Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010153 Carpinus fangiana HOM05D004862 ORTHO05D005841 1.2e-32 142.5 70 100.0
Cfa010154 Carpinus fangiana HOM05D004862 ORTHO05D005841 2.7e-32 141.4 70 98.6
Haze_23539 Corylus avellana HOM05D004862 ORTHO05D005841 1.7e-29 132.1 70 90.0
QL01p020593 Quercus lobata HOM05D004862 ORTHO05D005841 3.0e-23 111.3 69 79.7
CiPaw.13G145700 Carya illinoinensis HOM05D004862 ORTHO05D005841 3.9e-23 110.9 70 80.0
MELO3C012691.2 Cucumis melo HOM05D004862 ORTHO05D005841 1.7e-21 105.5 70 74.3
RcHm_v2.0_Chr3g0454151 Rosa chinensis HOM05D004862 ORTHO05D005841 1.7e-21 105.5 70 71.4
FAN14G4788 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.2e-21 105.1 70 72.9
CANSAT54G0577 Cannabis sativa HOM05D004862 ORTHO05D005841 2.8e-21 104.8 70 74.3
FvH4_6g05370 Fragaria vesca HOM05D004862 ORTHO05D005841 3.7e-21 104.4 70 71.4
FAN05G4126 Fragaria x ananassa HOM05D004862 ORTHO05D005841 3.7e-21 104.4 70 70.0
Ciclev10015108m.g Citrus clementina HOM05D004862 ORTHO05D005841 4.8e-21 104.0 70 74.3
ClCG09G014610 Citrullus lanatus HOM05D004862 ORTHO05D005841 6.3e-21 103.6 69 68.1
FAN14G5837 Fragaria x ananassa HOM05D004862 ORTHO05D005841 8.2e-21 103.2 70 71.4
Manes.14G165200 Manihot esculenta HOM05D004862 ORTHO05D005841 8.2e-21 103.2 70 72.9
Cc02_g18820 Coffea canephora HOM05D004862 ORTHO05D005841 1.4e-20 102.4 70 71.4
Dinv24234 Davidia involucrata HOM05D004862 ORTHO05D005841 1.4e-20 102.4 70 70.0
FAN02G3155 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.4e-20 102.4 70 68.6
FAN05G4337 Fragaria x ananassa HOM05D004862 ORTHO05D005841 1.4e-20 102.4 70 68.6
MD12G1223100 Malus domestica HOM05D004862 ORTHO05D005841 2.4e-20 101.7 70 72.9
Prupe.6G329700 Prunus persica HOM05D004862 ORTHO05D005841 3.1e-20 101.3 71 73.2
Atru.chr6.1121 Acer truncatum HOM05D004862 ORTHO05D005841 9.1e-20 99.8 70 70.0
DCAR_021834 Daucus carota HOM05D004862 ORTHO05D005841 9.1e-20 99.8 70 67.1
arahy.Tifrunner.gnm1.ann1.34Q84K Arachis hypogaea HOM05D004862 ORTHO05D005841 1.2e-19 99.4 70 68.6
arahy.Tifrunner.gnm1.ann1.WE1E8S Arachis hypogaea HOM05D004862 ORTHO05D005841 1.2e-19 99.4 70 68.6
CAN.G1.65 Capsicum annuum HOM05D004862 ORTHO05D005841 1.5e-19 99.0 70 71.4
Glyma.08G075600 Glycine max HOM05D004862 ORTHO05D005841 1.5e-19 99.0 70 71.4
Lalb_Chr07g0189371 Lupinus albus HOM05D004862 ORTHO05D005841 1.5e-19 99.0 70 67.1
Thhalv10004120m.g Eutrema salsugineum HOM05D004862 ORTHO05D005841 2.0e-19 98.6 70 65.7
FAN09G3019 Fragaria x ananassa HOM05D004862 ORTHO05D005841 2.0e-19 98.6 70 70.0
