Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009873 Carpinus fangiana HOM05D000020 ORTHO05D008792 5.8e-164 580.9 300 100.0
Cfa004118 Carpinus fangiana HOM05D000020 ORTHO05D008792 2.0e-92 343.2 235 80.0
Haze_15295 Corylus avellana HOM05D000020 ORTHO05D008792 2.1e-89 333.2 235 77.4
CiPaw.02G003200 Carya illinoinensis HOM05D000020 ORTHO05D008792 1.0e-64 251.1 259 58.3
Dinv04063 Davidia involucrata HOM05D000020 ORTHO05D008792 8.9e-48 194.9 257 46.7
Actinidia32833 Actinidia chinensis HOM05D000020 ORTHO05D008792 3.4e-47 193.0 253 45.8
Prupe.6G222300 Prunus persica HOM05D000020 ORTHO05D008792 2.2e-46 190.3 302 40.7
Rhsim08G0094300 Rhododendron simsii HOM05D000020 ORTHO05D008792 3.2e-45 186.4 255 44.7
vmacro18031 Vaccinium macrocarpon HOM05D000020 ORTHO05D008792 4.6e-44 182.6 268 43.7
CSS0008298 Camellia sinensis var. sinensis HOM05D000020 ORTHO05D008792 1.7e-43 180.6 269 45.4
Duzib147G1166 Durio zibethinus HOM05D000020 ORTHO05D008792 1.1e-42 177.9 270 40.7
FvH4_3g05400 Fragaria vesca HOM05D000020 ORTHO05D008792 7.3e-42 175.3 271 42.8
TAR381G0992 Trochodendron aralioides HOM05D000020 ORTHO05D008792 2.8e-41 173.3 239 44.8
Nn1g04586 Nelumbo nucifera HOM05D000020 ORTHO05D008792 3.1e-40 169.9 285 40.0
Manes.12G113200 Manihot esculenta HOM05D000020 ORTHO05D008792 1.2e-39 167.9 267 40.1
CSS0014102 Camellia sinensis var. sinensis HOM05D000020 ORTHO05D008792 2.6e-39 166.8 286 40.6
CiPaw.01G005800 Carya illinoinensis HOM05D000020 ORTHO05D008792 3.4e-39 166.4 203 50.7
TWI73G0781 Tripterygium wilfordii HOM05D000020 ORTHO05D008792 9.8e-39 164.9 288 40.3
GSVIVG01000128001 Vitis vinifera HOM05D000020 ORTHO05D008792 9.8e-39 164.9 251 43.4
Cc07_g06980 Coffea canephora HOM05D000020 ORTHO05D008792 1.3e-38 164.5 277 40.1
FvH4_1g17490 Fragaria vesca HOM05D000020 ORTHO05D008792 1.7e-38 164.1 260 40.8
Phvul.002G011900 Phaseolus vulgaris HOM05D000020 ORTHO05D008792 2.2e-38 163.7 252 44.8
VMungo1215G2852 Vigna mungo HOM05D000020 ORTHO05D008792 3.7e-38 162.9 249 44.6
FAN19G1049 Fragaria x ananassa HOM05D000020 ORTHO05D008792 4.9e-38 162.5 260 40.8
Glyma.01G193100 Glycine max HOM05D000020 ORTHO05D008792 6.4e-38 162.2 266 41.7
Gohir.D12G074500 Gossypium hirsutum HOM05D000020 ORTHO05D008792 6.4e-38 162.2 265 39.6
Gorai.008G082600 Gossypium raimondii HOM05D000020 ORTHO05D008792 8.3e-38 161.8 266 39.5
FAN28G2505 Fragaria x ananassa HOM05D000020 ORTHO05D008792 1.9e-37 160.6 245 42.0
CANSAT01G0929 Cannabis sativa HOM05D000020 ORTHO05D008792 5.4e-37 159.1 277 40.8
FAN23G0619 Fragaria x ananassa HOM05D000020 ORTHO05D008792 7.1e-37 158.7 260 40.4
Gohir.A12G076000 Gossypium hirsutum HOM05D000020 ORTHO05D008792 7.1e-37 158.7 266 39.1
Aqoxy5G00883 Aquilegia oxysepala HOM05D000020 ORTHO05D008792 1.2e-36 157.9 258 43.0
GSVIVG01017294001 Vitis vinifera HOM05D000020 ORTHO05D008792 1.6e-36 157.5 193 50.8
Thecc.01G071200 Theobroma cacao HOM05D000020 ORTHO05D008792 6.0e-36 155.6 229 41.0
FAN26G1836 Fragaria x ananassa HOM05D000020 ORTHO05D008792 3.9e-35 152.9 292 38.4
Cpa.g.sc6.30 Carica papaya HOM05D000020 ORTHO05D008792 2.8e-33 146.7 260 38.8
Glyma.11G048700 Glycine max HOM05D000020 ORTHO05D008792 8.1e-33 145.2 276 39.9
