Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010093 Carpinus fangiana HOM05D000236 ORTHO05D000192 3.6e-135 485.0 254 100.0
Cfa010095 Carpinus fangiana HOM05D000236 ORTHO05D000192 1.1e-59 234.2 254 61.4
Cfa010358 Carpinus fangiana HOM05D000236 ORTHO05D000192 3.5e-37 159.5 310 42.6
Cfa010090 Carpinus fangiana HOM05D000236 ORTHO05D034194 2.6e-24 116.7 221 43.9
Haze_23462 Corylus avellana HOM05D000236 ORTHO05D034194 4.4e-24 115.9 303 36.0
CiPaw.13G141600 Carya illinoinensis HOM05D000236 ORTHO05D000192 6.9e-17 92.0 257 33.5
Sabra04G0128700 Salix brachista HOM05D000236 ORTHO05D000192 3.0e-12 76.6 273 31.9
Dinv12529 Davidia involucrata HOM05D000236 ORTHO05D000192 1.5e-11 74.3 198 34.8
Nn6g35078 Nelumbo nucifera HOM05D000236 ORTHO05D000192 1.5e-11 74.3 254 29.5
Gohir.D04G105100 Gossypium hirsutum HOM05D000236 ORTHO05D000192 2.5e-11 73.6 186 36.0
QL01p013935 Quercus lobata HOM05D000236 ORTHO05D000192 4.3e-11 72.8 236 30.9
Potri.009G150000 Populus trichocarpa HOM05D000236 ORTHO05D000192 5.6e-11 72.4 261 31.8
TAR623G0244 Trochodendron aralioides HOM05D000236 ORTHO05D000192 5.6e-11 72.4 250 33.2
Potri.004G189200 Populus trichocarpa HOM05D000236 ORTHO05D000192 7.4e-11 72.0 194 36.6
Gorai.009G408800 Gossypium raimondii HOM05D000236 ORTHO05D000192 9.6e-11 71.6 193 35.2
SGA_v2.0_scaffold35G14104 Striga asiatica HOM05D000236 ORTHO05D000192 1.6e-10 70.9 130 42.3
Manes.11G156100 Manihot esculenta HOM05D000236 ORTHO05D000192 2.8e-10 70.1 244 31.1
Sabra09G0118700 Salix brachista HOM05D000236 ORTHO05D000192 2.8e-10 70.1 200 36.5
Duzib106G0801 Durio zibethinus HOM05D000236 ORTHO05D000192 3.6e-10 69.7 204 32.8
Migut.L01748 Erythranthe guttata HOM05D000236 ORTHO05D000192 3.6e-10 69.7 205 32.2
Nn2g13970 Nelumbo nucifera HOM05D000236 ORTHO05D000192 4.8e-10 69.3 240 28.3
vmacro07378 Vaccinium macrocarpon HOM05D000236 ORTHO05D000192 4.8e-10 69.3 269 30.5
Aqoxy1G00963 Aquilegia oxysepala HOM05D000236 ORTHO05D000192 6.2e-10 68.9 188 34.6
Duzib128G0203 Durio zibethinus HOM05D000236 ORTHO05D000192 6.2e-10 68.9 200 34.5
Gohir.A09G136300 Gossypium hirsutum HOM05D000236 ORTHO05D000192 6.2e-10 68.9 188 35.1
TAR636G0098 Trochodendron aralioides HOM05D000236 ORTHO05D000192 8.1e-10 68.6 239 31.0
AUR62004217 Chenopodium quinoa HOM05D000236 ORTHO05D000192 1.1e-09 68.2 203 34.0
Dinv21269 Davidia involucrata HOM05D000236 ORTHO05D000192 1.1e-09 68.2 193 34.2
Gohir.A04G066600 Gossypium hirsutum HOM05D000236 ORTHO05D000192 1.1e-09 68.2 193 35.2
Cpa.g.sc5.94 Carica papaya HOM05D000236 ORTHO05D000192 1.4e-09 67.8 126 42.1
AUR62043452 Chenopodium quinoa HOM05D000236 ORTHO05D000192 1.4e-09 67.8 182 30.8