Glyma.05G121000 Glycine max HOM05D004862 ORTHO05D005841 2.0e-19 98.6 70 71.4
PGR042G3925 Punica granatum HOM05D004862 ORTHO05D005841 2.0e-19 98.6 70 71.4
COL.COLO4_33088 Corchorus olitorius HOM05D004862 ORTHO05D005841 2.6e-19 98.2 70 70.0
Eucgr.G00660 Eucalyptus grandis HOM05D004862 ORTHO05D005841 2.6e-19 98.2 70 70.0
Lj4g0019477 Lotus japonicus HOM05D004862 ORTHO05D005841 2.6e-19 98.2 70 70.0
CARHR147430 Cardamine hirsuta HOM05D004862 ORTHO05D005841 4.5e-19 97.4 70 65.7
Phvul.002G205600 Phaseolus vulgaris HOM05D004862 ORTHO05D005841 4.5e-19 97.4 70 70.0
Sed0027136 Sechium edule HOM05D004862 ORTHO05D005841 5.9e-19 97.1 70 68.6
Solyc10g047120.2 Solanum lycopersicum HOM05D004862 ORTHO05D005841 7.7e-19 96.7 70 65.7
Sopen10g017280 Solanum pennellii HOM05D004862 ORTHO05D005841 7.7e-19 96.7 70 65.7
AT3G26410 Arabidopsis thaliana HOM05D004862 ORTHO05D005841 1.0e-18 96.3 70 62.9
BcaC03g17340 Brassica carinata HOM05D004862 ORTHO05D005841 1.0e-18 96.3 70 62.9
BcaC03g17366 Brassica carinata HOM05D004862 ORTHO05D005841 1.0e-18 96.3 70 62.9
C02p52870 Brassica napus HOM05D004862 ORTHO05D005841 1.0e-18 96.3 70 62.9
C02p53050 Brassica napus HOM05D004862 ORTHO05D005841 1.0e-18 96.3 70 62.9
BolC2t11366H Brassica oleracea HOM05D004862 ORTHO05D005841 1.0e-18 96.3 70 62.9
BolC2t11381H Brassica oleracea HOM05D004862 ORTHO05D005841 1.0e-18 96.3 70 62.9
Gohir.A01G012300 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.0e-18 96.3 70 70.0
Sp2g15560 Schrenkiella parvula HOM05D004862 ORTHO05D005841 1.3e-18 95.9 70 64.3
EL10Ac4g08938 Beta vulgaris HOM05D004862 ORTHO05D005841 1.7e-18 95.5 71 62.0
CSS0014529 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.7e-18 95.5 70 67.1
CSS0027197 Camellia sinensis var. sinensis HOM05D004862 ORTHO05D005841 1.7e-18 95.5 70 67.1
BraA02t08465Z Brassica rapa HOM05D004862 ORTHO05D005841 2.2e-18 95.1 70 65.7
Ca_25384_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.2e-18 95.1 70 68.6
Ca_29817_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.2e-18 95.1 70 68.6
Ca_29818_v3 Cicer arietinum L. HOM05D004862 ORTHO05D005841 2.2e-18 95.1 70 68.6
TAR628G0283 Trochodendron aralioides HOM05D004862 ORTHO05D005841 2.2e-18 95.1 70 65.7
Cpa.g.sc845.1 Carica papaya HOM05D004862 ORTHO05D005841 2.9e-18 94.7 70 67.1
MBI06_g20970_MAGBIO Magnolia biondii HOM05D004862 ORTHO05D005841 2.9e-18 94.7 70 64.3
Thecc.02G156500 Theobroma cacao HOM05D004862 ORTHO05D005841 2.9e-18 94.7 70 70.0
VMungo0251G1232 Vigna mungo HOM05D004862 ORTHO05D005841 2.9e-18 94.7 70 67.1
