Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009537 Carpinus fangiana HOM05D000036 ORTHO05D024878 7.8e-124 447.2 235 100.0
Cfa009541 Carpinus fangiana HOM05D000036 ORTHO05D024878 4.5e-71 271.9 157 94.9
Haze_22926 Corylus avellana HOM05D000036 ORTHO05D024878 8.3e-33 144.8 156 59.6
CiPaw.07G035500 Carya illinoinensis HOM05D000036 ORTHO05D024878 1.6e-31 140.6 154 54.5
Haze_03994 Corylus avellana HOM05D000036 ORTHO05D000441 1.9e-29 133.7 161 50.9
QL01p003260 Quercus lobata HOM05D000036 ORTHO05D000441 2.1e-28 130.2 157 51.0
Cfa006761 Carpinus fangiana HOM05D000036 ORTHO05D000441 1.3e-25 120.9 161 49.7
EL10Ac3g06254 Beta vulgaris HOM05D000036 ORTHO05D000441 4.0e-11 72.8 161 31.7
AUR62002556 Chenopodium quinoa HOM05D000036 ORTHO05D000441 3.4e-10 69.7 161 31.1
Hma1.2p1_2234F.1_g317680 Hydrangea macrophylla HOM05D000036 ORTHO05D000441 7.5e-10 68.6 158 32.3
Medtr7g111560 Medicago truncatula HOM05D000036 ORTHO05D000441 7.5e-10 68.6 162 29.6
Migut.O00401 Erythranthe guttata HOM05D000036 ORTHO05D000441 2.2e-09 67.0 158 28.5
AUR62029976 Chenopodium quinoa HOM05D000036 ORTHO05D000441 3.7e-09 66.2 161 29.2
Nitab4.5_0004046g0030 Nicotiana tabacum HOM05D000036 ORTHO05D000441 4.9e-09 65.9 171 33.9
Cpa.g.sc146.24 Carica papaya HOM05D000036 ORTHO05D000441 6.4e-09 65.5 153 30.1
Glyma.10G009000 Glycine max HOM05D000036 ORTHO05D000441 6.4e-09 65.5 157 30.6
Manes.07G013500 Manihot esculenta HOM05D000036 ORTHO05D000441 1.9e-08 63.9 153 32.0
Peaxi162Scf00126g00107 Petunia axillaris HOM05D000036 ORTHO05D000441 1.9e-08 63.9 167 31.7
Lj3A840T135 Lonicera japonica HOM05D000036 ORTHO05D000441 2.4e-08 63.5 163 28.8
Glyma.19G225700 Glycine max HOM05D000036 ORTHO05D000441 3.2e-08 63.2 168 32.1
Nn3g21916 Nelumbo nucifera HOM05D000036 ORTHO05D000441 3.2e-08 63.2 161 30.4
QL06p014211 Quercus lobata HOM05D000036 ORTHO05D000441 3.2e-08 63.2 160 28.1
Nitab4.5_0001334g0070 Nicotiana tabacum HOM05D000036 ORTHO05D000441 4.1e-08 62.8 172 33.1
PGSC0003DMG400013067 Solanum tuberosum HOM05D000036 ORTHO05D000441 4.1e-08 62.8 167 32.3
Haze_04085 Corylus avellana HOM05D000036 ORTHO05D024878 5.4e-08 62.4 62 62.9
Glyma.02G008400 Glycine max HOM05D000036 ORTHO05D000441 5.4e-08 62.4 161 29.8
TPR.G1670 Trifolium pratense HOM05D000036 ORTHO05D000441 5.4e-08 62.4 162 29.0
Atru.chr4.3147 Acer truncatum HOM05D000036 ORTHO05D000441 9.2e-08 61.6 158 28.5
VMungo1383G2508 Vigna mungo HOM05D000036 ORTHO05D000441 9.2e-08 61.6 161 31.7
Duzib268G0064 Durio zibethinus HOM05D000036 ORTHO05D000441 1.2e-07 61.2 158 29.7
Solyc01g057220.3 Solanum lycopersicum HOM05D000036 ORTHO05D000441 1.2e-07 61.2 167 31.7
TWI14G1212 Tripterygium wilfordii HOM05D000036 ORTHO05D000441 1.2e-07 61.2 154 30.5
MD16G1136400 Malus domestica HOM05D000036 ORTHO05D000441 1.6e-07 60.8 157 27.4
Nn4g26714 Nelumbo nucifera HOM05D000036 ORTHO05D000441 1.6e-07 60.8 168 31.0