Ca_19364_v3 Cicer arietinum L. HOM05D000236 ORTHO05D000192 1.4e-09 67.8 191 32.5
Gohir.D09G138200 Gossypium hirsutum HOM05D000236 ORTHO05D000192 1.4e-09 67.8 188 35.1
Gorai.006G158700 Gossypium raimondii HOM05D000236 ORTHO05D000192 1.4e-09 67.8 188 35.1
MBI01_g14116_MAGBIO Magnolia biondii HOM05D000236 ORTHO05D000192 1.4e-09 67.8 236 28.4
Rhsim03G0082600 Rhododendron simsii HOM05D000236 ORTHO05D000192 2.4e-09 67.0 195 34.9
CSS0045976 Camellia sinensis var. sinensis HOM05D000236 ORTHO05D026287 3.1e-09 66.6 236 29.2
Dinv19815 Davidia involucrata HOM05D000236 ORTHO05D000192 3.1e-09 66.6 185 33.5
MD14G1093500 Malus domestica HOM05D000236 ORTHO05D000192 4.0e-09 66.2 211 30.8
COL.COLO4_29835 Corchorus olitorius HOM05D000236 ORTHO05D000192 5.3e-09 65.9 204 32.4
Eucgr.A01561 Eucalyptus grandis HOM05D000236 ORTHO05D000192 5.3e-09 65.9 178 34.8
Thecc.05G079700 Theobroma cacao HOM05D000236 ORTHO05D000192 5.3e-09 65.9 198 32.8
SalBow5G3980 Salvia bowleyana HOM05D000236 ORTHO05D000192 6.9e-09 65.5 193 32.1
Cfa016519 Carpinus fangiana HOM05D000236 ORTHO05D000192 9.0e-09 65.1 198 34.3
CiPaw.10G004400 Carya illinoinensis HOM05D000236 ORTHO05D000192 9.0e-09 65.1 196 32.1
CDE08G1071 Ceratophyllum demersum HOM05D000236 ORTHO05D000192 9.0e-09 65.1 236 29.7
GSVIVG01033765001 Vitis vinifera HOM05D000236 ORTHO05D000192 9.0e-09 65.1 191 34.0
MSTRG.26657 Avicennia marina HOM05D000236 ORTHO05D000192 1.2e-08 64.7 174 33.3
Gohir.A01G140100 Gossypium hirsutum HOM05D000236 ORTHO05D000192 1.2e-08 64.7 199 34.7
Psat7g143520 Pisum sativum HOM05D000236 ORTHO05D000192 1.2e-08 64.7 246 28.5
arahy.Tifrunner.gnm1.ann1.609EQ8 Arachis hypogaea HOM05D000236 ORTHO05D000192 1.5e-08 64.3 163 33.7
AUR62013631 Chenopodium quinoa HOM05D000236 ORTHO05D000192 1.5e-08 64.3 195 32.8
Medtr4g055803 Medicago truncatula HOM05D000236 ORTHO05D000192 1.5e-08 64.3 120 33.3
Ah.12g058110 Amaranthus hybridus HOM05D000236 ORTHO05D000192 2.0e-08 63.9 183 31.1
CiPaw.09G007700 Carya illinoinensis HOM05D000236 ORTHO05D000192 2.0e-08 63.9 196 31.6
Ciclev10012017m.g Citrus clementina HOM05D000236 ORTHO05D000192 2.0e-08 63.9 238 30.7
Nitab4.5_0001922g0150 Nicotiana tabacum HOM05D000236 ORTHO05D000192 2.0e-08 63.9 163 35.0
QL07p040762 Quercus lobata HOM05D000236 ORTHO05D000192 2.0e-08 63.9 196 34.2
TWI77G0119 Tripterygium wilfordii HOM05D000236 ORTHO05D000192 2.0e-08 63.9 201 34.8
MSTRG.10344 Avicennia marina HOM05D000236 ORTHO05D000192 2.6e-08 63.5 186 32.8
TWI53G2091 Tripterygium wilfordii HOM05D000236 ORTHO05D000192 2.6e-08 63.5 202 33.7
EL10Ac1g00895 Beta vulgaris HOM05D000236 ORTHO05D000192 3.4e-08 63.2 195 32.8
