Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009396 Carpinus fangiana HOM05D006978 ORTHO05D008723 4.3e-200 701.0 341 100.0
CiPaw.05G106100 Carya illinoinensis HOM05D006978 ORTHO05D008723 2.2e-172 609.0 343 86.9
QL03p051315 Quercus lobata HOM05D006978 ORTHO05D008723 1.6e-170 602.8 344 85.8
Haze_12456 Corylus avellana HOM05D006978 ORTHO05D008723 1.1e-158 563.5 289 94.8
Dinv11704 Davidia involucrata HOM05D006978 ORTHO05D008723 3.3e-155 552.0 332 79.2
Ciclev10031990m.g Citrus clementina HOM05D006978 ORTHO05D008723 6.1e-154 547.7 338 79.0
Hma1.2p1_0065F.1_g034960 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 8.0e-154 547.4 339 77.0
TAR371G0953 Trochodendron aralioides HOM05D006978 ORTHO05D008723 1.8e-153 546.2 341 78.0
Thecc.02G200200 Theobroma cacao HOM05D006978 ORTHO05D008723 6.8e-153 544.3 338 78.4
CSS0048975 Camellia sinensis var. sinensis HOM05D006978 ORTHO05D008723 4.9e-151 538.1 341 76.5
RcHm_v2.0_Chr4g0429651 Rosa chinensis HOM05D006978 ORTHO05D008723 4.9e-151 538.1 338 77.5
Potri.003G167600 Populus trichocarpa HOM05D006978 ORTHO05D008723 1.6e-149 533.1 315 78.1
Sabra03G0122900 Salix brachista HOM05D006978 ORTHO05D008723 1.6e-149 533.1 341 73.9
TWI36G1146 Tripterygium wilfordii HOM05D006978 ORTHO05D008723 7.8e-149 530.8 340 76.5
GSVIVG01000920001 Vitis vinifera HOM05D006978 ORTHO05D008723 7.8e-149 530.8 302 82.5
FvH4_4g23290 Fragaria vesca HOM05D006978 ORTHO05D008723 1.0e-148 530.4 339 76.4
FAN07G2913 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.7e-148 529.6 338 76.6
Prupe.1G221700 Prunus persica HOM05D006978 ORTHO05D008723 3.0e-148 528.9 341 76.5
Duzib248G1034 Durio zibethinus HOM05D006978 ORTHO05D008723 1.5e-147 526.6 340 75.0
FAN17G0898 Fragaria x ananassa HOM05D006978 ORTHO05D008723 1.5e-147 526.6 338 76.0
PGR102G2599 Punica granatum HOM05D006978 ORTHO05D008723 2.5e-147 525.8 337 73.6
FAN12G0972 Fragaria x ananassa HOM05D006978 ORTHO05D008723 5.6e-147 524.6 339 75.8
Lj3A1073G42 Lonicera japonica HOM05D006978 ORTHO05D008723 2.8e-146 522.3 299 82.3
Nn3g16378 Nelumbo nucifera HOM05D006978 ORTHO05D008723 3.6e-146 521.9 344 72.7
Gorai.005G194100 Gossypium raimondii HOM05D006978 ORTHO05D008723 6.2e-146 521.2 310 79.7
Gohir.A03G149500 Gossypium hirsutum HOM05D006978 ORTHO05D008723 1.0e-145 520.4 310 79.4
Actinidia09621 Actinidia chinensis HOM05D006978 ORTHO05D008723 4.0e-145 518.5 335 74.9
Gohir.D02G172400 Gossypium hirsutum HOM05D006978 ORTHO05D008723 1.2e-144 516.9 310 79.0
PSO017G5946 Papaver somniferum HOM05D006978 ORTHO05D008723 2.6e-144 515.8 341 72.7
MD16G1123900 Malus domestica HOM05D006978 ORTHO05D008723 1.7e-143 513.1 317 77.9
PSO478G2402 Papaver somniferum HOM05D006978 ORTHO05D008723 1.1e-142 510.4 341 72.1
Cc11_g17300 Coffea canephora HOM05D006978 ORTHO05D008723 3.2e-142 508.8 305 77.7
HanXRQChr08g0210001 Helianthus annuus HOM05D006978 ORTHO05D008723 6.0e-141 504.6 319 74.3
CANSAT01G1132 Cannabis sativa HOM05D006978 ORTHO05D008723 1.7e-140 503.1 340 71.5
Eucgr.B03530 Eucalyptus grandis HOM05D006978 ORTHO05D008723 2.3e-140 502.7 340 71.5
Lj1g0015384 Lotus japonicus HOM05D006978 ORTHO05D008723 2.3e-140 502.7 334 73.1
CAN.G373.1 Capsicum annuum HOM05D006978 ORTHO05D008723 8.6e-140 500.7 285 79.6
TPR.G2900 Trifolium pratense HOM05D006978 ORTHO05D008723 1.9e-139 499.6 286 82.2
Medtr7g022480 Medicago truncatula HOM05D006978 ORTHO05D008723 3.3e-139 498.8 337 72.4