Rhsim03G0231900 Rhododendron simsii HOM05D000036 ORTHO05D000441 2.0e-07 60.5 161 31.1
Aqoxy6G01934 Aquilegia oxysepala HOM05D000036 ORTHO05D000441 2.7e-07 60.1 164 29.9
Phvul.001G217400 Phaseolus vulgaris HOM05D000036 ORTHO05D000441 2.7e-07 60.1 161 30.4
vmacro06294 Vaccinium macrocarpon HOM05D000036 ORTHO05D000441 2.7e-07 60.1 158 31.6
Nn4g25383 Nelumbo nucifera HOM05D000036 ORTHO05D000441 3.5e-07 59.7 168 31.0
Nn4g25384 Nelumbo nucifera HOM05D000036 ORTHO05D000441 3.5e-07 59.7 168 31.0
Duzib212G0644 Durio zibethinus HOM05D000036 ORTHO05D000441 4.6e-07 59.3 163 28.8
GSVIVG01017687001 Vitis vinifera HOM05D000036 ORTHO05D000441 4.6e-07 59.3 167 29.9
Nn4g25389 Nelumbo nucifera HOM05D000036 ORTHO05D000441 6.0e-07 58.9 168 31.5
Thecc.01G323800 Theobroma cacao HOM05D000036 ORTHO05D000441 6.0e-07 58.9 158 29.7
CANSAT25G0402 Cannabis sativa HOM05D000036 ORTHO05D000441 7.8e-07 58.5 167 28.1
Nitab4.5_0000222g0310 Nicotiana tabacum HOM05D000036 ORTHO05D000441 7.8e-07 58.5 164 31.1
CANSAT78G2329 Cannabis sativa HOM05D000036 ORTHO05D000441 1.0e-06 58.2 113 31.9
Lj1g0022006 Lotus japonicus HOM05D000036 ORTHO05D000441 1.0e-06 58.2 155 32.9
SalBow6G1755 Salvia bowleyana HOM05D000036 ORTHO05D000441 1.0e-06 58.2 157 30.6
CAN.G100.49 Capsicum annuum HOM05D000036 ORTHO05D000441 1.3e-06 57.8 155 30.3
Nitab4.5_0009914g0010 Nicotiana tabacum HOM05D000036 ORTHO05D000441 1.7e-06 57.4 164 30.5
Duzib133G1532 Durio zibethinus HOM05D000036 ORTHO05D000441 3.0e-06 56.6 158 26.6
arahy.Tifrunner.gnm1.ann1.FK2UP9 Arachis hypogaea HOM05D000036 ORTHO05D000441 3.9e-06 56.2 162 29.6
Dinv18019 Davidia involucrata HOM05D000036 ORTHO05D000441 3.9e-06 56.2 163 29.4
Nn4g25382 Nelumbo nucifera HOM05D000036 ORTHO05D000441 3.9e-06 56.2 166 28.9
Nn4g26702 Nelumbo nucifera HOM05D000036 ORTHO05D000441 3.9e-06 56.2 165 27.3
PGR004G2099 Punica granatum HOM05D000036 ORTHO05D000441 3.9e-06 56.2 165 27.9
arahy.Tifrunner.gnm1.ann1.SSN91Q Arachis hypogaea HOM05D000036 ORTHO05D000441 5.0e-06 55.8 162 29.6
CAN.G100.50 Capsicum annuum HOM05D000036 ORTHO05D000441 5.0e-06 55.8 164 29.3
Cfa001582 Carpinus fangiana HOM05D003924 ORTHO05D005216 6.6e-06 55.5 34 76.5
Nn4g26703 Nelumbo nucifera HOM05D000036 ORTHO05D000441 6.6e-06 55.5 166 29.5
Phvul.007G210400 Phaseolus vulgaris HOM05D000036 ORTHO05D000441 6.6e-06 55.5 160 28.8
Prupe.1G105400 Prunus persica HOM05D000036 ORTHO05D000441 6.6e-06 55.5 157 24.8
TPR.G3031 Trifolium pratense HOM05D000036 ORTHO05D000441 6.6e-06 55.5 160 28.1
Glyma.19G220600 Glycine max HOM05D000036 ORTHO05D000441 8.6e-06 55.1 157 29.3
PGSC0003DMG400005208 Solanum tuberosum HOM05D000036 ORTHO05D000441 8.6e-06 55.1 160 28.8
TWI59G0821 Tripterygium wilfordii HOM05D000036 ORTHO05D000441 8.6e-06 55.1 160 29.4


User provided reference genes

Program Settings