C02p53070 Brassica napus HOM05D004862 ORTHO05D005841 3.8e-18 94.4 70 61.4
Hund06875 Selenicereus undatus HOM05D004862 ORTHO05D005841 3.8e-18 94.4 70 65.7
PGSC0003DMG400017691 Solanum tuberosum HOM05D004862 ORTHO05D005841 3.8e-18 94.4 70 64.3
TWI23G0249 Tripterygium wilfordii HOM05D004862 ORTHO05D005841 3.8e-18 94.4 70 61.4
Duzib132G0210 Durio zibethinus HOM05D004862 ORTHO05D005841 5.0e-18 94.0 70 68.6
Aa31LG2G6120 Aethionema arabicum HOM05D004862 ORTHO05D005841 6.5e-18 93.6 70 62.9
AL5G15180 Arabidopsis lyrata HOM05D004862 ORTHO05D005841 6.5e-18 93.6 70 62.9
A02p34570 Brassica napus HOM05D004862 ORTHO05D005841 6.5e-18 93.6 70 65.7
Carub.0005s0438 Capsella rubella HOM05D004862 ORTHO05D005841 6.5e-18 93.6 70 62.9
Peaxi162Scf00003g03739 Petunia axillaris HOM05D004862 ORTHO05D005841 6.5e-18 93.6 70 70.0
SalBow5G3806 Salvia bowleyana HOM05D004862 ORTHO05D005841 6.5e-18 93.6 70 65.7
SalBow5G4932 Salvia bowleyana HOM05D004862 ORTHO05D005841 6.5e-18 93.6 70 65.7
Psat7g096360 Pisum sativum HOM05D004862 ORTHO05D005841 8.5e-18 93.2 70 67.1
BcaNung06886 Brassica carinata HOM05D004862 ORTHO05D005841 1.4e-17 92.4 70 62.9
C07p35450 Brassica napus HOM05D004862 ORTHO05D005841 1.4e-17 92.4 70 62.9
BolC7t44069H Brassica oleracea HOM05D004862 ORTHO05D005841 1.4e-17 92.4 70 62.9
ECA240G2004 Erigeron canadensis HOM05D004862 ORTHO05D005841 1.4e-17 92.4 70 65.7
Nn1g06191 Nelumbo nucifera HOM05D004862 ORTHO05D005841 1.4e-17 92.4 70 62.9
vmacro01803 Vaccinium macrocarpon HOM05D004862 ORTHO05D005841 1.4e-17 92.4 70 67.1
Nitab4.5_0000078g0200 Nicotiana tabacum HOM05D004862 ORTHO05D005841 1.9e-17 92.0 70 67.1
Nitab4.5_0005079g0020 Nicotiana tabacum HOM05D004862 ORTHO05D005841 1.9e-17 92.0 70 65.7
AUR62003397 Chenopodium quinoa HOM05D004862 ORTHO05D005841 2.5e-17 91.7 71 62.0
Oeu000228.1 Olea europaea HOM05D004862 ORTHO05D005841 2.5e-17 91.7 70 62.9
Rhsim11G0133700 Rhododendron simsii HOM05D004862 ORTHO05D005841 2.5e-17 91.7 70 65.7
Sc09g0004450 Simmondsia chinensis HOM05D004862 ORTHO05D005841 2.5e-17 91.7 70 62.9
TAR116G0002 Trochodendron aralioides HOM05D004862 ORTHO05D005841 2.5e-17 91.7 70 65.7
Migut.B00646 Erythranthe guttata HOM05D004862 ORTHO05D005841 3.2e-17 91.3 70 64.3
A06p42030 Brassica napus HOM05D004862 ORTHO05D005841 4.2e-17 90.9 70 60.0
BraA06t27120Z Brassica rapa HOM05D004862 ORTHO05D005841 4.2e-17 90.9 70 60.0
Sabra01G0160300 Salix brachista HOM05D004862 ORTHO05D005841 4.2e-17 90.9 70 65.7
AUR62004780 Chenopodium quinoa HOM05D004862 ORTHO05D005841 5.5e-17 90.5 71 60.6
