Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009942 Carpinus fangiana HOM05D008514 ORTHO05D010490 1.2e-94 349.7 173 100.0
Haze_23309 Corylus avellana HOM05D008514 ORTHO05D010490 1.5e-39 166.8 122 76.2
QL01p011158 Quercus lobata HOM05D008514 ORTHO05D010490 1.7e-19 100.1 75 66.7
CiPaw.14G094900 Carya illinoinensis HOM05D008514 ORTHO05D010490 8.5e-19 97.8 124 49.2
CiPaw.13G130800 Carya illinoinensis HOM05D008514 ORTHO05D010490 3.2e-18 95.9 120 50.8
QL01p020143 Quercus lobata HOM05D008514 ORTHO05D010490 2.6e-15 86.3 75 61.3
arahy.Tifrunner.gnm1.ann1.UQY7KW Arachis hypogaea HOM05D008514 ORTHO05D010490 1.7e-14 83.6 146 39.7
Duzib170G0491 Durio zibethinus HOM05D008514 ORTHO05D010490 3.1e-13 79.3 110 46.4
Thecc.09G274000 Theobroma cacao HOM05D008514 ORTHO05D010490 5.4e-13 78.6 109 51.4
arahy.Tifrunner.gnm1.ann1.14V2F6 Arachis hypogaea HOM05D008514 ORTHO05D010490 2.0e-12 76.6 126 40.5
Glyma.12G187800 Glycine max HOM05D008514 ORTHO05D010490 3.5e-12 75.9 123 40.7
Glyma.13G313400 Glycine max HOM05D008514 ORTHO05D010490 5.9e-12 75.1 123 40.7
Lalb_Chr24g0393401 Lupinus albus HOM05D008514 ORTHO05D010490 1.3e-11 73.9 122 40.2
Phvul.005G120600 Phaseolus vulgaris HOM05D008514 ORTHO05D010490 1.3e-11 73.9 122 39.3
VMungo1080G0611 Vigna mungo HOM05D008514 ORTHO05D010490 5.0e-11 72.0 122 41.0
Prupe.6G143500 Prunus persica HOM05D008514 ORTHO05D010490 1.9e-10 70.1 87 47.1
FvH4_6g16343 Fragaria vesca HOM05D022265 ORTHO05D010490 2.5e-10 69.7 105 39.0
Gohir.A09G098550 Gossypium hirsutum HOM05D008514 ORTHO05D010490 2.5e-10 69.7 76 57.9
Dinv17092 Davidia involucrata HOM05D002527 ORTHO05D002865 4.2e-10 68.9 78 52.6
Gohir.D09G097950 Gossypium hirsutum HOM05D008514 ORTHO05D010490 4.2e-10 68.9 75 54.7
Gorai.006G114900 Gossypium raimondii HOM05D008514 ORTHO05D010490 4.2e-10 68.9 75 54.7
RcHm_v2.0_Chr3g0470211 Rosa chinensis HOM05D022265 ORTHO05D010490 4.2e-10 68.9 119 40.3
FAN02G1308 Fragaria x ananassa HOM05D022265 ORTHO05D010490 5.5e-10 68.6 122 38.5
FAN09G3467 Fragaria x ananassa HOM05D022265 ORTHO05D010490 7.2e-10 68.2 77 48.1
Nn6g34697 Nelumbo nucifera HOM05D008514 ORTHO05D010490 1.2e-09 67.4 116 39.7
TAR623G0293 Trochodendron aralioides HOM05D008514 ORTHO05D010490 1.2e-09 67.4 120 40.0
Sabra16G0126400 Salix brachista HOM05D008514 ORTHO05D010490 1.6e-09 67.0 122 38.5
Actinidia35477 Actinidia chinensis HOM05D008514 ORTHO05D010490 3.6e-09 65.9 83 48.2
FAN05G4022 Fragaria x ananassa HOM05D022265 ORTHO05D010490 4.7e-09 65.5 77 46.8
Actinidia37064 Actinidia chinensis HOM05D008514 ORTHO05D010490 2.3e-08 63.2 130 40.8
Sabra09G0012000 Salix brachista HOM05D008514 ORTHO05D010490 4.0e-08 62.4 122 36.1
TPR.G4224 Trifolium pratense HOM05D008514 ORTHO05D010490 5.2e-08 62.0 123 37.4
Sed0021652 Sechium edule HOM05D029204 ORTHO05D010490 6.8e-08 61.6 71 47.9
CsaV3_1G015250 Cucumis sativus L. HOM05D029204 ORTHO05D010490 1.2e-07 60.8 63 52.4
Potri.001G217500 Populus trichocarpa HOM05D008514 ORTHO05D010490 1.2e-07 60.8 120 36.7
Potri.009G020300 Populus trichocarpa HOM05D008514 ORTHO05D010490 1.5e-07 60.5 125 36.8
Lj3g0020405 Lotus japonicus HOM05D008514 ORTHO05D010490 2.0e-07 60.1 124 41.9
Nn2g14299 Nelumbo nucifera HOM05D008514 ORTHO05D010490 3.4e-07 59.3 90 42.2
COL.COLO4_10193 Corchorus olitorius HOM05D008514 ORTHO05D010490 5.7e-07 58.5 111 39.6
ClCG01G011530 Citrullus lanatus HOM05D029204 ORTHO05D010490 9.8e-07 57.8 56 55.4
MELO3C035640.2 Cucumis melo HOM05D029204 ORTHO05D010490 1.7e-06 57.0 49 59.2
Peaxi162Scf00429g00081 Petunia axillaris HOM05D008514 ORTHO05D010490 1.7e-06 57.0 74 44.6
TAR633G2191 Trochodendron aralioides HOM05D008514 ORTHO05D010490 1.7e-06 57.0 75 48.0
Psat5g260000 Pisum sativum HOM05D008514 ORTHO05D010490 4.9e-06 55.5 124 35.5
Manes.11G165600 Manihot esculenta HOM05D008514 ORTHO05D010490 8.3e-06 54.7 124 36.3


User provided reference genes

Program Settings