Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009777 Carpinus fangiana HOM05D004378 ORTHO05D005269 5.2e-193 677.6 343 100.0
Haze_23143 Corylus avellana HOM05D004378 ORTHO05D005269 2.9e-180 635.2 331 97.0
CiPaw.14G118500 Carya illinoinensis HOM05D004378 ORTHO05D005269 4.6e-157 558.1 333 84.4
QL01p004640 Quercus lobata HOM05D004378 ORTHO05D005269 8.1e-154 547.4 336 81.5
Atru.chr3.2709 Acer truncatum HOM05D004378 ORTHO05D005269 1.1e-153 547.0 334 82.9
Prupe.4G250000 Prunus persica HOM05D004378 ORTHO05D005269 5.2e-153 544.7 322 85.1
CANSAT54G1532 Cannabis sativa HOM05D004378 ORTHO05D005269 5.8e-152 541.2 339 81.4
CiPaw.13G159900 Carya illinoinensis HOM05D004378 ORTHO05D005269 9.9e-152 540.4 323 83.6
Dinv22174 Davidia involucrata HOM05D004378 ORTHO05D005269 2.2e-151 539.3 337 82.2
CSS0043718 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 8.3e-151 537.3 320 84.1
Manes.06G163800 Manihot esculenta HOM05D004378 ORTHO05D005269 2.4e-150 535.8 331 81.0
Potri.009G052800 Populus trichocarpa HOM05D004378 ORTHO05D005269 6.0e-149 531.2 325 82.5
Lj6g0003660 Lotus japonicus HOM05D004378 ORTHO05D005269 7.8e-149 530.8 336 80.4
COL.COLO4_07579 Corchorus olitorius HOM05D004378 ORTHO05D005269 1.7e-148 529.6 310 86.1
Potri.001G257500 Populus trichocarpa HOM05D004378 ORTHO05D005269 2.3e-148 529.3 338 79.6
Sabra16G0157500 Salix brachista HOM05D004378 ORTHO05D005269 8.6e-148 527.3 338 79.3
TWI34G1172 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 8.6e-148 527.3 326 81.9
Hma1.2p1_0368F.1_g137300 Hydrangea macrophylla HOM05D004378 ORTHO05D005269 1.1e-147 526.9 302 86.8
TWI60G1037 Tripterygium wilfordii HOM05D004378 ORTHO05D005269 1.1e-147 526.9 330 80.3
Duzib168G0314 Durio zibethinus HOM05D004378 ORTHO05D005269 1.5e-147 526.6 327 82.0
TPR.G14725 Trifolium pratense HOM05D004378 ORTHO05D005269 2.5e-147 525.8 320 81.6
GSVIVG01025251001 Vitis vinifera HOM05D004378 ORTHO05D005269 2.5e-147 525.8 335 80.6
arahy.Tifrunner.gnm1.ann1.B78H3K Arachis hypogaea HOM05D004378 ORTHO05D005269 3.3e-147 525.4 339 78.8
arahy.Tifrunner.gnm1.ann1.YL0VRD Arachis hypogaea HOM05D004378 ORTHO05D005269 7.3e-147 524.2 339 78.8
Nn7g36225 Nelumbo nucifera HOM05D004378 ORTHO05D005269 9.5e-147 523.9 334 79.6
Actinidia16337 Actinidia chinensis HOM05D004378 ORTHO05D005269 2.8e-146 522.3 329 80.5
RcHm_v2.0_Chr5g0052271 Rosa chinensis HOM05D004378 ORTHO05D005269 2.8e-146 522.3 338 79.0
Ca_14874_v3 Cicer arietinum L. HOM05D004378 ORTHO05D005269 3.6e-146 521.9 336 78.9
Gohir.A08G013900 Gossypium hirsutum HOM05D004378 ORTHO05D005269 6.2e-146 521.2 331 80.1
Gohir.D08G024400 Gossypium hirsutum HOM05D004378 ORTHO05D005269 6.2e-146 521.2 331 80.1
Gorai.004G019800 Gossypium raimondii HOM05D004378 ORTHO05D005269 6.2e-146 521.2 331 80.1
Duzib150G1120 Durio zibethinus HOM05D004378 ORTHO05D005269 8.1e-146 520.8 301 85.7