DCAR_017632 Daucus carota HOM05D000236 ORTHO05D000192 3.4e-08 63.2 230 31.7
Manes.08G019700 Manihot esculenta HOM05D000236 ORTHO05D000192 3.4e-08 63.2 214 32.2
arahy.Tifrunner.gnm1.ann1.WDJ6GM Arachis hypogaea HOM05D000236 ORTHO05D000192 4.5e-08 62.8 164 35.4
Glyma.11G189800 Glycine max HOM05D000236 ORTHO05D000192 4.5e-08 62.8 194 27.3
Gohir.D01G129300 Gossypium hirsutum HOM05D000236 ORTHO05D000192 4.5e-08 62.8 199 34.2
Gorai.002G160000 Gossypium raimondii HOM05D000236 ORTHO05D000192 4.5e-08 62.8 199 34.2
PGSC0003DMG400003925 Solanum tuberosum HOM05D000236 ORTHO05D000192 4.5e-08 62.8 203 30.0
CDE06G0554 Ceratophyllum demersum HOM05D000236 ORTHO05D000192 5.8e-08 62.4 244 28.3
Cc06_g05090 Coffea canephora HOM05D000236 ORTHO05D000192 5.8e-08 62.4 201 32.3
Manes.09G060752 Manihot esculenta HOM05D000236 ORTHO05D000192 5.8e-08 62.4 221 32.1
Atru.chr8.1659 Acer truncatum HOM05D000236 ORTHO05D000192 7.6e-08 62.0 142 36.6
COL.COLO4_23850 Corchorus olitorius HOM05D000236 ORTHO05D000192 7.6e-08 62.0 192 30.2
Rhsim13G0106400 Rhododendron simsii HOM05D000236 ORTHO05D026287 7.6e-08 62.0 185 31.4
Duzib093G1118 Durio zibethinus HOM05D000236 ORTHO05D000192 9.9e-08 61.6 198 32.3
Peaxi162Scf00412g00712 Petunia axillaris HOM05D000236 ORTHO05D000192 9.9e-08 61.6 156 35.9
Prupe.7G119600 Prunus persica HOM05D000236 ORTHO05D000192 9.9e-08 61.6 210 31.9
Os12g0147000 Oryza sativa ssp. japonica HOM05D000236 ORTHO05D000192 1.3e-07 61.2 167 34.7
THA.LOC104824535 Tarenaya hassleriana HOM05D000236 ORTHO05D000192 1.3e-07 61.2 194 34.0
ATR0820G282 Amborella trichopoda HOM05D000236 ORTHO05D000192 1.7e-07 60.8 182 31.3
Medtr4g055833 Medicago truncatula HOM05D000236 ORTHO05D000192 1.7e-07 60.8 244 25.8
Ca_23648_v3 Cicer arietinum L. HOM05D000236 ORTHO05D000192 2.2e-07 60.5 196 30.1
Atru.chr9.1461 Acer truncatum HOM05D000236 ORTHO05D000192 2.9e-07 60.1 169 32.5
Carub.0006s3120 Capsella rubella HOM05D000236 ORTHO05D000192 2.9e-07 60.1 205 31.2
Haze_19520 Corylus avellana HOM05D000236 ORTHO05D000192 2.9e-07 60.1 143 36.4
DCAR_020220 Daucus carota HOM05D000236 ORTHO05D000192 2.9e-07 60.1 161 32.9
Hma1.2p1_0084F.1_g043110 Hydrangea macrophylla HOM05D000236 ORTHO05D000192 2.9e-07 60.1 130 36.9
Hma1.2p1_0651F.1_g195770 Hydrangea macrophylla HOM05D000236 ORTHO05D000192 2.9e-07 60.1 141 37.6
RcHm_v2.0_Chr3g0471871 Rosa chinensis HOM05D000236 ORTHO05D000192 2.9e-07 60.1 212 31.1
THA.LOC104827488 Tarenaya hassleriana HOM05D000236 ORTHO05D000192 2.9e-07 60.1 184 31.0
DCAR_018125 Daucus carota HOM05D000236 ORTHO05D000192 3.8e-07 59.7 172 29.7
TWI23G1140 Tripterygium wilfordii HOM05D000236 ORTHO05D000192 3.8e-07 59.7 178 30.3
