.1 138 42.0
Thhalv10004934m.g Eutrema salsugineum HOM05D005900 ORTHO05D007306 2.0e-18 97.1 227 37.9
C03p61480 Brassica napus HOM05D005900 ORTHO05D007306 9.7e-18 94.7 219 36.5
Zm00001eb127900 Zea mays HOM05D005900 ORTHO05D007306 1.3e-17 94.4 224 33.9
Phvul.002G231200 Phaseolus vulgaris HOM05D005900 ORTHO05D007306 2.8e-17 93.2 228 36.8
Aqoxy4G02969 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 4.8e-17 92.4 219 35.2
Ca_13890_v3 Cicer arietinum L. HOM05D005900 ORTHO05D007306 3.1e-16 89.7 99 51.5
Duzib052G0736 Durio zibethinus HOM05D005900 ORTHO05D007306 7.0e-16 88.6 262 34.4
ATR0582G041 Amborella trichopoda HOM05D005900 ORTHO05D007306 1.2e-15 87.8 192 35.9
Manes.08G100300 Manihot esculenta HOM05D005900 ORTHO05D007306 3.8e-14 82.8 231 32.0
AL8G42100 Arabidopsis lyrata HOM05D005900 ORTHO05D007306 6.5e-14 82.0 226 35.4
BcaB04g19984 Brassica carinata HOM05D005900 ORTHO05D007306 1.2e-12 77.8 143 39.9
AT5G64680 Arabidopsis thaliana HOM05D005900 ORTHO05D007306 1.8e-11 73.9 177 36.2
Aqoxy4G03322 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 4.0e-11 72.8 167 35.9
Aqoxy83s001 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 4.0e-11 72.8 167 36.5
Atru.chr12.1335 Acer truncatum HOM05D005900 ORTHO05D007306 3.3e-10 69.7 69 50.7
Aqoxy2G04193 Aquilegia oxysepala HOM05D005900 ORTHO05D007306 3.1e-08 63.2 153 35.9
Cc04_g15860 Coffea canephora HOM05D005900 ORTHO05D007306 4.1e-08 62.8 79 44.3
Carub.0008s2548 Capsella rubella HOM05D005900 ORTHO05D007306 7.0e-08 62.0 185 34.1
unitig_747.g21266 Utricularia gibba HOM05D005900 ORTHO05D007306 3.8e-06 56.2 233 27.5


User provided reference genes

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