Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009399 Carpinus fangiana HOM05D007497 ORTHO05D009706 4.3e-275 950.7 470 100.0
CiPaw.05G105800 Carya illinoinensis HOM05D007497 ORTHO05D009706 2.8e-242 841.6 467 89.1
QL03p051279 Quercus lobata HOM05D007497 ORTHO05D009706 5.5e-238 827.4 461 87.6
Thecc.02G199900 Theobroma cacao HOM05D007497 ORTHO05D009706 8.0e-229 797.0 462 84.4
Ciclev10031387m.g Citrus clementina HOM05D007497 ORTHO05D009706 4.4e-227 791.2 466 82.6
TAR622G0177 Trochodendron aralioides HOM05D007497 ORTHO05D009706 1.3e-226 789.6 470 80.9
Hma1.2p1_0275F.1_g110530 Hydrangea macrophylla HOM05D007497 ORTHO05D009706 4.9e-226 787.7 470 80.4
Duzib052G0992 Durio zibethinus HOM05D007497 ORTHO05D009706 2.0e-224 782.3 471 81.1
CANSAT01G1986 Cannabis sativa HOM05D007497 ORTHO05D009706 1.3e-223 779.6 464 81.5
Atru.chr11.2380 Acer truncatum HOM05D007497 ORTHO05D009706 2.3e-223 778.9 466 80.0
CsaV3_4G002920 Cucumis sativus L. HOM05D007497 ORTHO05D009706 3.8e-223 778.1 467 82.0
Manes.13G007600 Manihot esculenta HOM05D007497 ORTHO05D009706 1.1e-222 776.5 461 81.6
Prupe.1G221400 Prunus persica HOM05D007497 ORTHO05D009706 1.9e-222 775.8 461 81.3
FvH4_4g23250 Fragaria vesca HOM05D007497 ORTHO05D009706 9.5e-222 773.5 467 78.6
CSS0041912 Camellia sinensis var. sinensis HOM05D007497 ORTHO05D009706 1.6e-221 772.7 466 79.2
Sed0000705 Sechium edule HOM05D007497 ORTHO05D009706 3.6e-221 771.5 469 80.6
PGR119G1254 Punica granatum HOM05D007497 ORTHO05D009706 8.0e-221 770.4 467 79.9
MD16G1124200 Malus domestica HOM05D007497 ORTHO05D009706 3.0e-220 768.5 461 80.5
Nn4g22236 Nelumbo nucifera HOM05D007497 ORTHO05D009706 4.0e-220 768.1 478 77.0
HanXRQChr12g0362231 Helianthus annuus HOM05D007497 ORTHO05D009706 6.8e-220 767.3 461 78.7
RcHm_v2.0_Chr4g0429611 Rosa chinensis HOM05D007497 ORTHO05D009706 8.9e-220 766.9 464 78.7
Gorai.002G022900 Gossypium raimondii HOM05D007497 ORTHO05D009706 1.5e-219 766.1 463 79.0
MBI07_g24745_MAGBIO Magnolia biondii HOM05D007497 ORTHO05D009706 2.0e-219 765.8 462 79.4
Gohir.D01G020400 Gossypium hirsutum HOM05D007497 ORTHO05D009706 2.6e-219 765.4 463 78.6
Phvul.007G001000 Phaseolus vulgaris HOM05D007497 ORTHO05D009706 5.8e-219 764.2 461 79.8
ECA233G4426 Erigeron canadensis HOM05D007497 ORTHO05D009706 4.9e-218 761.1 462 77.3
Glyma.20G249400 Glycine max HOM05D007497 ORTHO05D009706 1.1e-217 760.0 461 79.4
Lalb_Chr21g0307731 Lupinus albus HOM05D007497 ORTHO05D009706 1.8e-217 759.2 461 79.4
FAN12G1328 Fragaria x ananassa HOM05D007497 ORTHO05D009706 4.1e-217 758.1 497 74.0
Eucgr.H04604 Eucalyptus grandis HOM05D007497 ORTHO05D009706 7.0e-217 757.3 462 77.9
Lj5g0001280 Lotus japonicus HOM05D007497 ORTHO05D009706 7.0e-217 757.3 464 78.4
GSVIVG01000925001 Vitis vinifera HOM05D007497 ORTHO05D009706 7.0e-217 757.3 494 75.5
Migut.K01014 Erythranthe guttata HOM05D007497 ORTHO05D009706 1.3e-215 753.1 462 76.8