MSTRG.5803 Avicennia marina HOM05D000236 ORTHO05D000192 4.9e-07 59.3 188 33.5
CANSAT80G2260 Cannabis sativa HOM05D000236 ORTHO05D000192 4.9e-07 59.3 128 37.5
SEGI_31821 Sequoiadendron giganteum HOM05D000236 ORTHO05D000192 4.9e-07 59.3 191 31.9
Haze_23475 Corylus avellana HOM05D000236 ORTHO05D034194 6.4e-07 58.9 119 37.0
Nn4g26414 Nelumbo nucifera HOM05D000236 ORTHO05D000192 6.4e-07 58.9 147 37.4
Psat1g105480 Pisum sativum HOM05D000236 ORTHO05D000192 6.4e-07 58.9 161 32.3
Hund04041 Selenicereus undatus HOM05D000236 ORTHO05D000192 6.4e-07 58.9 149 40.3
Ah.05g174160 Amaranthus hybridus HOM05D000236 ORTHO05D000192 8.4e-07 58.5 195 31.3
Glyma.09G153600 Glycine max HOM05D000236 ORTHO05D000192 8.4e-07 58.5 193 31.6
Sed0017302 Sechium edule HOM05D000236 ORTHO05D000192 8.4e-07 58.5 186 31.7
Thecc.03G263500 Theobroma cacao HOM05D000236 ORTHO05D000192 8.4e-07 58.5 192 29.7
Ca_11619_v3 Cicer arietinum L. HOM05D000236 ORTHO05D000192 1.1e-06 58.2 127 38.6
Dinv39066 Davidia involucrata HOM05D000236 ORTHO05D000192 1.1e-06 58.2 234 27.4
Glyma.12G084400 Glycine max HOM05D000236 ORTHO05D000192 1.1e-06 58.2 120 33.3
Lsat_1_v5_gn_3_3340 Lactuca sativa HOM05D000236 ORTHO05D000192 1.1e-06 58.2 194 29.4
Lj3g0011650 Lotus japonicus HOM05D000236 ORTHO05D000192 1.1e-06 58.2 203 31.5
Lalb_Chr15g0077231 Lupinus albus HOM05D000236 ORTHO05D000192 1.1e-06 58.2 157 31.8
Psat6g078600 Pisum sativum HOM05D000236 ORTHO05D000192 1.1e-06 58.2 205 31.7
Ah.05g180740 Amaranthus hybridus HOM05D000236 ORTHO05D000192 1.4e-06 57.8 178 33.1
MSTRG.13790 Avicennia marina HOM05D000236 ORTHO05D000192 1.4e-06 57.8 205 29.8
FAN14G5897 Fragaria x ananassa HOM05D000236 ORTHO05D000192 1.4e-06 57.8 213 30.5
Lj5g0027010 Lotus japonicus HOM05D000236 ORTHO05D000192 1.4e-06 57.8 153 35.3
Manes.05G044900 Manihot esculenta HOM05D000236 ORTHO05D000192 1.4e-06 57.8 194 32.0
Nitab4.5_0010125g0020 Nicotiana tabacum HOM05D000236 ORTHO05D000192 1.4e-06 57.8 148 36.5
Solyc09g008940.4 Solanum lycopersicum HOM05D000236 ORTHO05D000192 1.4e-06 57.8 149 37.6
Sopen09g003710 Solanum pennellii HOM05D000236 ORTHO05D000192 1.4e-06 57.8 149 37.6
PGSC0003DMG400002725 Solanum tuberosum HOM05D000236 ORTHO05D000192 1.4e-06 57.8 149 37.6
TWI59G0807 Tripterygium wilfordii HOM05D000236 ORTHO05D000192 1.4e-06 57.8 185 31.4
AL6G53300 Arabidopsis lyrata HOM05D000236 ORTHO05D000192 1.9e-06 57.4 162 34.6
Cpa.g.sc349.2 Carica papaya HOM05D000236 ORTHO05D000192 1.9e-06 57.4 193 30.1
Eucgr.E00486 Eucalyptus grandis HOM05D000236 ORTHO05D000192 1.9e-06 57.4 152 36.2
FvH4_6g17630 Fragaria vesca HOM05D000236 ORTHO05D000192 1.9e-06 57.4 150 36.7
