Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010131 Carpinus fangiana HOM05D005304 ORTHO05D004438 8.7e-57 223.8 146 100.0
Haze_23519 Corylus avellana HOM05D005304 ORTHO05D004438 9.7e-40 167.2 150 80.7
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 7.7e-21 104.4 140 45.7
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 1.7e-20 103.2 145 46.2
CiPaw.14G106000 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.8e-14 83.2 150 40.7
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.0e-09 67.4 61 55.7
Ciclev10029845m.g Citrus clementina HOM05D005304 ORTHO05D004438 1.8e-09 66.6 63 55.6
Potri.009G003400 Populus trichocarpa HOM05D005304 ORTHO05D004438 3.0e-09 65.9 63 55.6
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 4.0e-09 65.5 63 54.0
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 5.2e-09 65.1 63 52.4
PGR119G0321 Punica granatum HOM05D005304 ORTHO05D004438 6.7e-09 64.7 63 58.7
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 8.8e-09 64.3 63 54.0
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 2.0e-08 63.2 62 48.4
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 2.6e-08 62.8 62 51.6
CSS0028161 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 3.3e-08 62.4 58 51.7
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 4.4e-08 62.0 63 55.6
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 9.7e-08 60.8 67 55.2
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 1.7e-07 60.1 58 53.4
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.8e-07 59.3 130 38.5
RcHm_v2.0_Chr5g0056381 Rosa chinensis HOM05D025255 ORTHO05D004438 2.8e-07 59.3 64 53.1
Eucgr.J00398 Eucalyptus grandis HOM05D005304 ORTHO05D004438 3.7e-07 58.9 152 34.2
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 3.7e-07 58.9 60 53.3
FAN11G2118 Fragaria x ananassa HOM05D025255 ORTHO05D004438 6.3e-07 58.2 61 54.1
Gohir.A07G105600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.3e-07 58.2 68 51.5
FAN16G1536 Fragaria x ananassa HOM05D025255 ORTHO05D004438 8.2e-07 57.8 61 52.5
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 8.2e-07 57.8 129 38.0
Manes.04G012000 Manihot esculenta HOM05D005304 ORTHO05D004438 8.2e-07 57.8 151 30.5
TWI79G0532 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 1.1e-06 57.4 118 33.9
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 1.4e-06 57.0 52 57.7
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.4e-06 56.2 68 50.0
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 4.1e-06 55.5 46 56.5
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 7.0e-06 54.7 63 52.4
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 7.0e-06 54.7 59 54.2


User provided reference genes

Program Settings