Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010172 Carpinus fangiana HOM05D006712 ORTHO05D008219 1.4e-204 716.1 371 100.0
CiPaw.13G129200 Carya illinoinensis HOM05D006712 ORTHO05D008219 3.1e-151 538.9 375 77.9
Haze_23559 Corylus avellana HOM05D006712 ORTHO05D008219 4.1e-119 432.2 285 82.1
FAN16G2749 Fragaria x ananassa HOM05D006712 ORTHO05D008219 6.3e-112 408.3 369 62.1
RcHm_v2.0_Chr5g0048501 Rosa chinensis HOM05D006712 ORTHO05D008219 6.3e-112 408.3 367 61.9
Thecc.09G272000 Theobroma cacao HOM05D006712 ORTHO05D008219 1.2e-110 404.1 368 62.8
FAN11G0164 Fragaria x ananassa HOM05D006712 ORTHO05D008219 1.6e-110 403.7 370 61.1
Duzib168G2384 Durio zibethinus HOM05D006712 ORTHO05D008219 2.2e-109 399.8 370 61.9
Lalb_Chr19g0136261 Lupinus albus HOM05D006712 ORTHO05D008219 9.4e-108 394.4 375 59.2
Gohir.A09G099400 Gossypium hirsutum HOM05D006712 ORTHO05D008219 4.7e-107 392.1 367 60.8
Dinv18839 Davidia involucrata HOM05D006712 ORTHO05D008219 6.1e-107 391.7 368 60.1
Potri.001G216500 Populus trichocarpa HOM05D006712 ORTHO05D008219 4.0e-106 389.0 368 60.6
Gorai.006G115800 Gossypium raimondii HOM05D006712 ORTHO05D008219 5.7e-105 385.2 383 58.2
Lalb_Chr03g0028431 Lupinus albus HOM05D006712 ORTHO05D008219 1.7e-104 383.6 374 60.2
Glyma.11G178255 Glycine max HOM05D006712 ORTHO05D008219 2.2e-104 383.3 373 59.2
Atru.chr3.3110 Acer truncatum HOM05D006712 ORTHO05D008219 3.7e-104 382.5 371 59.6
TWI31G0890 Tripterygium wilfordii HOM05D006712 ORTHO05D008219 6.3e-104 381.7 378 57.1
COL.COLO4_25432 Corchorus olitorius HOM05D006712 ORTHO05D008219 1.4e-103 380.6 371 60.9
Ciclev10028702m.g Citrus clementina HOM05D006712 ORTHO05D008219 1.8e-103 380.2 377 58.6
arahy.Tifrunner.gnm1.ann1.4CVW1F Arachis hypogaea HOM05D006712 ORTHO05D008219 3.1e-103 379.4 389 56.6
Lj1A268G10 Lonicera japonica HOM05D006712 ORTHO05D008219 5.4e-103 378.6 374 59.9
CSS0013127 Camellia sinensis var. sinensis HOM05D006712 ORTHO05D008219 7.7e-102 374.8 363 56.5
VMungo1127G0962 Vigna mungo HOM05D006712 ORTHO05D008219 3.8e-101 372.5 372 57.5
CsaV3_1G043820 Cucumis sativus L. HOM05D006712 ORTHO05D008219 6.6e-101 371.7 376 55.9
Hma1.2p1_0101F.1_g049480 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 8.6e-101 371.3 366 58.2
Manes.11G101400 Manihot esculenta HOM05D006712 ORTHO05D008219 8.6e-101 371.3 367 58.0
Glyma.12G094900 Glycine max HOM05D006712 ORTHO05D008219 1.2e-99 367.5 368 58.7
TAR623G0680 Trochodendron aralioides HOM05D006712 ORTHO05D008219 3.6e-99 365.9 366 59.0
MELO3C015061.2 Cucumis melo HOM05D006712 ORTHO05D008219 2.3e-98 363.2 376 55.6
Eucgr.B03815 Eucalyptus grandis HOM05D006712 ORTHO05D008219 5.2e-98 362.1 390 53.8