Ciclev10025640m.g Citrus clementina HOM05D000020 ORTHO05D008792 1.1e-32 144.8 229 39.7
Lalb_Chr09g0323541 Lupinus albus HOM05D000020 ORTHO05D008792 1.8e-32 144.1 252 40.5
PSO170G3604 Papaver somniferum HOM05D000020 ORTHO05D008792 3.4e-31 139.8 276 35.5
MSTRG.2823 Avicennia marina HOM05D000020 ORTHO05D008792 4.4e-31 139.4 287 36.2
DCAR_025792 Daucus carota HOM05D000020 ORTHO05D008792 4.4e-31 139.4 329 31.3
Lsat_1_v5_gn_3_87140 Lactuca sativa HOM05D000020 ORTHO05D008792 8.4e-30 135.2 242 39.7
CsaV3_2G016560 Cucumis sativus L. HOM05D000020 ORTHO05D008792 1.1e-29 134.8 259 38.2
PSO017G5045 Papaver somniferum HOM05D000020 ORTHO05D008792 3.2e-29 133.3 258 35.7
Haze_09886 Corylus avellana HOM05D001067 ORTHO05D000876 1.6e-28 131.0 194 50.5
Nitab4.5_0005389g0060 Nicotiana tabacum HOM05D000020 ORTHO05D008792 1.6e-28 131.0 242 38.8
MELO3C020866.2 Cucumis melo HOM05D000020 ORTHO05D008792 3.5e-28 129.8 260 36.9
Aqoxy6G02669 Aquilegia oxysepala HOM05D000020 ORTHO05D008792 3.0e-27 126.7 242 38.0
Oeu014238.1 Olea europaea HOM05D000020 ORTHO05D008792 3.0e-27 126.7 256 38.7
Peaxi162Scf00118g02017 Petunia axillaris HOM05D000020 ORTHO05D008792 3.0e-27 126.7 246 36.6
Lj2g0005581 Lotus japonicus HOM05D000020 ORTHO05D008792 3.9e-27 126.3 202 42.1
CAN.G278.9 Capsicum annuum HOM05D000020 ORTHO05D008792 1.9e-26 124.0 244 37.7
Atru.chr3.152 Acer truncatum HOM05D000020 ORTHO05D008792 2.5e-26 123.6 281 37.7
Atru.chr3.181 Acer truncatum HOM05D000020 ORTHO05D008792 2.5e-26 123.6 281 37.7
Nitab4.5_0001417g0100 Nicotiana tabacum HOM05D000020 ORTHO05D008792 5.6e-26 122.5 267 36.0
Medtr5g015720 Medicago truncatula HOM05D000020 ORTHO05D008792 9.6e-26 121.7 289 34.6
Lsat_1_v5_gn_4_160880 Lactuca sativa HOM05D000020 ORTHO05D008792 1.3e-22 111.3 228 34.6
Ca_24704_v3 Cicer arietinum L. HOM05D000020 ORTHO05D008792 1.9e-21 107.5 260 35.0
Sopen03g007900 Solanum pennellii HOM05D000020 ORTHO05D008792 1.9e-21 107.5 277 33.6
Hund13944 Selenicereus undatus HOM05D000020 ORTHO05D008792 2.4e-21 107.1 238 36.1
arahy.Tifrunner.gnm1.ann1.L3LV8Q Arachis hypogaea HOM05D000020 ORTHO05D008792 3.2e-21 106.7 258 33.7
arahy.Tifrunner.gnm1.ann1.8AEA8E Arachis hypogaea HOM05D000020 ORTHO05D008792 7.1e-21 105.5 287 35.2
ClCG02G012430 Citrullus lanatus HOM05D000020 ORTHO05D008792 7.1e-21 105.5 261 34.1
HanXRQChr15g0472691 Helianthus annuus HOM05D000020 ORTHO05D008792 9.3e-21 105.1 237 37.1
EL10Ac6g15633 Beta vulgaris HOM05D000020 ORTHO05D008792 2.1e-20 104.0 278 32.7
Sed0022820 Sechium edule HOM05D000020 ORTHO05D008792 2.1e-20 104.0 243 33.3
RcHm_v2.0_Chr2g0107721 Rosa chinensis HOM05D000020 ORTHO05D008792 2.7e-20 103.6 154 42.9
Ah.03g140420 Amaranthus hybridus HOM05D000020 ORTHO05D008792 6.0e-20 102.4 247 36.4
MD02G1183900 Malus domestica HOM05D000020 ORTHO05D008792 1.7e-19 100.9 292 32.2
TPR.G20947 Trifolium pratense HOM05D000020 ORTHO05D008792 1.7e-19 100.9 258 32.2
PGSC0003DMG400014878 Solanum tuberosum HOM05D000020 ORTHO05D008792 2.3e-19 100.5 251 34.7
unitig_0.g545 Utricularia gibba HOM05D000020 ORTHO05D008792 3.9e-19 99.8 255 33.7
THA.LOC104821226 Tarenaya hassleriana HOM05D000020 ORTHO05D008792 6.6e-19 99.0 265 32.1