VMungo0720G2254 Vigna mungo HOM05D007497 ORTHO05D009706 3.0e-215 751.9 461 79.0
TPR.G8894 Trifolium pratense HOM05D007497 ORTHO05D009706 3.9e-215 751.5 461 78.3
FAN07G1017 Fragaria x ananassa HOM05D007497 ORTHO05D009706 6.6e-215 750.7 497 73.4
arahy.Tifrunner.gnm1.ann1.USIX8K Arachis hypogaea HOM05D007497 ORTHO05D009706 1.1e-214 750.0 461 78.1
FAN17G0169 Fragaria x ananassa HOM05D007497 ORTHO05D009706 1.9e-214 749.2 500 72.8
Lj1A600T68 Lonicera japonica HOM05D007497 ORTHO05D009706 2.5e-214 748.8 507 73.2
Hund06133 Selenicereus undatus HOM05D007497 ORTHO05D009706 4.7e-213 744.6 462 76.6
DCAR_024649 Daucus carota HOM05D007497 ORTHO05D009706 1.1e-212 743.4 463 78.6
Sabra01G0043200 Salix brachista HOM05D007497 ORTHO05D009706 3.1e-212 741.9 502 73.9
Lsat_1_v5_gn_8_147300 Lactuca sativa HOM05D007497 ORTHO05D009706 1.2e-211 740.0 467 74.9
Psat6g243880 Pisum sativum HOM05D007497 ORTHO05D009706 7.5e-211 737.3 467 76.2
Aqoxy5G03252 Aquilegia oxysepala HOM05D007497 ORTHO05D009706 2.2e-210 735.7 462 76.4
ATR0582G029 Amborella trichopoda HOM05D007497 ORTHO05D009706 9.2e-209 730.3 462 74.9
CDE02G2130 Ceratophyllum demersum HOM05D007497 ORTHO05D009706 1.2e-208 729.9 470 74.5
vmacro01041 Vaccinium macrocarpon HOM05D007497 ORTHO05D009706 3.5e-208 728.4 544 68.2
AUR62005664 Chenopodium quinoa HOM05D007497 ORTHO05D009706 9.5e-206 720.3 461 74.2
PSO478G2787 Papaver somniferum HOM05D007497 ORTHO05D009706 6.2e-205 717.6 493 71.8
Zm00001eb133110 Zea mays HOM05D007497 ORTHO05D009706 1.2e-203 713.4 470 73.4
SEGI_22503 Sequoiadendron giganteum HOM05D007497 ORTHO05D009706 2.2e-202 709.1 467 72.8
Peaxi162Scf00255g00215 Petunia axillaris HOM05D007497 ORTHO05D009706 2.5e-198 695.7 466 72.5
unitig_747.g21120 Utricularia gibba HOM05D007497 ORTHO05D009706 2.4e-196 689.1 496 67.1
Oeu058905.2 Olea europaea HOM05D007497 ORTHO05D009706 3.4e-195 685.3 535 64.5
arahy.Tifrunner.gnm1.ann1.03F5C5 Arachis hypogaea HOM05D007497 ORTHO05D009706 6.4e-194 681.0 402 80.8
Actinidia25110 Actinidia chinensis HOM05D007497 ORTHO05D009706 4.6e-192 674.9 468 72.4
MELO3C017750.2 Cucumis melo HOM05D007497 ORTHO05D009706 3.0e-191 672.2 393 83.5
Mapoly0028s0122 Marchantia polymorpha HOM05D007497 ORTHO05D009706 1.5e-187 659.8 460 67.0
SMO164G0003 Selaginella moellendorffii HOM05D007497 ORTHO05D009706 2.0e-187 659.4 459 66.7
Ca_11429_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 3.4e-187 658.7 400 79.2
Ca_29861_v3 Cicer arietinum L. HOM05D007497 ORTHO05D009706 3.4e-187 658.7 400 79.2
AagrBONN_evm.TU.Sc2ySwM_117.3575 Anthoceros agrestis HOM05D007497 ORTHO05D009706 9.9e-187 657.1 461 66.8
Nitab4.5_0004878g0020 Nicotiana tabacum HOM05D007497 ORTHO05D009706 9.9e-187 657.1 466 68.5
MSTRG.8029 Avicennia marina HOM05D007497 ORTHO05D009706 1.3e-186 656.8 407 75.9
Gohir.A01G021900 Gossypium hirsutum HOM05D007497 ORTHO05D009706 6.4e-186 654.4 386 81.3
