Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009360 Carpinus fangiana HOM05D009398 ORTHO05D011511 7.6e-183 643.7 315 100.0
Haze_12403 Corylus avellana HOM05D009398 ORTHO05D011511 4.1e-128 461.8 287 79.4
Cfa009350 Carpinus fangiana HOM05D009398 ORTHO05D011511 6.5e-41 172.2 268 41.0
Haze_12354 Corylus avellana HOM05D009398 ORTHO05D011511 6.7e-38 162.2 261 40.2
Cfa008760 Carpinus fangiana HOM05D009398 ORTHO05D011511 7.4e-37 158.7 166 51.2
Haze_12327 Corylus avellana HOM05D009398 ORTHO05D011511 1.4e-35 154.5 235 41.7
Cfa009419 Carpinus fangiana HOM05D009398 ORTHO05D011511 2.0e-34 150.6 208 43.3
Haze_12398 Corylus avellana HOM05D009398 ORTHO05D011511 2.6e-34 150.2 214 44.4
Haze_12078 Corylus avellana HOM05D009398 ORTHO05D011511 4.2e-32 142.9 296 33.8
Cfa005300 Carpinus fangiana HOM05D009398 ORTHO05D011511 7.4e-29 132.1 199 41.2
Haze_12353 Corylus avellana HOM05D009398 ORTHO05D011511 2.9e-25 120.2 243 34.6
Cfa009423 Carpinus fangiana HOM05D009398 ORTHO05D011511 3.2e-24 116.7 220 33.2
Cfa009305 Carpinus fangiana HOM05D009398 ORTHO05D011511 4.2e-24 116.3 153 45.1
Cfa009056 Carpinus fangiana HOM05D009398 ORTHO05D011511 3.0e-22 110.2 230 37.4
QL03p062579 Quercus lobata HOM05D037156 ORTHO05D011511 5.5e-16 89.4 202 34.7
Cfa009296 Carpinus fangiana HOM05D009398 ORTHO05D011511 7.2e-16 89.0 166 37.3
Haze_12406 Corylus avellana HOM05D009398 ORTHO05D011511 1.2e-15 88.2 133 37.6
QL03p068339 Quercus lobata HOM05D009398 ORTHO05D011511 1.6e-15 87.8 246 31.3
QL03p065997 Quercus lobata HOM05D009398 ORTHO05D011511 3.0e-14 83.6 143 35.0
QL03p066121 Quercus lobata HOM05D009398 ORTHO05D011511 3.0e-14 83.6 143 35.0
Cfa009048 Carpinus fangiana HOM05D009398 ORTHO05D011511 8.8e-14 82.0 170 34.7
Prupe.6G093100 Prunus persica HOM05D000007 ORTHO05D009073 3.3e-13 80.1 196 31.6
QL03p066111 Quercus lobata HOM05D009398 ORTHO05D011511 3.3e-13 80.1 198 31.3
MD11G1124200 Malus domestica HOM05D000007 ORTHO05D009073 4.4e-13 79.7 231 27.3
MD03G1110700 Malus domestica HOM05D000007 ORTHO05D009073 3.7e-12 76.6 217 28.6
Cfa008807 Carpinus fangiana HOM05D009398 ORTHO05D011511 4.8e-12 76.3 238 26.1
Haze_11821 Corylus avellana HOM05D009398 ORTHO05D011511 6.3e-12 75.9 232 25.0
QL03p068470 Quercus lobata HOM05D009398 ORTHO05D011511 6.3e-12 75.9 200 28.0
FAN12G2506 Fragaria x ananassa HOM05D009792 ORTHO05D009073 1.1e-11 75.1 209 28.2
Haze_06690 Corylus avellana HOM05D001139 ORTHO05D000936 3.1e-11 73.6 51 62.7
FvH4_4g28520 Fragaria vesca HOM05D009792 ORTHO05D009073 3.1e-11 73.6 209 27.8
MD11G1124100 Malus domestica HOM05D000007 ORTHO05D009073 1.6e-10 71.2 175 27.4
Dinv16557 Davidia involucrata HOM05D000007 ORTHO05D009073 2.7e-10 70.5 234 26.9
Rhsim04G0086800 Rhododendron simsii HOM05D000171 ORTHO05D000101 5.9e-10 69.3 188 31.4
MD11G1124500 Malus domestica HOM05D009792 ORTHO05D009073 1.1e-08 65.1 249 25.7
Rhsim12G0109800 Rhododendron simsii HOM05D009398 ORTHO05D011511 1.9e-08 64.3 136 31.6
Rhsim04G0093700 Rhododendron simsii HOM05D000007 ORTHO05D009073 2.5e-08 63.9 188 29.3
RhsimUnG0048800 Rhododendron simsii HOM05D000171 ORTHO05D000101 2.5e-08 63.9 193 30.1
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 3.2e-08 63.5 146 30.8
Rhsim03G0071300 Rhododendron simsii HOM05D000171 ORTHO05D004496 3.2e-08 63.5 132 30.3
RcHm_v2.0_Chr4g0436521 Rosa chinensis HOM05D009792 ORTHO05D009073 5.5e-08 62.8 162 30.9
FvH4_4g07100 Fragaria vesca HOM05D000007 ORTHO05D009073 9.4e-08 62.0 159 30.2
HanXRQChr04g0095931 Helianthus annuus HOM05D000171 ORTHO05D009073 2.7e-07 60.5 220 23.6
PSO063G7627 Papaver somniferum HOM05D004049 ORTHO05D004496 3.6e-07 60.1 190 26.3
HanXRQChr04g0095821 Helianthus annuus HOM05D000171 ORTHO05D009073 4.7e-07 59.7 220 23.6
Rhsim08G0210600 Rhododendron simsii HOM05D000171 ORTHO05D000101 4.7e-07 59.7 130 30.0
Rhsim03G0071600 Rhododendron simsii HOM05D019855 ORTHO05D018548 8.0e-07 58.9 135 29.6
Thhalv10005397m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 1.4e-06 58.2 219 24.2
Actinidia30171 Actinidia chinensis HOM05D000007 ORTHO05D009073 1.8e-06 57.8 212 23.6
Thhalv10002973m.g Eutrema salsugineum HOM05D000171 ORTHO05D000101 4.0e-06 56.6 160 30.0
FAN16G0179 Fragaria x ananassa HOM05D000007 ORTHO05D009073 6.8e-06 55.8 176 24.4
HanXRQChr07g0189371 Helianthus annuus HOM05D000171 ORTHO05D009073 8.8e-06 55.5 218 25.7
Rhsim08G0197100 Rhododendron simsii HOM05D000171 ORTHO05D000101 8.8e-06 55.5 131 27.5


User provided reference genes

Program Settings