Glyma.16G204400 Glycine max HOM05D000236 ORTHO05D000192 1.9e-06 57.4 242 26.4
Medtr4g055813 Medicago truncatula HOM05D000236 ORTHO05D000192 1.9e-06 57.4 120 36.7
Nitab4.5_0001816g0150 Nicotiana tabacum HOM05D000236 ORTHO05D000192 1.9e-06 57.4 173 31.2
TWI14G0710 Tripterygium wilfordii HOM05D000236 ORTHO05D000192 1.9e-06 57.4 193 29.5
TWI31G0182 Tripterygium wilfordii HOM05D000236 ORTHO05D000192 1.9e-06 57.4 186 30.6
MSTRG.1930 Avicennia marina HOM05D000236 ORTHO05D000192 2.4e-06 57.0 165 32.7
CDE06G0063 Ceratophyllum demersum HOM05D000236 ORTHO05D000192 2.4e-06 57.0 201 30.8
Cc08_g13420 Coffea canephora HOM05D000236 ORTHO05D000192 2.4e-06 57.0 152 34.2
PSO384G4837 Papaver somniferum HOM05D000236 ORTHO05D000192 2.4e-06 57.0 142 34.5
SGA_v2.0_scaffold40G15420 Striga asiatica HOM05D000236 ORTHO05D000192 2.4e-06 57.0 141 35.5
TWI14G1280 Tripterygium wilfordii HOM05D000236 ORTHO05D000192 2.4e-06 57.0 178 30.9
GSVIVG01027617001 Vitis vinifera HOM05D000236 ORTHO05D000192 2.4e-06 57.0 167 32.9
Atru.chr5.314 Acer truncatum HOM05D000236 ORTHO05D000192 3.2e-06 56.6 197 30.5
ATR0680G105 Amborella trichopoda HOM05D000236 ORTHO05D000192 3.2e-06 56.6 178 30.3
MELO3C005590.2 Cucumis melo HOM05D000236 ORTHO05D000192 3.2e-06 56.6 191 29.8
MELO3C021460.2 Cucumis melo HOM05D000236 ORTHO05D022373 3.2e-06 56.6 136 32.4
Thhalv10028822m.g Eutrema salsugineum HOM05D000236 ORTHO05D000192 3.2e-06 56.6 173 31.2
Lalb_Chr02g0155231 Lupinus albus HOM05D000236 ORTHO05D000192 3.2e-06 56.6 180 31.1
Peaxi162Scf00271g00038 Petunia axillaris HOM05D000236 ORTHO05D000192 3.2e-06 56.6 212 29.2
Phvul.007G223900 Phaseolus vulgaris HOM05D000236 ORTHO05D000192 3.2e-06 56.6 193 31.6
TPR.G5691 Trifolium pratense HOM05D000236 ORTHO05D000192 3.2e-06 56.6 208 30.8
VMungo0464G1432 Vigna mungo HOM05D000236 ORTHO05D000192 3.2e-06 56.6 204 29.4
ATR0605G127 Amborella trichopoda HOM05D000236 ORTHO05D000192 4.2e-06 56.2 177 32.8
arahy.Tifrunner.gnm1.ann1.K54NA5 Arachis hypogaea HOM05D000236 ORTHO05D000192 4.2e-06 56.2 178 30.9
EL10Ac3g05794 Beta vulgaris HOM05D000236 ORTHO05D000192 4.2e-06 56.2 184 30.4
Thhalv10017731m.g Eutrema salsugineum HOM05D000236 ORTHO05D014829 4.2e-06 56.2 160 32.5
FAN02G0875 Fragaria x ananassa HOM05D000236 ORTHO05D000192 4.2e-06 56.2 150 36.0
FAN09G3237 Fragaria x ananassa HOM05D000236 ORTHO05D000192 4.2e-06 56.2 215 29.8
Lj5g0010553 Lotus japonicus HOM05D000236 ORTHO05D000192 4.2e-06 56.2 198 30.3
PSO339G1732 Papaver somniferum HOM05D000236 ORTHO05D000192 4.2e-06 56.2 142 34.5
PGR042G2647 Punica granatum HOM05D000236 ORTHO05D000192 4.2e-06 56.2 172 31.4