Oeu013300.3 Olea europaea HOM05D000020 ORTHO05D008792 8.7e-19 98.6 236 36.0
MD15G1295500 Malus domestica HOM05D000020 ORTHO05D008792 3.3e-18 96.7 271 34.3
arahy.Tifrunner.gnm1.ann1.AGSV49 Arachis hypogaea HOM05D000020 ORTHO05D008792 4.3e-18 96.3 244 36.9
arahy.Tifrunner.gnm1.ann1.N7392N Arachis hypogaea HOM05D000020 ORTHO05D008792 4.3e-18 96.3 244 37.3
ATR0208G019 Amborella trichopoda HOM05D000020 ORTHO05D008792 2.8e-17 93.6 298 29.5
AUR62040252 Chenopodium quinoa HOM05D000020 ORTHO05D008792 1.1e-16 91.7 218 31.7
HanXRQChr11g0323181 Helianthus annuus HOM05D000020 ORTHO05D008792 2.4e-16 90.5 269 30.9
SalBow3G0946 Salvia bowleyana HOM05D000020 ORTHO05D008792 4.0e-16 89.7 234 34.6
SalBow3G3293 Salvia bowleyana HOM05D000020 ORTHO05D008792 4.0e-16 89.7 234 34.2
AUR62003994 Chenopodium quinoa HOM05D000020 ORTHO05D008792 1.2e-15 88.2 220 32.7
FAN16G0589 Fragaria x ananassa HOM05D000020 ORTHO05D008792 2.6e-15 87.0 262 31.7
PGR004G1948 Punica granatum HOM05D000020 ORTHO05D008792 7.6e-15 85.5 222 34.7
SGA_v2.0_scaffold15G07443 Striga asiatica HOM05D000020 ORTHO05D008792 9.9e-15 85.1 226 33.6
AL8G43840 Arabidopsis lyrata HOM05D000020 ORTHO05D008792 4.9e-14 82.8 235 29.4
AT5G67460 Arabidopsis thaliana HOM05D000020 ORTHO05D008792 6.4e-14 82.4 237 29.1
Migut.H00358 Erythranthe guttata HOM05D000020 ORTHO05D008792 1.4e-13 81.3 218 33.0
THA.LOC104819260 Tarenaya hassleriana HOM05D000020 ORTHO05D008792 2.4e-13 80.5 293 31.1
A02p44180 Brassica napus HOM05D000020 ORTHO05D008792 5.4e-13 79.3 229 30.1
BraA02t09341Z Brassica rapa HOM05D000020 ORTHO05D008792 7.1e-13 79.0 221 30.8
C02p64460 Brassica napus HOM05D000020 ORTHO05D008792 1.6e-12 77.8 229 30.1
BolC2t12510H Brassica oleracea HOM05D000020 ORTHO05D008792 1.6e-12 77.8 229 30.1
BcaC03g18371 Brassica carinata HOM05D000020 ORTHO05D008792 2.1e-12 77.4 229 30.1
Carub.0008s2701 Capsella rubella HOM05D000020 ORTHO05D008792 2.1e-12 77.4 224 27.2
Sc16g0002990 Simmondsia chinensis HOM05D000020 ORTHO05D008792 2.7e-12 77.0 215 32.1
Aa31LG1G16020 Aethionema arabicum HOM05D000020 ORTHO05D008792 1.1e-10 71.6 207 31.4
Thhalv10004376m.g Eutrema salsugineum HOM05D000020 ORTHO05D008792 4.3e-10 69.7 197 29.4
CDE01G0233 Ceratophyllum demersum HOM05D000020 ORTHO05D008792 5.6e-10 69.3 205 30.2
CARHR280130 Cardamine hirsuta HOM05D000020 ORTHO05D008792 7.4e-10 68.9 232 30.2
Sp2g29190 Schrenkiella parvula HOM05D000020 ORTHO05D008792 6.2e-09 65.9 229 27.9
SEGI_35009 Sequoiadendron giganteum HOM05D000020 ORTHO05D002192 1.1e-08 65.1 135 34.1
HPP92_006069 Vanilla planifolia HOM05D000020 ORTHO05D008792 1.8e-08 64.3 58 51.7
COL.COLO4_11562 Corchorus olitorius HOM05D000020 ORTHO05D008792 4.0e-08 63.2 168 32.7
Actinidia18418 Actinidia chinensis HOM05D000020 ORTHO05D008792 6.9e-08 62.4 46 60.9
HPP92_006073 Vanilla planifolia HOM05D000020 ORTHO05D008792 1.2e-07 61.6 69 44.9
ECA232G0532 Erigeron canadensis HOM05D000020 ORTHO05D008792 6.4e-06 55.8 122 33.6
Oeu049058.1 Olea europaea HOM05D000020 ORTHO05D002192 6.4e-06 55.8 127 31.5
ClCG09G011500 Citrullus lanatus HOM05D000020 ORTHO05D002192 8.4e-06 55.5 161 28.0


User provided reference genes

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