Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010152 Carpinus fangiana HOM05D019813 ORTHO05D000630 4.1e-171 604.7 329 100.0
Haze_23538 Corylus avellana HOM05D019813 ORTHO05D000630 3.4e-109 399.1 305 76.1
QL01p020579 Quercus lobata HOM05D008543 ORTHO05D000630 2.8e-39 166.8 442 33.7
CiPaw.13G145600 Carya illinoinensis HOM05D019813 ORTHO05D000630 1.5e-35 154.5 382 33.0
Cfa010150 Carpinus fangiana HOM05D019813 ORTHO05D000630 7.0e-22 109.0 350 35.1
GSVIVG01014844001 Vitis vinifera HOM05D000174 ORTHO05D000630 2.0e-21 107.5 416 29.3
Actinidia03675 Actinidia chinensis HOM05D000174 ORTHO05D000630 4.7e-18 96.3 285 34.7
Dinv40916 Davidia involucrata HOM05D008543 ORTHO05D000630 6.2e-18 95.9 463 27.9
Cc05_g15710 Coffea canephora HOM05D000174 ORTHO05D000630 1.1e-17 95.1 330 27.6
THA.LOC104817725 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 1.2e-16 91.7 254 28.7
Nitab4.5_0000152g0060 Nicotiana tabacum HOM05D008543 ORTHO05D000630 7.5e-16 89.0 419 26.0
CiPaw.14G107600 Carya illinoinensis HOM05D019813 ORTHO05D000630 3.7e-15 86.7 387 26.4
AL8G31830 Arabidopsis lyrata HOM05D000174 ORTHO05D000630 8.3e-15 85.5 312 26.0
TWI75G0649 Tripterygium wilfordii HOM05D008543 ORTHO05D000630 8.3e-15 85.5 299 23.4
Glyma.13G073300 Glycine max HOM05D022580 ORTHO05D000630 2.4e-14 84.0 456 24.8
CANSAT54G2384 Cannabis sativa HOM05D008543 ORTHO05D000630 7.0e-14 82.4 255 29.8
Glyma.20G047500 Glycine max HOM05D022580 ORTHO05D000630 7.0e-14 82.4 398 24.1
Oeu052027.2 Olea europaea HOM05D000784 ORTHO05D000116 7.0e-14 82.4 287 28.2
Nitab4.5_0009408g0010 Nicotiana tabacum HOM05D008543 ORTHO05D000630 1.2e-13 81.6 383 25.1
Oeu052885.1 Olea europaea HOM05D008543 ORTHO05D000630 1.6e-13 81.3 368 26.6
THA.LOC104811702 Tarenaya hassleriana HOM05D000174 ORTHO05D000630 1.6e-13 81.3 274 27.4
PGSC0003DMG400022147 Solanum tuberosum HOM05D008543 ORTHO05D000630 2.1e-13 80.9 366 26.8
Carub.0008s1652 Capsella rubella HOM05D000174 ORTHO05D000630 2.7e-13 80.5 291 26.1
VMungo0540G2495 Vigna mungo HOM05D022580 ORTHO05D000630 4.6e-13 79.7 436 23.4
CARHR269600 Cardamine hirsuta HOM05D000174 ORTHO05D000630 6.0e-13 79.3 271 27.3
PGR119G0147 Punica granatum HOM05D000174 ORTHO05D000630 6.0e-13 79.3 294 25.9
Peaxi162Scf00232g00062 Petunia axillaris HOM05D008543 ORTHO05D000630 1.3e-12 78.2 289 29.4
Lalb_Chr15g0080221 Lupinus albus HOM05D008543 ORTHO05D000630 3.0e-12 77.0 416 25.7
Lj6g0021794 Lotus japonicus HOM05D000085 ORTHO05D015977 3.9e-12 76.6 385 23.1
Phvul.006G020000 Phaseolus vulgaris HOM05D022580 ORTHO05D000630 6.6e-12 75.9 453 24.5
Rhsim06G0235100 Rhododendron simsii HOM05D000174 ORTHO05D000630 8.6e-12 75.5 465 23.0
QL07p014639 Quercus lobata HOM05D008543 ORTHO05D000630 1.9e-11 74.3 356 25.0
Actinidia23303 Actinidia chinensis HOM05D000174 ORTHO05D000630 2.5e-11 73.9 197 31.5
CSS0016853 Camellia sinensis var. sinensis HOM05D000174 ORTHO05D000630 2.5e-11 73.9 164 34.1
CSS0041839 Camellia sinensis var. sinensis HOM05D008543 ORTHO05D000630 2.5e-11 73.9 164 34.1
Actinidia30352 Actinidia chinensis HOM05D008543 ORTHO05D000630 5.6e-11 72.8 419 24.8