Sed0019723 Sechium edule HOM05D000236 ORTHO05D000192 4.2e-06 56.2 166 31.9
Sed0024102 Sechium edule HOM05D000236 ORTHO05D000192 4.2e-06 56.2 236 26.3
arahy.Tifrunner.gnm1.ann1.GF06UQ Arachis hypogaea HOM05D000236 ORTHO05D000192 5.5e-06 55.8 178 29.8
DCAR_025185 Daucus carota HOM05D000236 ORTHO05D000192 5.5e-06 55.8 166 38.0
Duzib138G1566 Durio zibethinus HOM05D000236 ORTHO05D000192 5.5e-06 55.8 179 31.3
TAR628G0911 Trochodendron aralioides HOM05D000236 ORTHO05D000192 5.5e-06 55.8 175 32.0
HPP92_020664 Vanilla planifolia HOM05D000236 ORTHO05D000192 5.5e-06 55.8 151 30.5
AT4G12080 Arabidopsis thaliana HOM05D000236 ORTHO05D000192 7.1e-06 55.5 204 29.4
arahy.Tifrunner.gnm1.ann1.Z4FMKE Arachis hypogaea HOM05D000236 ORTHO05D000192 7.1e-06 55.5 190 30.5
CAN.G1394.38 Capsicum annuum HOM05D000236 ORTHO05D000192 7.1e-06 55.5 158 32.9
Thhalv10028768m.g Eutrema salsugineum HOM05D000236 ORTHO05D000192 7.1e-06 55.5 204 29.4
Nitab4.5_0005241g0050 Nicotiana tabacum HOM05D000236 ORTHO05D000192 7.1e-06 55.5 116 36.2
Oeu059476.1 Olea europaea HOM05D000236 ORTHO05D000192 7.1e-06 55.5 60 53.3
Os11g0149100 Oryza sativa ssp. japonica HOM05D000236 ORTHO05D000192 7.1e-06 55.5 150 33.3
QL08p052292 Quercus lobata HOM05D000236 ORTHO05D000192 7.1e-06 55.5 200 28.5
Solyc08g079630.3 Solanum lycopersicum HOM05D000236 ORTHO05D000192 7.1e-06 55.5 152 32.9
Sopen08g027990 Solanum pennellii HOM05D000236 ORTHO05D000192 7.1e-06 55.5 152 32.9
SGA_v2.0_scaffold37G14848 Striga asiatica HOM05D000236 ORTHO05D000192 7.1e-06 55.5 209 29.2
TAR376G0766 Trochodendron aralioides HOM05D000236 ORTHO05D000192 7.1e-06 55.5 183 32.8
Aqoxy6G02986 Aquilegia oxysepala HOM05D000236 ORTHO05D000192 9.3e-06 55.1 167 33.5
MSTRG.1002 Avicennia marina HOM05D000236 ORTHO05D000192 9.3e-06 55.1 122 36.1
Cpa.g.sc18.240 Carica papaya HOM05D000236 ORTHO05D000192 9.3e-06 55.1 178 30.9
CiPaw.08G077200 Carya illinoinensis HOM05D000236 ORTHO05D000192 9.3e-06 55.1 267 28.5
Ciclev10021116m.g Citrus clementina HOM05D000236 ORTHO05D000192 9.3e-06 55.1 192 29.2
Dinv43802 Davidia involucrata HOM05D000236 ORTHO05D000192 9.3e-06 55.1 178 30.9
Medtr8g031100 Medicago truncatula HOM05D000236 ORTHO05D000192 9.3e-06 55.1 199 29.6
PSO478G0079 Papaver somniferum HOM05D000236 ORTHO05D000192 9.3e-06 55.1 258 29.1
Potri.014G082100 Populus trichocarpa HOM05D000236 ORTHO05D000192 9.3e-06 55.1 178 30.3
Sabra14G0059600 Salix brachista HOM05D000236 ORTHO05D000192 9.3e-06 55.1 178 30.3
SGA_v2.0_scaffold220G42647 Striga asiatica HOM05D000236 ORTHO05D000192 9.3e-06 55.1 129 36.4


User provided reference genes

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