Phvul.011G099200 Phaseolus vulgaris HOM05D006712 ORTHO05D008219 6.8e-98 361.7 372 56.7
AL6G33100 Arabidopsis lyrata HOM05D006712 ORTHO05D008219 4.9e-96 355.5 366 54.1
Hund20948 Selenicereus undatus HOM05D006712 ORTHO05D008219 1.4e-95 354.0 381 55.1
Sed0013977 Sechium edule HOM05D006712 ORTHO05D008219 3.2e-95 352.8 372 54.6
PGSC0003DMG400005929 Solanum tuberosum HOM05D006712 ORTHO05D008219 3.2e-95 352.8 361 57.6
Lj3g0027754 Lotus japonicus HOM05D006712 ORTHO05D008219 5.4e-95 352.1 381 55.1
Sopen06g030560 Solanum pennellii HOM05D006712 ORTHO05D008219 5.4e-95 352.1 361 57.6
Nitab4.5_0008897g0020 Nicotiana tabacum HOM05D006712 ORTHO05D008219 1.6e-94 350.5 371 55.3
ClCG03G012180 Citrullus lanatus HOM05D006712 ORTHO05D008219 4.6e-94 349.0 417 50.8
Carub.0006s1976 Capsella rubella HOM05D006712 ORTHO05D008219 1.7e-93 347.1 368 54.6
arahy.Tifrunner.gnm1.ann1.UJS8TC Arachis hypogaea HOM05D006712 ORTHO05D008219 6.6e-93 345.1 400 52.2
CAN.G919.48 Capsicum annuum HOM05D006712 ORTHO05D008219 4.3e-92 342.4 365 55.6
THA.LOC104810933 Tarenaya hassleriana HOM05D006712 ORTHO05D008219 7.3e-92 341.7 375 53.3
Sp6g23080 Schrenkiella parvula HOM05D006712 ORTHO05D008219 2.1e-91 340.1 374 51.6
SalBow3G4582 Salvia bowleyana HOM05D006712 ORTHO05D008219 1.0e-90 337.8 378 54.0
Aa31LG1G13310 Aethionema arabicum HOM05D006712 ORTHO05D008219 3.1e-90 336.3 380 50.3
AT5G22120 Arabidopsis thaliana HOM05D006712 ORTHO05D008219 8.9e-90 334.7 369 52.3
AUR62020228 Chenopodium quinoa HOM05D006712 ORTHO05D008219 8.9e-90 334.7 371 53.1
DCAR_014052 Daucus carota HOM05D006712 ORTHO05D008219 8.9e-90 334.7 366 53.3
AUR62001554 Chenopodium quinoa HOM05D006712 ORTHO05D008219 1.5e-89 334.0 371 53.1
Rhsim13G0196500 Rhododendron simsii HOM05D006712 ORTHO05D008219 1.5e-89 334.0 454 45.8
Aqoxy1G00652 Aquilegia oxysepala HOM05D006712 ORTHO05D008219 4.4e-89 332.4 380 53.9
CARHR191410 Cardamine hirsuta HOM05D006712 ORTHO05D008219 7.5e-89 331.6 367 52.6
Sc21g0006790 Simmondsia chinensis HOM05D006712 ORTHO05D008219 9.8e-89 331.3 363 51.5
MSTRG.17680 Avicennia marina HOM05D006712 ORTHO05D008219 1.1e-87 327.8 373 52.3
A03p10600 Brassica napus HOM05D006712 ORTHO05D008219 2.7e-86 323.2 379 50.9
BcaB01g04741 Brassica carinata HOM05D006712 ORTHO05D008219 1.0e-85 321.2 384 51.3
C03p12200 Brassica napus HOM05D006712 ORTHO05D008219 1.3e-85 320.9 377 50.1
BraA03t10372Z Brassica rapa HOM05D006712 ORTHO05D008219 3.9e-85 319.3 380 50.0
BolC3t13693H Brassica oleracea HOM05D006712 ORTHO05D008219 5.0e-85 318.9 377 49.9
BcaC01g06601 Brassica carinata HOM05D006712 ORTHO05D008219 6.6e-85 318.5 377 49.6
EL10Ac7g16293 Beta vulgaris HOM05D006712 ORTHO05D008219 3.3e-84 316.2 397 50.1