Pp3c11_11180 Physcomitrium patens HOM05D007497 ORTHO05D009706 4.6e-184 648.3 461 67.7
Nitab4.5_0001771g0110 Nicotiana tabacum HOM05D007497 ORTHO05D009706 2.3e-183 646.0 467 67.7
Sc04g0010370 Simmondsia chinensis HOM05D007497 ORTHO05D009706 8.1e-181 637.5 460 68.5
AUR62028889 Chenopodium quinoa HOM05D007497 ORTHO05D009706 1.6e-176 623.2 415 72.3
ClCG07G015350 Citrullus lanatus HOM05D007497 ORTHO05D009706 1.0e-175 620.5 492 65.7
SGA_v2.0_scaffold228G43249 Striga asiatica HOM05D007497 ORTHO05D009706 9.6e-174 614.0 462 64.7
HPP92_024455 Vanilla planifolia HOM05D007497 ORTHO05D009706 1.6e-173 613.2 375 77.6
Rhsim12G0023000 Rhododendron simsii HOM05D007497 ORTHO05D009706 4.8e-173 611.7 468 66.0
Cc11_g17320 Coffea canephora HOM05D007497 ORTHO05D009706 6.4e-170 601.3 365 79.5
EL10Ac6g13550 Beta vulgaris HOM05D007497 ORTHO05D009706 1.7e-162 576.6 461 62.9
Dinv11708 Davidia involucrata HOM05D007497 ORTHO05D009706 1.8e-159 566.6 327 82.9
SalBow2G2186 Salvia bowleyana HOM05D007497 ORTHO05D009706 2.2e-154 549.7 368 73.4
Sopen01g005520 Solanum pennellii HOM05D007497 ORTHO05D009706 1.6e-152 543.5 333 78.1
Actinidia30617 Actinidia chinensis HOM05D007497 ORTHO05D009706 1.0e-146 524.2 373 72.4
Solyc01g009940.1 Solanum lycopersicum HOM05D007497 ORTHO05D009706 1.0e-122 444.5 268 78.4
Potri.001G060300 Populus trichocarpa HOM05D007497 ORTHO05D009706 1.4e-103 380.9 229 80.8
Haze_12459 Corylus avellana HOM05D007497 ORTHO05D009706 1.6e-88 330.9 176 92.6
Pp3s30_430 Physcomitrium patens HOM05D007497 ORTHO05D009706 4.2e-68 263.1 447 32.7
HanXRQChr12g0362241 Helianthus annuus HOM05D007497 ORTHO05D009706 3.3e-65 253.4 156 78.8
MD10G1063400 Malus domestica HOM05D007497 ORTHO05D009706 2.5e-57 227.3 235 55.3
Prupe.4G226800 Prunus persica HOM05D007497 ORTHO05D009706 2.2e-53 214.2 159 68.6
SalBow2G3560 Salvia bowleyana HOM05D007497 ORTHO05D009706 2.2e-45 187.6 118 72.0
Cre16.g679150 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D009706 9.1e-31 139.0 433 28.9
HPP92_024456 Vanilla planifolia HOM05D007497 ORTHO05D009706 2.0e-22 111.3 77 66.2
Cre03.g145267 Chlamydomonas reinhardtii HOM05D007497 ORTHO05D022249 1.7e-21 108.2 389 25.7
Cfa026587 Carpinus fangiana HOM05D007497 ORTHO05D022249 3.3e-17 94.0 342 25.4
MCO09G453 Micromonas commoda HOM05D007497 ORTHO05D009706 4.1e-15 87.0 496 24.6
MD13G1123400 Malus domestica HOM05D007497 ORTHO05D009706 1.3e-13 82.0 57 68.4
Pp3c24_8280 Physcomitrium patens HOM05D007497 ORTHO05D022249 6.1e-11 73.2 387 24.8
PRCOL_00006895 Prasinoderma coloniale HOM05D007497 ORTHO05D009706 1.7e-08 65.1 391 22.5
arahy.Tifrunner.gnm1.ann1.X4TTMB Arachis hypogaea HOM05D007497 ORTHO05D015410 3.1e-07 60.8 50 56.0
PRCOL_00001487 Prasinoderma coloniale HOM05D007497 ORTHO05D022249 2.7e-06 57.8 357 23.5


User provided reference genes

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