Nitab4.5_0004878g0040 Nicotiana tabacum HOM05D006978 ORTHO05D008723 7.3e-139 497.7 336 71.1
Nitab4.5_0001771g0130 Nicotiana tabacum HOM05D006978 ORTHO05D008723 9.5e-139 497.3 338 71.9
Aqoxy5G03257 Aquilegia oxysepala HOM05D006978 ORTHO05D008723 1.4e-137 493.4 308 74.0
Lalb_Chr10g0092011 Lupinus albus HOM05D006978 ORTHO05D008723 3.1e-137 492.3 332 72.0
VMungo1383G2882 Vigna mungo HOM05D000485 ORTHO05D000341 3.1e-137 492.3 323 74.6
Sopen01g005540 Solanum pennellii HOM05D006978 ORTHO05D008723 5.2e-137 491.5 336 70.5
EL10Ac6g13545 Beta vulgaris HOM05D006978 ORTHO05D008723 1.2e-136 490.3 301 75.1
AUR62005659 Chenopodium quinoa HOM05D006978 ORTHO05D008723 2.0e-136 489.6 288 78.5
Psat3g186920 Pisum sativum HOM05D006978 ORTHO05D008723 3.4e-136 488.8 337 72.1
Solyc01g009970.3 Solanum lycopersicum HOM05D006978 ORTHO05D008723 3.4e-136 488.8 300 76.0
Ca_07142_v3 Cicer arietinum L. HOM05D006978 ORTHO05D008723 4.4e-136 488.4 334 72.5
Migut.K01011 Erythranthe guttata HOM05D006978 ORTHO05D008723 4.4e-136 488.4 292 76.7
PGSC0003DMG400005222 Solanum tuberosum HOM05D006978 ORTHO05D008723 4.4e-136 488.4 284 78.5
AUR62028894 Chenopodium quinoa HOM05D006978 ORTHO05D008723 2.2e-135 486.1 288 77.4
Oeu011352.1 Olea europaea HOM05D006978 ORTHO05D008723 2.9e-135 485.7 286 78.7
ECA233G0335 Erigeron canadensis HOM05D006978 ORTHO05D008723 4.9e-135 485.0 285 79.3
Atru.BG.287.p Acer truncatum HOM05D006978 ORTHO05D008723 3.2e-134 482.3 271 83.0
CsaV3_4G002940 Cucumis sativus L. HOM05D006978 ORTHO05D008723 3.2e-134 482.3 346 69.7
ClCG07G015370 Citrullus lanatus HOM05D006978 ORTHO05D008723 5.4e-134 481.5 351 68.1
DCAR_031207 Daucus carota HOM05D006978 ORTHO05D008723 2.1e-133 479.6 313 70.3
MELO3C017748.2 Cucumis melo HOM05D006978 ORTHO05D008723 2.7e-133 479.2 353 68.0
arahy.Tifrunner.gnm1.ann1.2517Z7 Arachis hypogaea HOM05D006978 ORTHO05D008723 1.0e-132 477.2 336 70.5
arahy.Tifrunner.gnm1.ann1.HCE1UU Arachis hypogaea HOM05D006978 ORTHO05D008723 1.0e-132 477.2 336 70.5
Carub.0004s1713 Capsella rubella HOM05D006978 ORTHO05D008723 3.9e-132 475.3 310 72.6
CARHR129600 Cardamine hirsuta HOM05D006978 ORTHO05D008723 5.1e-132 474.9 308 74.0
AL4G31500 Arabidopsis lyrata HOM05D006978 ORTHO05D008723 7.3e-131 471.1 308 72.1
vmacro16091 Vaccinium macrocarpon HOM05D006978 ORTHO05D008723 1.6e-130 469.9 328 69.2
Thhalv10016892m.g Eutrema salsugineum HOM05D006978 ORTHO05D008723 2.1e-130 469.5 339 69.3
BcaB02g09429 Brassica carinata HOM05D006978 ORTHO05D008723 1.4e-129 466.8 343 66.8
BcaC02g11649 Brassica carinata HOM05D006978 ORTHO05D008723 3.1e-129 465.7 328 68.3
Sp4g17670 Schrenkiella parvula HOM05D006978 ORTHO05D008723 6.8e-129 464.5 309 72.2
AT2G35450 Arabidopsis thaliana HOM05D006978 ORTHO05D008723 1.2e-128 463.8 311 71.7
THA.LOC104814198 Tarenaya hassleriana HOM05D006978 ORTHO05D008723 4.4e-128 461.8 319 69.6
A05p10300 Brassica napus HOM05D006978 ORTHO05D008723 7.6e-128 461.1 309 71.8
BolC4t22921H Brassica oleracea HOM05D006978 ORTHO05D008723 9.9e-128 460.7 329 68.4
BraA05t19968Z Brassica rapa HOM05D006978 ORTHO05D008723 1.7e-127 459.9 312 71.5
C04p12730 Brassica napus HOM05D006978 ORTHO05D008723 8.4e-127 457.6 313 70.6
Aa31LG9G13360 Aethionema arabicum HOM05D006978 ORTHO05D008723 1.9e-126 456.4 324 68.8
Os04g0391900 Oryza sativa ssp. japonica HOM05D006978 ORTHO05D008723 1.9e-126 456.4 287 69.0
