Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa010034 Carpinus fangiana HOM05D005062 ORTHO05D006410 9.3e-63 243.4 128 100.0
QL01p012456 Quercus lobata HOM05D005062 ORTHO05D006410 3.7e-51 204.9 127 84.3
CiPaw.14G101300 Carya illinoinensis HOM05D005062 ORTHO05D006410 2.6e-49 198.7 128 82.0
Haze_23392 Corylus avellana HOM05D005062 ORTHO05D006410 1.2e-46 189.9 102 98.0
GSVIVG01036146001 Vitis vinifera HOM05D005062 ORTHO05D006410 1.3e-40 169.9 123 76.4
PGR102G2753 Punica granatum HOM05D005062 ORTHO05D006410 2.1e-38 162.5 119 72.3
Eucgr.B03869 Eucalyptus grandis HOM05D005062 ORTHO05D006410 1.0e-37 160.2 123 69.1
CiPaw.14G101100 Carya illinoinensis HOM05D005062 ORTHO05D006410 2.3e-37 159.1 128 69.5
Aqoxy2G01214 Aquilegia oxysepala HOM05D005062 ORTHO05D006410 1.1e-36 156.8 119 68.9
Nn2g14130 Nelumbo nucifera HOM05D005062 ORTHO05D006410 2.5e-36 155.6 128 64.8
RcHm_v2.0_Chr1g0332571 Rosa chinensis HOM05D005062 ORTHO05D006410 9.7e-36 153.7 118 64.4
FvH4_7g05590 Fragaria vesca HOM05D005062 ORTHO05D006410 6.3e-35 151.0 118 65.3
FAN01G3081 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.3e-35 151.0 118 65.3
FAN10G1073 Fragaria x ananassa HOM05D005062 ORTHO05D006410 6.3e-35 151.0 118 65.3
Duzib106G1045 Durio zibethinus HOM05D005062 ORTHO05D006410 1.1e-34 150.2 120 65.8
Cpa.g.sc183.10 Carica papaya HOM05D005062 ORTHO05D006410 1.8e-34 149.4 123 61.8
MD02G1256200 Malus domestica HOM05D005062 ORTHO05D006410 1.8e-34 149.4 120 63.3
TAR623G1543 Trochodendron aralioides HOM05D005062 ORTHO05D006410 2.4e-34 149.1 115 67.0
QL04p046667 Quercus lobata HOM05D005062 ORTHO05D006410 3.1e-34 148.7 120 65.0
FAN23G1474 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.1e-34 148.3 118 64.4
FAN23G1954 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.1e-34 148.3 118 64.4
FAN23G2695 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.1e-34 148.3 118 64.4
MD02G1255900 Malus domestica HOM05D005062 ORTHO05D006410 4.1e-34 148.3 120 63.3
Dinv11848 Davidia involucrata HOM05D005062 ORTHO05D006410 6.9e-34 147.5 122 60.7
CSS0050380 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.2e-33 146.7 120 60.0
Rhsim03G0099700 Rhododendron simsii HOM05D005062 ORTHO05D006410 1.2e-33 146.7 123 61.8
Atru.chr12.1008 Acer truncatum HOM05D005062 ORTHO05D006410 1.5e-33 146.4 120 62.5
Actinidia18593 Actinidia chinensis HOM05D000444 ORTHO05D000489 1.5e-33 146.4 120 60.0
CSS0021342 Camellia sinensis var. sinensis HOM05D005062 ORTHO05D006410 1.5e-33 146.4 118 60.2
Cc02_g09770 Coffea canephora HOM05D005062 ORTHO05D006410 2.0e-33 146.0 122 59.8
Lsat_1_v5_gn_2_104621 Lactuca sativa HOM05D005062 ORTHO05D006410 2.0e-33 146.0 120 58.3
Ah.08g215800 Amaranthus hybridus HOM05D005062 ORTHO05D006410 2.6e-33 145.6 120 61.7
Cfa010314 Carpinus fangiana HOM05D005062 ORTHO05D006410 2.6e-33 145.6 118 64.4
DCAR_006341 Daucus carota HOM05D005062 ORTHO05D006410 2.6e-33 145.6 122 60.7
HanXRQChr08g0217571 Helianthus annuus HOM05D005062 ORTHO05D006410 2.6e-33 145.6 122 61.5
HanXRQChr08g0217771 Helianthus annuus HOM05D005062 ORTHO05D006410 2.6e-33 145.6 123 59.3
EL10Ac7g15813 Beta vulgaris HOM05D005062 ORTHO05D006410 5.9e-33 144.4 122 60.7