CiPaw.13G145500 Carya illinoinensis HOM05D008543 ORTHO05D000630 5.6e-11 72.8 445 25.4
Lj1C901G3 Lonicera japonica HOM05D000174 ORTHO05D000630 5.6e-11 72.8 307 32.9
Oeu006263.1 Olea europaea HOM05D008543 ORTHO05D000630 2.8e-10 70.5 452 25.7
arahy.Tifrunner.gnm1.ann1.YK7I6N Arachis hypogaea HOM05D008543 ORTHO05D000630 3.6e-10 70.1 292 26.0
Gohir.D08G019750 Gossypium hirsutum HOM05D008543 ORTHO05D000630 4.7e-10 69.7 159 32.1
Gorai.004G014300 Gossypium raimondii HOM05D008543 ORTHO05D000630 4.7e-10 69.7 159 32.1
MD11G1046000 Malus domestica HOM05D000174 ORTHO05D000630 4.7e-10 69.7 209 31.1
Prupe.6G035400 Prunus persica HOM05D000174 ORTHO05D000630 4.7e-10 69.7 233 27.0
C02p15430 Brassica napus HOM05D000174 ORTHO05D000630 6.2e-10 69.3 277 29.6
BolC2t07657H Brassica oleracea HOM05D000174 ORTHO05D000630 6.2e-10 69.3 277 29.6
Manes.01G176050 Manihot esculenta HOM05D049795 ORTHO05D000630 6.2e-10 69.3 307 26.1
Gohir.A08G009700 Gossypium hirsutum HOM05D008543 ORTHO05D000630 8.1e-10 68.9 158 31.0
CAN.G623.74 Capsicum annuum HOM05D008543 ORTHO05D000630 1.1e-09 68.6 246 28.9
Sopen07g034340 Solanum pennellii HOM05D011325 ORTHO05D000630 1.8e-09 67.8 324 30.2
arahy.Tifrunner.gnm1.ann1.1FA9DV Arachis hypogaea HOM05D008543 ORTHO05D000630 2.3e-09 67.4 349 26.6
Potri.001G224600 Populus trichocarpa HOM05D008543 ORTHO05D000630 2.3e-09 67.4 281 26.0
A10p13430 Brassica napus HOM05D000174 ORTHO05D000630 3.1e-09 67.0 269 24.2
BraA10t43446Z Brassica rapa HOM05D000174 ORTHO05D000630 3.1e-09 67.0 269 24.2
Cpa.g.sc12.67 Carica papaya HOM05D000174 ORTHO05D000630 3.1e-09 67.0 332 23.8
MD11G1124800 Malus domestica HOM05D025829 ORTHO05D000630 3.1e-09 67.0 196 30.1
Duzib170G0186 Durio zibethinus HOM05D008543 ORTHO05D000630 4.0e-09 66.6 220 28.6
Thhalv10015446m.g Eutrema salsugineum HOM05D000174 ORTHO05D000630 4.0e-09 66.6 283 24.0
LjContig00564g0020168 Lotus japonicus HOM05D025675 ORTHO05D000630 5.2e-09 66.2 404 26.5
Solyc07g066160.1 Solanum lycopersicum HOM05D011325 ORTHO05D000630 5.2e-09 66.2 324 30.2
BcaC04g20137 Brassica carinata HOM05D000174 ORTHO05D000630 6.8e-09 65.9 276 23.9
BolC9t57599H Brassica oleracea HOM05D000174 ORTHO05D000630 6.8e-09 65.9 276 23.9
Sc16g0010820 Simmondsia chinensis HOM05D008543 ORTHO05D000630 6.8e-09 65.9 385 24.4
Sp6g18050 Schrenkiella parvula HOM05D000174 ORTHO05D000630 8.9e-09 65.5 234 24.8
Cpa.g.sc12.65 Carica papaya HOM05D000174 ORTHO05D000630 1.5e-08 64.7 291 28.5
HanXRQChr13g0409261 Helianthus annuus HOM05D000174 ORTHO05D000630 1.5e-08 64.7 279 26.5
Thecc.01G159400 Theobroma cacao HOM05D067391 ORTHO05D044764 1.5e-08 64.7 259 32.0
BcaC03g14238 Brassica carinata HOM05D000174 ORTHO05D000630 2.0e-08 64.3 277 30.0
Oeu032035.1 Olea europaea HOM05D011325 ORTHO05D000630 2.0e-08 64.3 274 26.3
HanXRQChr03g0079361 Helianthus annuus HOM05D000174 ORTHO05D000630 5.8e-08 62.8 285 26.0
Prupe.6G093500 Prunus persica HOM05D025829 ORTHO05D000630 5.8e-08 62.8 180 29.4
DCAR_017611 Daucus carota HOM05D000174 ORTHO05D000630 7.5e-08 62.4 168 29.2
MBI14_g12738_MAGBIO Magnolia biondii HOM05D000174 ORTHO05D000630 7.5e-08 62.4 260 27.3