Glyma.18G285000 Glycine max HOM05D006978 ORTHO05D008723 7.8e-125 451.1 287 72.1
SalBow2G2397 Salvia bowleyana HOM05D006978 ORTHO05D008723 1.5e-123 446.8 321 67.0
Sc11g0000330 Simmondsia chinensis HOM05D006978 ORTHO05D008723 5.6e-123 444.9 283 70.7
Hund06110 Selenicereus undatus HOM05D006978 ORTHO05D008723 6.2e-122 441.4 304 70.7
Atru.chr11.2376 Acer truncatum HOM05D006978 ORTHO05D008723 1.6e-117 426.8 245 82.0
Peaxi162Scf00255g00025 Petunia axillaris HOM05D006978 ORTHO05D008723 3.5e-117 425.6 248 79.0
SEGI_15057 Sequoiadendron giganteum HOM05D006978 ORTHO05D008723 1.5e-115 420.2 328 61.0
Glyma.18G284800 Glycine max HOM05D006978 ORTHO05D008723 7.3e-115 417.9 250 78.0
Sed0026660 Sechium edule HOM05D006978 ORTHO05D008723 1.3e-114 417.2 285 69.8
Phvul.008G016700 Phaseolus vulgaris HOM05D006978 ORTHO05D008723 8.1e-114 414.5 244 79.9
Mapoly0133s0049 Marchantia polymorpha HOM05D006978 ORTHO05D008723 8.4e-111 404.4 320 58.8
ATR0582G006 Amborella trichopoda HOM05D006978 ORTHO05D008723 1.1e-107 394.0 248 72.6
Pp3c1_20610 Physcomitrium patens HOM05D006978 ORTHO05D008723 3.3e-107 392.5 300 61.7
Ah.02g130990 Amaranthus hybridus HOM05D006978 ORTHO05D008723 2.6e-104 382.9 304 62.8
CDE06G2364 Ceratophyllum demersum HOM05D006978 ORTHO05D008723 1.9e-102 376.7 333 56.8
SMO118G0021 Selaginella moellendorffii HOM05D006978 ORTHO05D008723 1.0e-100 370.9 290 58.6
Manes.13G007900 Manihot esculenta HOM05D006978 ORTHO05D008723 1.3e-98 364.0 254 71.3
AagrBONN_evm.TU.Sc2ySwM_117.2371 Anthoceros agrestis HOM05D006978 ORTHO05D008723 2.5e-94 349.7 288 58.3
Zm00001eb421220 Zea mays HOM05D006978 ORTHO05D008723 1.3e-84 317.4 195 72.3
MCO09G507 Micromonas commoda HOM05D006978 ORTHO05D008723 3.1e-73 279.6 308 49.0
MSTRG.476 Avicennia marina HOM05D006978 ORTHO05D008723 1.0e-71 274.6 169 75.7
Cpa.g.sc99.56 Carica papaya HOM05D006978 ORTHO05D008723 4.7e-61 239.2 144 77.1
Hma1.2p1_0065F.1_g034970 Hydrangea macrophylla HOM05D006978 ORTHO05D008723 9.4e-54 214.9 153 68.6
Glyma.02G096500 Glycine max HOM05D006978 ORTHO05D008723 4.0e-52 209.5 115 80.0
MBI11_g38268_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 2.4e-49 200.3 109 78.9
SalBow2G1646 Salvia bowleyana HOM05D006978 ORTHO05D008723 2.0e-43 180.6 105 79.0
PRCOL_00001136 Prasinoderma coloniale HOM05D006978 ORTHO05D008723 4.9e-42 176.0 282 37.9
MBI11_g38269_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 3.6e-37 159.8 111 67.6
Actinidia34017 Actinidia chinensis HOM05D006978 ORTHO05D008723 2.9e-34 150.2 156 52.6
Rhsim12G0096200 Rhododendron simsii HOM05D006978 ORTHO05D008723 1.4e-33 147.9 126 61.9
arahy.Tifrunner.gnm1.ann1.5L80US Arachis hypogaea HOM05D006978 ORTHO05D008723 2.6e-27 127.1 86 74.4
Cpa.g.sc99.55 Carica papaya HOM05D006978 ORTHO05D008723 1.9e-22 110.9 141 47.5
arahy.Tifrunner.gnm1.ann1.0RBU3Z Arachis hypogaea HOM05D006978 ORTHO05D008723 1.6e-16 91.3 55 74.5
Peaxi162Scf00255g00026 Petunia axillaris HOM05D006978 ORTHO05D008723 2.1e-16 90.9 96 54.2
MBI11_g31938_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 6.8e-12 75.9 49 71.4
RcHm_v2.0_Chr2g0135531 Rosa chinensis HOM05D006978 ORTHO05D008723 1.2e-11 75.1 40 77.5
MBI11_g31937_MAGBIO Magnolia biondii HOM05D006978 ORTHO05D008723 1.6e-08 64.7 42 66.7


User provided reference genes

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