Peaxi162Scf00098g00079 Petunia axillaris HOM05D006712 ORTHO05D008219 4.3e-84 315.8 358 52.5
Cc01_g07690 Coffea canephora HOM05D006712 ORTHO05D008219 5.6e-84 315.5 371 50.7
Nitab4.5_0000380g0060 Nicotiana tabacum HOM05D006712 ORTHO05D008219 2.1e-83 313.5 402 49.8
Gohir.D09G098800 Gossypium hirsutum HOM05D006712 ORTHO05D008219 3.6e-83 312.8 275 61.5
PSO339G1919 Papaver somniferum HOM05D006712 ORTHO05D008219 3.1e-82 309.7 374 51.1
PSO384G4991 Papaver somniferum HOM05D006712 ORTHO05D008219 4.0e-82 309.3 372 51.3
Oeu009041.1 Olea europaea HOM05D006712 ORTHO05D008219 2.2e-80 303.5 370 51.6
MD14G1087800 Malus domestica HOM05D006712 ORTHO05D008219 2.9e-80 303.1 229 67.7
FvH4_3g26410 Fragaria vesca HOM05D006712 ORTHO05D008219 3.2e-79 299.7 369 51.5
GSVIVG01037582001 Vitis vinifera HOM05D006712 ORTHO05D008219 2.1e-78 297.0 283 56.5
Ca_19473_v3 Cicer arietinum L. HOM05D006712 ORTHO05D008219 4.7e-75 285.8 374 50.0
Cpa.g.sc103.11 Carica papaya HOM05D006712 ORTHO05D008219 4.0e-74 282.7 320 52.5
GSVIVG01024643001 Vitis vinifera HOM05D006712 ORTHO05D008219 2.9e-72 276.6 283 54.4
Sabra16G0127200 Salix brachista HOM05D006712 ORTHO05D008219 3.2e-71 273.1 274 58.0
Zm00001eb282230 Zea mays HOM05D006712 ORTHO05D008219 3.9e-69 266.2 371 45.0
Actinidia24254 Actinidia chinensis HOM05D006712 ORTHO05D008219 1.2e-67 261.2 368 45.4
Hma1.2p1_0101F.1_g049490 Hydrangea macrophylla HOM05D006712 ORTHO05D008219 2.1e-67 260.4 232 62.1
Thhalv10013868m.g Eutrema salsugineum HOM05D006712 ORTHO05D008219 1.4e-66 257.7 344 44.8
unitig_27.g25124 Utricularia gibba HOM05D006712 ORTHO05D008219 4.4e-65 252.7 371 45.3
HPP92_002650 Vanilla planifolia HOM05D006712 ORTHO05D008219 4.4e-65 252.7 386 43.3
ECA238G0730 Erigeron canadensis HOM05D006712 ORTHO05D008219 2.2e-64 250.4 223 58.7
Migut.N02451 Erythranthe guttata HOM05D006712 ORTHO05D008219 2.2e-64 250.4 287 51.6
Medtr4g051518 Medicago truncatula HOM05D006712 ORTHO05D008219 1.1e-63 248.1 247 54.3
Actinidia07277 Actinidia chinensis HOM05D006712 ORTHO05D008219 1.2e-62 244.6 243 56.0
MBI17_g02433_MAGBIO Magnolia biondii HOM05D006712 ORTHO05D008219 1.3e-61 241.1 407 40.3
QL01p019587 Quercus lobata HOM05D006712 ORTHO05D008219 2.3e-61 240.4 145 83.4
SGA_v2.0_scaffold92G28138 Striga asiatica HOM05D006712 ORTHO05D008219 1.9e-60 237.3 334 46.1
vmacro03955 Vaccinium macrocarpon HOM05D006712 ORTHO05D008219 1.9e-60 237.3 481 39.3
QL01p019597 Quercus lobata HOM05D006712 ORTHO05D008219 4.3e-60 236.1 211 64.9
Psat7g204400 Pisum sativum HOM05D006712 ORTHO05D008219 7.3e-60 235.3 269 51.7
HanXRQChr04g0096771 Helianthus annuus HOM05D006712 ORTHO05D008219 1.8e-58 230.7 307 47.9
Ah.15g099020 Amaranthus hybridus HOM05D006712 ORTHO05D008219 1.2e-57 228.0 279 50.2