Lsat_1_v5_gn_9_117961 Lactuca sativa HOM05D004862 ORTHO05D005841 7.2e-17 90.1 72 63.9
Gorai.013G068500 Gossypium raimondii HOM05D004862 ORTHO05D005841 9.4e-17 89.7 71 67.6
Ah.04g163010 Amaranthus hybridus HOM05D004862 ORTHO05D005841 1.2e-16 89.4 70 61.4
unitig_26.g9586 Utricularia gibba HOM05D004862 ORTHO05D005841 1.6e-16 89.0 70 65.7
CsaV3_7G022230 Cucumis sativus L. HOM05D004862 ORTHO05D005841 2.7e-16 88.2 57 77.2
Gorai.002G015300 Gossypium raimondii HOM05D004862 ORTHO05D005841 2.7e-16 88.2 70 65.7
Lj5A244T54 Lonicera japonica HOM05D004862 ORTHO05D005841 3.6e-16 87.8 70 58.6
Medtr4g094315 Medicago truncatula HOM05D004862 ORTHO05D005841 3.6e-16 87.8 70 64.3
BcaB07g30229 Brassica carinata HOM05D004862 ORTHO05D005841 4.7e-16 87.4 70 60.0
Gohir.D13G060400 Gossypium hirsutum HOM05D004862 ORTHO05D005841 4.7e-16 87.4 71 66.2
HanXRQChr03g0065771 Helianthus annuus HOM05D004862 ORTHO05D005841 6.1e-16 87.0 70 60.0
CDE02G2941 Ceratophyllum demersum HOM05D004862 ORTHO05D005841 8.0e-16 86.7 70 62.9
SGA_v2.0_scaffold332G48937 Striga asiatica HOM05D004862 ORTHO05D005841 8.0e-16 86.7 70 65.7
Potri.001G207000 Populus trichocarpa HOM05D004862 ORTHO05D005841 1.8e-15 85.5 70 60.0
Lj9A317G73 Lonicera japonica HOM05D004862 ORTHO05D005841 3.0e-15 84.7 70 60.0
Aqoxy6G00342 Aquilegia oxysepala HOM05D004862 ORTHO05D005841 3.9e-15 84.3 70 61.4
Os02g0556400 Oryza sativa ssp. japonica HOM05D004862 ORTHO05D005841 5.2e-15 84.0 72 59.7
PSO675G5038 Papaver somniferum HOM05D004862 ORTHO05D005841 8.8e-15 83.2 70 58.6
THA.LOC104818254 Tarenaya hassleriana HOM05D004862 ORTHO05D005841 1.1e-14 82.8 70 62.9
Zm00001eb243830 Zea mays HOM05D004862 ORTHO05D005841 1.1e-14 82.8 70 58.6
PSO541G6054 Papaver somniferum HOM05D004862 ORTHO05D005841 2.0e-14 82.0 70 57.1
ATR1136G066 Amborella trichopoda HOM05D004862 ORTHO05D005841 1.7e-13 79.0 70 55.7
MSTRG.16558 Avicennia marina HOM05D004862 ORTHO05D005841 6.3e-13 77.0 73 57.5
Gohir.D01G013500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.4e-12 75.9 43 79.1
Ciclev10008412m.g Citrus clementina HOM05D004862 ORTHO05D005841 2.9e-10 68.2 37 83.8
Gohir.A13G061500 Gossypium hirsutum HOM05D004862 ORTHO05D005841 1.5e-09 65.9 48 66.7
SHI16537 Sapria himalayana HOM05D004862 ORTHO05D005841 1.9e-09 65.5 70 48.6
SEGI_00112 Sequoiadendron giganteum HOM05D004862 ORTHO05D005841 7.2e-09 63.5 77 48.1
Mapoly0006s0193 Marchantia polymorpha HOM05D004862 ORTHO05D005841 8.8e-07 56.6 74 44.6


User provided reference genes

Program Settings