Oeu026579.1 Olea europaea HOM05D005062 ORTHO05D006410 1.3e-32 143.3 122 60.7
GSVIVG01011284001 Vitis vinifera HOM05D005062 ORTHO05D006410 1.3e-32 143.3 122 60.7
Gorai.008G099000 Gossypium raimondii HOM05D005062 ORTHO05D006410 1.7e-32 142.9 120 60.8
HanXRQChr11g0342201 Helianthus annuus HOM05D005062 ORTHO05D006410 5.0e-32 141.4 128 55.5
PGR044G2170 Punica granatum HOM05D005062 ORTHO05D006410 5.0e-32 141.4 122 60.7
CDE06G2329 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 6.5e-32 141.0 128 59.4
Gohir.A12G092722 Gossypium hirsutum HOM05D005062 ORTHO05D006410 1.1e-31 140.2 120 60.0
CAN.G54.5 Capsicum annuum HOM05D005062 ORTHO05D006410 1.9e-31 139.4 118 58.5
CsaV3_2G034960 Cucumis sativus L. HOM05D005062 ORTHO05D006410 1.9e-31 139.4 120 57.5
Migut.F01613 Erythranthe guttata HOM05D005062 ORTHO05D006410 1.9e-31 139.4 122 59.8
SalBow6G6867 Salvia bowleyana HOM05D005062 ORTHO05D006410 1.9e-31 139.4 122 57.4
Solyc07g014740.3 Solanum lycopersicum HOM05D005062 ORTHO05D006410 1.9e-31 139.4 118 58.5
CiPaw.13G040200 Carya illinoinensis HOM05D005062 ORTHO05D006410 3.2e-31 138.7 120 59.2
Manes.10G058650 Manihot esculenta HOM05D005062 ORTHO05D006410 4.2e-31 138.3 118 55.9
Nitab4.5_0010225g0010 Nicotiana tabacum HOM05D005062 ORTHO05D006410 4.2e-31 138.3 120 60.0
FAN03G1004 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.5e-31 137.9 130 57.7
Eucgr.J00992 Eucalyptus grandis HOM05D005062 ORTHO05D006410 9.4e-31 137.1 122 58.2
Lsat_1_v5_gn_8_23960 Lactuca sativa HOM05D005062 ORTHO05D006410 1.2e-30 136.7 120 58.3
Lalb_Chr19g0129181 Lupinus albus HOM05D005062 ORTHO05D006410 1.6e-30 136.3 119 59.7
SGA_v2.0_scaffold13G06459 Striga asiatica HOM05D005062 ORTHO05D006410 1.6e-30 136.3 122 55.7
AUR62009772 Chenopodium quinoa HOM05D005062 ORTHO05D006410 2.7e-30 135.6 122 57.4
AUR62039218 Chenopodium quinoa HOM05D005062 ORTHO05D006410 2.7e-30 135.6 122 56.6
Lj5g0026270 Lotus japonicus HOM05D005062 ORTHO05D006410 2.7e-30 135.6 112 62.5
Potri.008G021600 Populus trichocarpa HOM05D005062 ORTHO05D006410 3.6e-30 135.2 118 57.6
ATR0081G026 Amborella trichopoda HOM05D005062 ORTHO05D006410 4.7e-30 134.8 120 56.7
Sabra08G0014600 Salix brachista HOM05D005062 ORTHO05D006410 6.1e-30 134.4 118 56.8
Peaxi162Scf00235g10011 Petunia axillaris HOM05D005062 ORTHO05D006410 7.9e-30 134.0 124 57.3
ECA238G3155 Erigeron canadensis HOM05D005062 ORTHO05D006410 1.0e-29 133.7 118 56.8
THA.LOC104824209 Tarenaya hassleriana HOM05D005062 ORTHO05D006410 1.4e-29 133.3 117 56.4
MSTRG.8110 Avicennia marina HOM05D005062 ORTHO05D006410 1.8e-29 132.9 123 54.5
HPP92_007815 Vanilla planifolia HOM05D005062 ORTHO05D006410 1.8e-29 132.9 118 58.5
arahy.Tifrunner.gnm1.ann1.ZAGE2X Arachis hypogaea HOM05D005062 ORTHO05D006410 3.0e-29 132.1 121 57.9
Phvul.007G247700 Phaseolus vulgaris HOM05D005062 ORTHO05D006410 3.9e-29 131.7 113 60.2
Medtr1g050462 Medicago truncatula HOM05D005062 ORTHO05D006410 5.1e-29 131.3 118 57.6
Os02g0531200 Oryza sativa ssp. japonica HOM05D005062 ORTHO05D006410 6.7e-29 131.0 121 55.4
AT3G56160 Arabidopsis thaliana HOM05D005062 ORTHO05D006410 1.1e-28 130.2 117 56.4
TPR.G10638 Trifolium pratense HOM05D005062 ORTHO05D006410 1.1e-28 130.2 117 57.3