MD03G1043000 Malus domestica HOM05D000174 ORTHO05D000630 7.5e-08 62.4 209 28.7
TPR.G11948 Trifolium pratense HOM05D008543 ORTHO05D000630 7.5e-08 62.4 307 26.4
C03p16000 Brassica napus HOM05D000174 ORTHO05D000630 9.9e-08 62.0 233 32.2
BolC3t14028H Brassica oleracea HOM05D000174 ORTHO05D000630 1.3e-07 61.6 233 30.9
CDE06G2287 Ceratophyllum demersum HOM05D056667 ORTHO05D000630 1.3e-07 61.6 322 27.6
C09p47440 Brassica napus HOM05D000174 ORTHO05D000630 1.7e-07 61.2 278 22.7
QL08p000516 Quercus lobata HOM05D000174 ORTHO05D000630 1.7e-07 61.2 211 29.4
AT5G56200 Arabidopsis thaliana HOM05D000174 ORTHO05D000630 2.2e-07 60.8 333 21.6
BraA02t05992Z Brassica rapa HOM05D000174 ORTHO05D000630 2.9e-07 60.5 233 32.2
Psat1g077000 Pisum sativum HOM05D008543 ORTHO05D000630 2.9e-07 60.5 302 24.2
TAR636G0894 Trochodendron aralioides HOM05D008543 ORTHO05D000630 2.9e-07 60.5 160 26.2
Lalb_Chr17g0347691 Lupinus albus HOM05D008543 ORTHO05D000630 3.7e-07 60.1 185 25.4
PGR031G1920 Punica granatum HOM05D000174 ORTHO05D000630 4.9e-07 59.7 314 30.3
FAN25G3117 Fragaria x ananassa HOM05D000174 ORTHO05D000630 8.3e-07 58.9 338 23.7
PGSC0003DMG400034376 Solanum tuberosum HOM05D000174 ORTHO05D000630 8.3e-07 58.9 335 23.0
BcaC01g06408 Brassica carinata HOM05D000174 ORTHO05D000630 1.1e-06 58.5 233 32.2
Eucgr.F03645 Eucalyptus grandis HOM05D008543 ORTHO05D000630 1.1e-06 58.5 380 21.6
FvH4_3g41600 Fragaria vesca HOM05D000174 ORTHO05D000630 1.1e-06 58.5 160 28.1
FAN11G0349 Fragaria x ananassa HOM05D000174 ORTHO05D000630 1.1e-06 58.5 160 28.1
FAN21G0599 Fragaria x ananassa HOM05D000174 ORTHO05D000630 1.1e-06 58.5 160 28.1
MD03G1110900 Malus domestica HOM05D025829 ORTHO05D000630 1.1e-06 58.5 313 25.2
SGA_v2.0_scaffold79G25561 Striga asiatica HOM05D011325 ORTHO05D000630 1.1e-06 58.5 294 31.3
Cfa010151 Carpinus fangiana HOM05D019813 ORTHO05D000630 1.9e-06 57.8 66 53.0
Cc01_g06930 Coffea canephora HOM05D000174 ORTHO05D000630 1.9e-06 57.8 285 25.3
FAN16G0761 Fragaria x ananassa HOM05D000174 ORTHO05D000630 2.4e-06 57.4 160 29.4
Nn1g07631 Nelumbo nucifera HOM05D000174 ORTHO05D000630 2.4e-06 57.4 327 24.8
Nn1g07630 Nelumbo nucifera HOM05D000174 ORTHO05D000630 3.2e-06 57.0 209 27.3
Sabra16G0133300 Salix brachista HOM05D008543 ORTHO05D000630 3.2e-06 57.0 268 24.3
BcaB05g22249 Brassica carinata HOM05D000174 ORTHO05D000630 4.1e-06 56.6 257 26.8
BcaB08g35982 Brassica carinata HOM05D000174 ORTHO05D000630 4.1e-06 56.6 327 24.2
CSS0027051 Camellia sinensis var. sinensis HOM05D001867 ORTHO05D001708 4.1e-06 56.6 218 24.8
Duzib168G2176 Durio zibethinus HOM05D008543 ORTHO05D000630 4.1e-06 56.6 205 24.9
Nitab4.5_0003570g0030 Nicotiana tabacum HOM05D008543 ORTHO05D000630 4.1e-06 56.6 185 27.6
Thecc.09G250700 Theobroma cacao HOM05D008543 ORTHO05D000630 4.1e-06 56.6 215 26.0
SGA_v2.0_scaffold7G03548 Striga asiatica HOM05D008543 ORTHO05D000630 5.4e-06 56.2 212 25.5
Peaxi162Scf00234g00042 Petunia axillaris HOM05D000174 ORTHO05D000630 9.2e-06 55.5 344 21.5


User provided reference genes

Program Settings