Medtr3g061490 Medicago truncatula HOM05D004378 ORTHO05D005269 8.1e-146 520.8 335 79.1
Thecc.09G234500 Theobroma cacao HOM05D004378 ORTHO05D005269 2.4e-145 519.2 310 83.2
Glyma.08G336000 Glycine max HOM05D004378 ORTHO05D005269 4.0e-145 518.5 334 79.9
MD11G1192300 Malus domestica HOM05D004378 ORTHO05D005269 5.2e-145 518.1 342 77.2
Sed0026402 Sechium edule HOM05D004378 ORTHO05D005269 5.2e-145 518.1 330 78.8
FAN25G2048 Fragaria x ananassa HOM05D004378 ORTHO05D005269 6.8e-145 517.7 340 78.8
FAN11G1994 Fragaria x ananassa HOM05D004378 ORTHO05D005269 1.2e-144 516.9 340 78.8
Nn2g15350 Nelumbo nucifera HOM05D004378 ORTHO05D005269 1.2e-144 516.9 339 77.0
Ciclev10015746m.g Citrus clementina HOM05D004378 ORTHO05D005269 7.6e-144 514.2 325 80.0
FAN16G3181 Fragaria x ananassa HOM05D004378 ORTHO05D005269 7.6e-144 514.2 334 79.6
FvH4_3g28770 Fragaria vesca HOM05D004378 ORTHO05D005269 1.3e-143 513.5 338 78.7
Actinidia06909 Actinidia chinensis HOM05D004378 ORTHO05D005269 2.2e-143 512.7 309 81.2
Cc01_g04470 Coffea canephora HOM05D004378 ORTHO05D005269 2.2e-143 512.7 334 78.4
VMungo0540G0714 Vigna mungo HOM05D004378 ORTHO05D005269 2.9e-143 512.3 328 78.7
Rhsim13G0220800 Rhododendron simsii HOM05D004378 ORTHO05D005269 3.8e-143 511.9 320 80.0
Sabra09G0038500 Salix brachista HOM05D004378 ORTHO05D005269 4.9e-143 511.5 383 70.5
Lalb_Chr15g0082531 Lupinus albus HOM05D004378 ORTHO05D005269 6.4e-143 511.1 327 78.3
ClCG03G013210 Citrullus lanatus HOM05D004378 ORTHO05D005269 5.4e-142 508.1 330 78.5
Phvul.006G062100 Phaseolus vulgaris HOM05D004378 ORTHO05D005269 1.2e-141 506.9 329 78.4
MELO3C015197.2 Cucumis melo HOM05D004378 ORTHO05D005269 1.6e-141 506.5 328 78.4
DCAR_030049 Daucus carota HOM05D004378 ORTHO05D005269 1.6e-141 506.5 334 78.1
Glyma.18G071100 Glycine max HOM05D004378 ORTHO05D005269 1.6e-141 506.5 334 77.5
Oeu001481.2 Olea europaea HOM05D004378 ORTHO05D005269 4.6e-141 505.0 330 77.0
TAR369G0513 Trochodendron aralioides HOM05D004378 ORTHO05D005269 6.0e-141 504.6 328 78.4
CsaV3_1G042790 Cucumis sativus L. HOM05D004378 ORTHO05D005269 2.3e-140 502.7 330 77.9
CSS0001002 Camellia sinensis var. sinensis HOM05D004378 ORTHO05D005269 2.5e-139 499.2 321 79.8
MSTRG.18430 Avicennia marina HOM05D004378 ORTHO05D005269 3.3e-139 498.8 292 84.9
Peaxi162Scf00004g02527 Petunia axillaris HOM05D004378 ORTHO05D005269 3.3e-139 498.8 338 75.7
MBI04_g36075_MAGBIO Magnolia biondii HOM05D004378 ORTHO05D005269 4.3e-139 498.4 336 74.4
Migut.D00605 Erythranthe guttata HOM05D004378 ORTHO05D005269 5.6e-139 498.0 321 77.9
Lalb_Chr18g0050451 Lupinus albus HOM05D004378 ORTHO05D005269 2.8e-138 495.7 330 76.4
Psat5g163880 Pisum sativum HOM05D004378 ORTHO05D005269 4.7e-138 495.0 330 74.8
Nitab4.5_0000023g0700 Nicotiana tabacum HOM05D004378 ORTHO05D005269 1.1e-137 493.8 333 74.8