AUR62034504 Chenopodium quinoa HOM05D005062 ORTHO05D006410 1.5e-28 129.8 118 55.1
Ca_12731_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 1.5e-28 129.8 117 56.4
Psat6g129720 Pisum sativum HOM05D005062 ORTHO05D006410 2.0e-28 129.4 117 57.3
CARHR166310 Cardamine hirsuta HOM05D005062 ORTHO05D006410 2.6e-28 129.0 120 54.2
ECA233G2289 Erigeron canadensis HOM05D005062 ORTHO05D006410 4.4e-28 128.3 108 60.2
FAN06G1220 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.4e-28 128.3 103 66.0
arahy.Tifrunner.gnm1.ann1.BZ57JC Arachis hypogaea HOM05D005062 ORTHO05D006410 7.4e-28 127.5 112 58.9
AL5G37480 Arabidopsis lyrata HOM05D005062 ORTHO05D006410 9.7e-28 127.1 117 54.7
Duzib128G0173 Durio zibethinus HOM05D005062 ORTHO05D006410 1.7e-27 126.3 144 50.7
Sc12g0004460 Simmondsia chinensis HOM05D005062 ORTHO05D006410 1.7e-27 126.3 104 64.4
Glyma.10G111800 Glycine max HOM05D005062 ORTHO05D006410 2.8e-27 125.6 119 54.6
Sp5g06340 Schrenkiella parvula HOM05D005062 ORTHO05D006410 2.8e-27 125.6 120 54.2
COL.COLO4_24555 Corchorus olitorius HOM05D005062 ORTHO05D006410 8.2e-27 124.0 92 67.4
VMungo0720G3089 Vigna mungo HOM05D000444 ORTHO05D000489 8.2e-27 124.0 106 60.4
EL10As25g24233 Beta vulgaris HOM05D005062 ORTHO05D006410 2.4e-26 122.5 118 52.5
BcaB01g00026 Brassica carinata HOM05D002435 ORTHO05D002550 2.4e-26 122.5 120 55.0
BcaC07g39930 Brassica carinata HOM05D002435 ORTHO05D002550 2.4e-26 122.5 120 55.0
A09p49130 Brassica napus HOM05D002435 ORTHO05D002550 2.4e-26 122.5 120 55.0
C08p31440 Brassica napus HOM05D002435 ORTHO05D002550 2.4e-26 122.5 120 55.0
BolC8t50765H Brassica oleracea HOM05D002435 ORTHO05D002550 2.4e-26 122.5 120 55.0
BraA09t40366Z Brassica rapa HOM05D005062 ORTHO05D006410 2.4e-26 122.5 120 55.0
Hund06778 Selenicereus undatus HOM05D005062 ORTHO05D006410 3.8e-24 115.2 118 53.4
Haze_02484 Corylus avellana HOM05D005062 ORTHO05D006410 8.5e-24 114.0 118 54.2
Ciclev10033893m.g Citrus clementina HOM05D005062 ORTHO05D006410 1.9e-23 112.8 98 57.1
FAN06G3794 Fragaria x ananassa HOM05D005062 ORTHO05D006410 5.5e-23 111.3 93 61.3
Thhalv10006005m.g Eutrema salsugineum HOM05D005062 ORTHO05D006410 1.6e-22 109.8 104 57.7
Ah.09g232820 Amaranthus hybridus HOM05D005062 ORTHO05D006410 1.1e-18 97.1 137 41.6
unitig_578.g16343 Utricularia gibba HOM05D005062 ORTHO05D006410 1.1e-15 87.0 114 41.2
A02p12720 Brassica napus HOM05D005062 ORTHO05D006410 2.1e-14 82.8 64 64.1
CBR_g48207 Chara braunii HOM05D000019 ORTHO05D000048 1.4e-13 80.1 66 59.1
Mapoly0046s0115 Marchantia polymorpha HOM05D005062 ORTHO05D006410 8.8e-13 77.4 118 39.8
FAN01G2288 Fragaria x ananassa HOM05D005062 ORTHO05D006410 4.4e-12 75.1 44 77.3
Sopen07g005620 Solanum pennellii HOM05D000002 ORTHO05D000001 5.7e-12 74.7 49 71.4
Lj3A928T57 Lonicera japonica HOM05D005062 ORTHO05D006410 8.3e-11 70.9 69 52.2
Sed0016949 Sechium edule HOM05D005062 ORTHO05D006410 5.4e-10 68.2 69 47.8
RcHm_v2.0_Chr1g0332541 Rosa chinensis HOM05D005062 ORTHO05D006410 1.7e-08 63.2 54 55.6
Ca_12794_v3 Cicer arietinum L. HOM05D005062 ORTHO05D006410 3.2e-07 58.9 44 61.4
CDE08G0076 Ceratophyllum demersum HOM05D005062 ORTHO05D006410 6.1e-06 54.7 35 77.1


User provided reference genes

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