Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010077 Carpinus fangiana HOM05D008128 ORTHO05D010259 2.9e-46 188.3 104 100.0
CiPaw.05G064900 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.0e-27 126.7 105 74.3
CiPaw.13G140600 Carya illinoinensis HOM05D008128 ORTHO05D010259 1.1e-24 116.7 106 68.9
QL01p013611 Quercus lobata HOM05D008128 ORTHO05D010259 1.3e-22 109.8 94 72.3
CiPaw.14G103200 Carya illinoinensis HOM05D008128 ORTHO05D010259 9.3e-21 103.6 91 67.0
QL08p023218 Quercus lobata HOM05D008128 ORTHO05D010259 1.8e-16 89.4 99 60.6
Prupe.6G119900 Prunus persica HOM05D008128 ORTHO05D010259 4.1e-16 88.2 104 55.8
Gohir.D05G086500 Gossypium hirsutum HOM05D008128 ORTHO05D010259 2.0e-15 85.9 105 51.4
MD11G1158100 Malus domestica HOM05D008128 ORTHO05D010259 2.6e-15 85.5 104 55.8
Duzib168G2012 Durio zibethinus HOM05D008128 ORTHO05D010259 4.5e-15 84.7 104 50.0
Gorai.009G088100 Gossypium raimondii HOM05D008128 ORTHO05D010259 5.9e-15 84.3 105 50.5
Gohir.A05G083600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 1.0e-14 83.6 105 50.5
Duzib170G0339 Durio zibethinus HOM05D008128 ORTHO05D010259 1.7e-14 82.8 104 51.9
FvH4_3g24190 Fragaria vesca HOM05D008128 ORTHO05D010259 5.0e-14 81.3 104 50.0
Potri.009G148400 Populus trichocarpa HOM05D008128 ORTHO05D010259 5.0e-14 81.3 102 56.9
Thecc.09G290900 Theobroma cacao HOM05D008128 ORTHO05D010259 5.0e-14 81.3 104 52.9
FAN25G2677 Fragaria x ananassa HOM05D008128 ORTHO05D010259 1.1e-13 80.1 104 49.0
MD03G1135500 Malus domestica HOM05D008128 ORTHO05D010259 1.1e-13 80.1 104 52.9
FAN25G1097 Fragaria x ananassa HOM05D008128 ORTHO05D010259 1.4e-13 79.7 104 49.0
RcHm_v2.0_Chr5g0043301 Rosa chinensis HOM05D008128 ORTHO05D010259 1.4e-13 79.7 104 51.0
TWI31G0843 Tripterygium wilfordii HOM05D008128 ORTHO05D010259 1.4e-13 79.7 108 51.9
Manes.04G008100 Manihot esculenta HOM05D008128 ORTHO05D010259 9.4e-13 77.0 105 54.3
Nn6g35034 Nelumbo nucifera HOM05D008128 ORTHO05D010259 3.6e-12 75.1 110 51.8
Manes.11G157800 Manihot esculenta HOM05D008128 ORTHO05D010259 4.6e-12 74.7 67 70.1
GSVIVG01031392001 Vitis vinifera HOM05D008128 ORTHO05D010259 7.9e-12 73.9 114 48.2
CANSAT54G0355 Cannabis sativa HOM05D008128 ORTHO05D010259 3.9e-11 71.6 96 51.0
Gohir.A07G107600 Gossypium hirsutum HOM05D008128 ORTHO05D010259 3.9e-11 71.6 106 49.1
Dinv29430 Davidia involucrata HOM05D008128 ORTHO05D010259 5.1e-11 71.2 104 46.2
PSO170G0300 Papaver somniferum HOM05D008128 ORTHO05D010259 2.0e-10 69.3 103 44.7
PSO443G0067 Papaver somniferum HOM05D008128 ORTHO05D010259 4.3e-10 68.2 106 43.4
THA.LOC104826404 Tarenaya hassleriana HOM05D008128 ORTHO05D010259 7.4e-10 67.4 105 46.7
PSO384G2376 Papaver somniferum HOM05D008128 ORTHO05D010259 1.3e-09 66.6 103 42.7
EL10Ac9g21090 Beta vulgaris HOM05D008128 ORTHO05D010259 1.7e-09 66.2 106 48.1
FAN21G1942 Fragaria x ananassa HOM05D008128 ORTHO05D010259 2.2e-09 65.9 101 44.6
FAN11G2911 Fragaria x ananassa HOM05D008128 ORTHO05D010259 2.8e-09 65.5 101 44.6
Dinv21251 Davidia involucrata HOM05D008128 ORTHO05D010259 8.2e-09 63.9 106 48.1
BolC4t23880H Brassica oleracea HOM05D008128 ORTHO05D010259 1.1e-08 63.5 98 45.9
PSO210G6229 Papaver somniferum HOM05D008128 ORTHO05D010259 1.4e-08 63.2 103 43.7
AT2G27775 Arabidopsis thaliana HOM05D008128 ORTHO05D010259 1.8e-08 62.8 87 48.3
A07p18370 Brassica napus HOM05D008128 ORTHO05D010259 2.4e-08 62.4 96 44.8
BraA07t29553Z Brassica rapa HOM05D008128 ORTHO05D010259 2.4e-08 62.4 97 44.3
Gorai.001G119900 Gossypium raimondii HOM05D008128 ORTHO05D010259 2.4e-08 62.4 76 50.0
Actinidia08433 Actinidia chinensis HOM05D008128 ORTHO05D010259 3.1e-08 62.0 67 58.2
AL4G22520 Arabidopsis lyrata HOM05D008128 ORTHO05D010259 4.1e-08 61.6 87 46.0
Aa31LG5G8220 Aethionema arabicum HOM05D008128 ORTHO05D010259 5.3e-08 61.2 74 54.1
C04p23830 Brassica napus HOM05D008128 ORTHO05D010259 6.9e-08 60.8 98 44.9
BcaB06g28169 Brassica carinata HOM05D008128 ORTHO05D010259 9.1e-08 60.5 103 46.6
Carub.0004s0853 Capsella rubella HOM05D008128 ORTHO05D010259 9.1e-08 60.5 46 67.4
Sp4g10610 Schrenkiella parvula HOM05D008128 ORTHO05D010259 1.2e-07 60.1 105 41.9
CARHR120480 Cardamine hirsuta HOM05D008128 ORTHO05D010259 2.6e-07 58.9 96 44.8
BcaC02g08229 Brassica carinata HOM05D008128 ORTHO05D010259 5.9e-07 57.8 45 64.4
A04p21130 Brassica napus HOM05D008128 ORTHO05D010259 5.9e-07 57.8 45 64.4
BcaB02g10115 Brassica carinata HOM05D008128 ORTHO05D010259 1.0e-06 57.0 105 43.8
C04p56930 Brassica napus HOM05D008128 ORTHO05D010259 1.0e-06 57.0 103 39.8
Sed0019677 Sechium edule HOM05D008128 ORTHO05D010259 1.7e-06 56.2 130 37.7
QL07p007910 Quercus lobata HOM05D008128 ORTHO05D010259 2.2e-06 55.8 37 75.7
BcaC02g10905 Brassica carinata HOM05D008128 ORTHO05D010259 3.8e-06 55.1 106 44.3
Actinidia05455 Actinidia chinensis HOM05D008128 ORTHO05D010259 5.0e-06 54.7 63 54.0
Sabra09G0116800 Salix brachista HOM05D008128 ORTHO05D010259 8.5e-06 53.9 90 48.9


User provided reference genes

Program Settings