HanXRQChr13g0401501 Helianthus annuus HOM05D004378 ORTHO05D005269 1.4e-137 493.4 331 76.4
Peaxi162Scf00032g00327 Petunia axillaris HOM05D004378 ORTHO05D005269 5.3e-137 491.5 333 74.5
CAN.G1204.2 Capsicum annuum HOM05D004378 ORTHO05D005269 6.9e-137 491.1 328 75.3
Migut.N02321 Erythranthe guttata HOM05D004378 ORTHO05D005269 6.9e-137 491.1 337 74.5
Eucgr.J00761 Eucalyptus grandis HOM05D004378 ORTHO05D005269 1.2e-136 490.3 322 76.1
ECA233G1578 Erigeron canadensis HOM05D004378 ORTHO05D005269 1.5e-136 490.0 292 81.8
Oeu016680.1 Olea europaea HOM05D004378 ORTHO05D005269 1.5e-136 490.0 336 73.8
PGSC0003DMG400007339 Solanum tuberosum HOM05D004378 ORTHO05D005269 1.3e-135 486.9 331 74.9
SGA_v2.0_scaffold247G44883 Striga asiatica HOM05D004378 ORTHO05D005269 6.4e-135 484.6 326 76.1
HanXRQChr02g0051301 Helianthus annuus HOM05D004378 ORTHO05D005269 8.4e-135 484.2 289 82.4
Nitab4.5_0002786g0020 Nicotiana tabacum HOM05D004378 ORTHO05D005269 8.4e-135 484.2 347 71.5
CDE05G0340 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 1.9e-134 483.0 332 73.5
Sopen11g025430 Solanum pennellii HOM05D004378 ORTHO05D005269 1.9e-134 483.0 331 75.2
PGR119G1351 Punica granatum HOM05D004378 ORTHO05D005269 4.2e-134 481.9 332 75.3
Aqoxy1G00284 Aquilegia oxysepala HOM05D004378 ORTHO05D005269 7.1e-134 481.1 332 72.6
CDE05G0884 Ceratophyllum demersum HOM05D004378 ORTHO05D005269 7.1e-134 481.1 301 78.1
Sopen01g003990 Solanum pennellii HOM05D004378 ORTHO05D005269 2.3e-132 476.1 333 73.6
Solyc01g008470.3 Solanum lycopersicum HOM05D004378 ORTHO05D005269 5.1e-132 474.9 333 73.3
PGSC0003DMG400010703 Solanum tuberosum HOM05D004378 ORTHO05D005269 8.7e-132 474.2 334 72.8
SGA_v2.0_scaffold8G04586 Striga asiatica HOM05D004378 ORTHO05D005269 2.5e-131 472.6 315 74.9
Manes.14G003200 Manihot esculenta HOM05D004378 ORTHO05D005269 2.1e-130 469.5 302 79.8
Lsat_1_v5_gn_2_31060 Lactuca sativa HOM05D004378 ORTHO05D005269 2.8e-130 469.2 297 78.1
EL10Ac4g10244 Beta vulgaris HOM05D004378 ORTHO05D005269 6.2e-130 468.0 335 70.4
Lj2A629T47 Lonicera japonica HOM05D004378 ORTHO05D005269 8.1e-130 467.6 340 70.9
THA.LOC104799106 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 3.1e-129 465.7 318 73.6
Dinv36255 Davidia involucrata HOM05D004378 ORTHO05D005269 5.8e-128 461.5 251 90.4
AUR62000126 Chenopodium quinoa HOM05D004378 ORTHO05D005269 1.7e-127 459.9 338 68.9
unitig_699.g19136 Utricularia gibba HOM05D004378 ORTHO05D005269 2.9e-127 459.1 330 71.5
Lsat_1_v5_gn_6_26200 Lactuca sativa HOM05D004378 ORTHO05D005269 4.9e-127 458.4 321 72.6
PSO339G6315 Papaver somniferum HOM05D004378 ORTHO05D005269 2.4e-126 456.1 325 70.2
PSO384G0525 Papaver somniferum HOM05D004378 ORTHO05D005269 9.3e-126 454.1 324 70.4
Nitab4.5_0001587g0030 Nicotiana tabacum HOM05D004378 ORTHO05D005269 4.6e-125 451.8 323 72.1