Lsat_1_v5_gn_2_34521 Lactuca sativa HOM05D006712 ORTHO05D008219 4.5e-57 226.1 263 50.6
TPR.G4637 Trifolium pratense HOM05D006712 ORTHO05D008219 2.9e-56 223.4 317 46.1
Nn6g34683 Nelumbo nucifera HOM05D006712 ORTHO05D008219 2.3e-53 213.8 395 42.3
Prupe.7G038700 Prunus persica HOM05D006712 ORTHO05D008219 5.6e-52 209.1 263 48.3
BcaB08g36451 Brassica carinata HOM05D002527 ORTHO05D008219 2.8e-51 206.8 249 48.6
CDE06G0581 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 8.1e-51 205.3 330 40.9
BcaC04g19542 Brassica carinata HOM05D006712 ORTHO05D008219 9.0e-50 201.8 231 50.2
Os01g0965600 Oryza sativa ssp. japonica HOM05D006712 ORTHO05D008219 3.4e-49 199.9 269 49.1
SHI25255 Sapria himalayana HOM05D000265 ORTHO05D000161 3.9e-45 186.4 225 46.2
SEGI_35195 Sequoiadendron giganteum HOM05D006712 ORTHO05D008219 5.6e-44 182.6 233 48.1
Mapoly0027s0100 Marchantia polymorpha HOM05D006712 ORTHO05D008219 5.8e-41 172.6 379 35.1
Thecc.09G272200 Theobroma cacao HOM05D006712 ORTHO05D008219 1.3e-40 171.4 140 65.7
Pp3c7_620 Physcomitrium patens HOM05D006712 ORTHO05D008219 1.9e-39 167.5 387 36.7
ATR0772G163 Amborella trichopoda HOM05D006712 ORTHO05D008219 1.8e-37 161.0 284 40.5
SMO119G0218 Selaginella moellendorffii HOM05D006712 ORTHO05D008219 9.6e-36 155.2 384 34.4
BraA10t43946Z Brassica rapa HOM05D006712 ORTHO05D008219 6.7e-29 132.5 203 43.8
C09p54580 Brassica napus HOM05D006712 ORTHO05D008219 1.2e-25 121.7 153 48.4
BolC9t58325H Brassica oleracea HOM05D006712 ORTHO05D008219 1.2e-25 121.7 153 48.4
A10p18660 Brassica napus HOM05D002527 ORTHO05D002865 4.5e-25 119.8 190 42.6
AagrBONN_evm.TU.Sc2ySwM_117.1746 Anthoceros agrestis HOM05D006712 ORTHO05D008219 3.8e-24 116.7 234 37.2
BcaC04g19541 Brassica carinata HOM05D002527 ORTHO05D002865 1.6e-22 111.3 113 54.9
CBR_g40336 Chara braunii HOM05D006712 ORTHO05D008219 3.1e-18 97.1 234 32.1
Medtr4g051435 Medicago truncatula HOM05D000445 ORTHO05D000314 5.3e-18 96.3 98 52.0
ATR0772G219 Amborella trichopoda HOM05D006712 ORTHO05D008219 2.0e-17 94.4 93 55.9
FAN21G2251 Fragaria x ananassa HOM05D006712 ORTHO05D008219 7.7e-17 92.4 63 73.0
Sabra16G0127300 Salix brachista HOM05D006712 ORTHO05D008219 5.0e-16 89.7 99 54.5
Duzib170G0178 Durio zibethinus HOM05D006712 ORTHO05D008219 2.1e-14 84.3 92 46.7
CDE07G1644 Ceratophyllum demersum HOM05D006712 ORTHO05D008219 3.5e-09 67.0 63 58.7
BcaC01g06603 Brassica carinata HOM05D006712 ORTHO05D008219 5.0e-08 63.2 76 51.3
C09p54560 Brassica napus HOM05D000021 ORTHO05D000010 3.2e-07 60.5 51 56.9
BolC9t58324H Brassica oleracea HOM05D000021 ORTHO05D000010 3.2e-07 60.5 51 56.9


User provided reference genes

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