Nitab4.5_0002741g0140 Nicotiana tabacum HOM05D004378 ORTHO05D005269 4.6e-125 451.8 318 72.6
Ah.06g194140 Amaranthus hybridus HOM05D004378 ORTHO05D005269 7.9e-125 451.1 334 67.1
THA.LOC104816878 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 1.3e-124 450.3 324 71.3
Aa31LG10G3540 Aethionema arabicum HOM05D004378 ORTHO05D005269 1.8e-124 449.9 279 78.9
unitig_27.g24995 Utricularia gibba HOM05D004378 ORTHO05D005269 2.3e-124 449.5 329 70.5
CARHR096800 Cardamine hirsuta HOM05D004378 ORTHO05D005269 4.3e-123 445.3 312 72.1
Os02g0435000 Oryza sativa ssp. japonica HOM05D004378 ORTHO05D005269 1.6e-122 443.4 303 70.3
THA.LOC104824616 Tarenaya hassleriana HOM05D004378 ORTHO05D005269 3.7e-122 442.2 314 72.0
ATR0332G071 Amborella trichopoda HOM05D004378 ORTHO05D005269 1.8e-121 439.9 324 69.1
Hund22027 Selenicereus undatus HOM05D004378 ORTHO05D005269 1.8e-121 439.9 325 67.7
Zm00001eb064100 Zea mays HOM05D004378 ORTHO05D005269 4.0e-121 438.7 336 65.2
BraA05t21666Z Brassica rapa HOM05D004378 ORTHO05D005269 1.5e-120 436.8 323 69.7
BcaB04g20618 Brassica carinata HOM05D004378 ORTHO05D005269 3.4e-120 435.6 323 69.0
A05p27790 Brassica napus HOM05D004378 ORTHO05D005269 4.5e-120 435.3 323 69.7
BcaB06g26169 Brassica carinata HOM05D004378 ORTHO05D005269 9.9e-120 434.1 327 69.4
Zm00001eb210940 Zea mays HOM05D004378 ORTHO05D005269 2.2e-119 433.0 332 64.5
Sp3g18950 Schrenkiella parvula HOM05D004378 ORTHO05D005269 4.9e-119 431.8 323 69.3
A01p33870 Brassica napus HOM05D004378 ORTHO05D005269 1.1e-118 430.6 318 69.2
C05p43130 Brassica napus HOM05D004378 ORTHO05D005269 1.4e-118 430.3 323 68.7
BolC5t33043H Brassica oleracea HOM05D004378 ORTHO05D005269 1.4e-118 430.3 323 68.7
AT3G20920 Arabidopsis thaliana HOM05D004378 ORTHO05D005269 1.9e-118 429.9 298 71.8
BraA01t03495Z Brassica rapa HOM05D004378 ORTHO05D005269 1.9e-118 429.9 318 68.9
Sed0000917 Sechium edule HOM05D004378 ORTHO05D005269 1.9e-118 429.9 343 67.6
Aa31LG8G7740 Aethionema arabicum HOM05D004378 ORTHO05D005269 5.5e-118 428.3 326 67.5
Carub.0003s2090 Capsella rubella HOM05D004378 ORTHO05D005269 9.3e-118 427.6 326 67.8
Thhalv10021027m.g Eutrema salsugineum HOM05D004378 ORTHO05D005269 2.7e-117 426.0 319 69.0
A03p41980 Brassica napus HOM05D004378 ORTHO05D005269 3.5e-117 425.6 323 67.8
BraA03t13351Z Brassica rapa HOM05D004378 ORTHO05D005269 3.5e-117 425.6 323 67.8
BcaC01g03532 Brassica carinata HOM05D004378 ORTHO05D005269 4.6e-117 425.2 323 67.8
C03p51390 Brassica napus HOM05D004378 ORTHO05D005269 4.6e-117 425.2 323 67.8
BolC3t17425H Brassica oleracea HOM05D004378 ORTHO05D005269 6.0e-117 424.9 330 67.0
HPP92_024875 Vanilla planifolia HOM05D004378 ORTHO05D005269 1.1e-115 420.6 323 62.2
BcaB06g26167 Brassica carinata HOM05D004378 ORTHO05D005269 2.5e-110 402.9 293 69.6
Actinidia06345 Actinidia chinensis HOM05D004378 ORTHO05D005269 3.2e-110 402.5 249 79.5
vmacro04153 Vaccinium macrocarpon HOM05D004378 ORTHO05D005269 7.9e-109 397.9 472 50.8
SHI29790 Sapria himalayana HOM05D004378 ORTHO05D005269 2.5e-107 392.9 336 64.9
SEGI_31334 Sequoiadendron giganteum HOM05D004378 ORTHO05D005269 5.7e-107 391.7 325 61.5
AL3G34880 Arabidopsis lyrata HOM05D004378 ORTHO05D005269 5.9e-104 381.7 267 70.8
BcaC05g28205 Brassica carinata HOM05D004378 ORTHO05D005269 2.5e-102 376.3 322 62.4
Lj1A330G22 Lonicera japonica HOM05D004378 ORTHO05D005269 8.8e-100 367.9 282 70.2
Cpa.g.sc84.48 Carica papaya HOM05D004378 ORTHO05D005269 2.5e-94 349.7 233 77.3
BolC1t04284H Brassica oleracea HOM05D004378 ORTHO05D005269 4.2e-94 349.0 258 67.4
SMO117G0234 Selaginella moellendorffii HOM05D004378 ORTHO05D005269 1.0e-92 344.4 316 56.6
MD03G1174500 Malus domestica HOM05D004378 ORTHO05D005269 7.4e-91 338.2 215 80.0
Mapoly0080s0045 Marchantia polymorpha HOM05D004378 ORTHO05D005269 4.8e-90 335.5 328 53.4
FAN21G1987 Fragaria x ananassa HOM05D004378 ORTHO05D005269 3.2e-86 322.8 226 76.5
CAN.G494.6 Capsicum annuum HOM05D004378 ORTHO05D005269 2.1e-85 320.1 225 74.2
AagrBONN_evm.TU.Sc2ySwM_228.3794 Anthoceros agrestis HOM05D004378 ORTHO05D005269 4.7e-85 318.9 328 53.7
Pp3c16_12820 Physcomitrium patens HOM05D004378 ORTHO05D005269 1.8e-84 317.0 270 59.3
MSTRG.21374 Avicennia marina HOM05D004378 ORTHO05D005269 4.4e-83 312.4 204 79.9
Lalb_Chr20g0115221 Lupinus albus HOM05D004378 ORTHO05D005269 1.6e-80 303.9 190 78.9
Pp3c27_5530 Physcomitrium patens HOM05D004378 ORTHO05D005269 1.3e-79 300.8 336 49.1
Sc09g0000750 Simmondsia chinensis HOM05D004378 ORTHO05D005269 6.1e-77 292.0 174 79.9
Peaxi162Scf00004g02528 Petunia axillaris HOM05D004378 ORTHO05D005269 4.4e-75 285.8 262 59.5
CBR_g54322 Chara braunii HOM05D004378 ORTHO05D005269 3.1e-65 253.1 281 47.3
TAR623G1006 Trochodendron aralioides HOM05D004378 ORTHO05D005269 1.2e-53 214.5 181 66.9
MSTRG.21373 Avicennia marina HOM05D004378 ORTHO05D005269 5.6e-46 189.1 104 84.6
TAR057G0002 Trochodendron aralioides HOM05D004378 ORTHO05D005269 7.3e-46 188.7 105 84.8
AUR62019307 Chenopodium quinoa HOM05D004378 ORTHO05D005269 2.3e-44 183.7 169 58.0
Lalb_Chr20g0115231 Lupinus albus HOM05D004378 ORTHO05D005269 1.5e-43 181.0 106 78.3
SHI32640 Sapria himalayana HOM05D004378 ORTHO05D000001 3.0e-39 166.8 90 87.8
Sopen01g004010 Solanum pennellii HOM05D004378 ORTHO05D005269 2.2e-34 150.6 108 72.2
Solyc03g096225.1 Solanum lycopersicum HOM05D004378 ORTHO05D005269 4.2e-25 119.8 92 60.9
Cre02.g084050 Chlamydomonas reinhardtii HOM05D004378 ORTHO05D005269 6.0e-24 115.9 270 28.5
MCO14G148 Micromonas commoda HOM05D004378 ORTHO05D005269 4.2e-17 93.2 324 25.6


User provided reference genes

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