Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009350 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.0e-218 763.1 366 100.0
Haze_12398 Corylus avellana HOM05D009398 ORTHO05D011511 1.7e-109 400.2 351 63.8
Haze_12354 Corylus avellana HOM05D009398 ORTHO05D011511 1.9e-92 343.6 307 60.3
Cfa009357 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.8e-74 283.9 189 77.8
Haze_12403 Corylus avellana HOM05D009398 ORTHO05D011511 3.0e-66 256.5 450 42.7
Cfa009056 Carpinus fangiana HOM05D009398 ORTHO05D011511 5.9e-54 215.7 400 39.8
Cfa009419 Carpinus fangiana HOM05D009398 ORTHO05D011511 2.3e-53 213.8 321 44.5
Haze_12327 Corylus avellana HOM05D009398 ORTHO05D011511 6.1e-51 205.7 354 41.2
Cfa008760 Carpinus fangiana HOM05D009398 ORTHO05D011511 2.9e-48 196.8 400 38.8
Haze_12353 Corylus avellana HOM05D009398 ORTHO05D011511 7.8e-46 188.7 355 40.3
Cfa009423 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.2e-43 181.4 366 38.5
Cfa009305 Carpinus fangiana HOM05D009398 ORTHO05D011511 8.0e-43 178.7 348 39.7
Cfa009360 Carpinus fangiana HOM05D009398 ORTHO05D011511 3.4e-41 173.3 268 41.0
Haze_12406 Corylus avellana HOM05D009398 ORTHO05D011511 1.3e-40 171.4 306 38.6
Cfa005300 Carpinus fangiana HOM05D009398 ORTHO05D011511 6.4e-40 169.1 286 37.4
Haze_12078 Corylus avellana HOM05D009398 ORTHO05D011511 1.8e-34 151.0 308 40.3
Cfa009296 Carpinus fangiana HOM05D009398 ORTHO05D011511 3.0e-29 133.7 293 35.8
Cfa009048 Carpinus fangiana HOM05D009398 ORTHO05D011511 5.4e-23 112.8 287 35.2
MD03G1110700 Malus domestica HOM05D000007 ORTHO05D009073 8.6e-21 105.5 375 29.9
QL03p065997 Quercus lobata HOM05D009398 ORTHO05D011511 8.6e-21 105.5 331 27.8
QL03p066121 Quercus lobata HOM05D009398 ORTHO05D011511 8.6e-21 105.5 331 27.8
QL03p062579 Quercus lobata HOM05D037156 ORTHO05D011511 2.8e-19 100.5 368 27.7
FvH4_4g28520 Fragaria vesca HOM05D009792 ORTHO05D009073 8.1e-19 99.0 353 26.3
FAN12G2506 Fragaria x ananassa HOM05D009792 ORTHO05D009073 1.8e-18 97.8 353 26.1
FAN16G0179 Fragaria x ananassa HOM05D000007 ORTHO05D009073 2.4e-18 97.4 365 26.6
QL03p062572 Quercus lobata HOM05D009398 ORTHO05D011511 2.4e-18 97.4 311 28.6
MD11G1124200 Malus domestica HOM05D000007 ORTHO05D009073 3.4e-17 93.6 387 26.1
Prupe.6G093100 Prunus persica HOM05D000007 ORTHO05D009073 5.8e-17 92.8 351 28.2
RcHm_v2.0_Chr4g0436521 Rosa chinensis HOM05D009792 ORTHO05D009073 5.8e-17 92.8 354 27.4
Dinv27412 Davidia involucrata HOM05D006650 ORTHO05D008401 2.2e-16 90.9 322 26.4
QL03p066111 Quercus lobata HOM05D009398 ORTHO05D011511 1.4e-15 88.2 296 27.4
Cfa008807 Carpinus fangiana HOM05D009398 ORTHO05D011511 1.9e-15 87.8 353 24.9
Dinv16557 Davidia involucrata HOM05D000007 ORTHO05D009073 4.2e-15 86.7 351 27.6
QL03p068339 Quercus lobata HOM05D009398 ORTHO05D011511 4.2e-15 86.7 241 32.4
HanXRQChr07g0189371 Helianthus annuus HOM05D000171 ORTHO05D009073 5.4e-15 86.3 228 29.8
MD11G1124100 Malus domestica HOM05D000007 ORTHO05D009073 2.1e-14 84.3 396 26.8
Rhsim08G0197100 Rhododendron simsii HOM05D000171 ORTHO05D000101 2.1e-14 84.3 199 30.7
RhsimUnG0048800 Rhododendron simsii HOM05D000171 ORTHO05D000101 2.1e-14 84.3 207 34.8
Rhsim04G0086800 Rhododendron simsii HOM05D000171 ORTHO05D000101 6.0e-14 82.8 177 34.5
Prupe.1G333100 Prunus persica HOM05D000007 ORTHO05D009073 1.0e-13 82.0 345 24.9
PGR119G1533 Punica granatum HOM05D000171 ORTHO05D000101 1.7e-13 81.3 341 26.4
Haze_11821 Corylus avellana HOM05D009398 ORTHO05D011511 3.9e-13 80.1 357 25.2
QL03p062618 Quercus lobata HOM05D009398 ORTHO05D009073 3.9e-13 80.1 224 28.1
Eucgr.G02384 Eucalyptus grandis HOM05D000171 ORTHO05D000101 5.1e-13 79.7 354 26.8
QL03p068360 Quercus lobata HOM05D037156 ORTHO05D011511 5.1e-13 79.7 370 27.0
MD11G1124500 Malus domestica HOM05D009792 ORTHO05D009073 1.1e-12 78.6 207 29.0
FvH4_4g30181 Fragaria vesca HOM05D021789 ORTHO05D025345 1.5e-12 78.2 353 27.2
Rhsim03G0071300 Rhododendron simsii HOM05D000171 ORTHO05D004496 1.5e-12 78.2 223 29.1
Haze_06690 Corylus avellana HOM05D001139 ORTHO05D000936 1.9e-12 77.8 46 71.7
Rhsim04G0093700 Rhododendron simsii HOM05D000007 ORTHO05D009073 2.5e-12 77.4 205 31.7
EL10As6g23636 Beta vulgaris HOM05D000007 ORTHO05D000017 3.3e-12 77.0 182 29.7
FAN12G1824 Fragaria x ananassa HOM05D021789 ORTHO05D025345 4.3e-12 76.6 353 27.2
RcHm_v2.0_Chr4g0399251 Rosa chinensis HOM05D000007 ORTHO05D009073 1.3e-11 75.1 299 29.1
Rhsim08G0210600 Rhododendron simsii HOM05D000171 ORTHO05D000101 1.6e-11 74.7 177 30.5
CARHR186290 Cardamine hirsuta HOM05D000171 ORTHO05D000101 4.8e-11 73.2 325 21.8
HanXRQChr05g0137821 Helianthus annuus HOM05D000171 ORTHO05D009073 4.8e-11 73.2 232 26.7
CSS0002420 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 1.8e-10 71.2 231 25.1
CSS0024527 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 1.8e-10 71.2 231 25.1
Actinidia30171 Actinidia chinensis HOM05D000007 ORTHO05D009073 2.4e-10 70.9 247 25.9
Eucgr.B03075 Eucalyptus grandis HOM05D000171 ORTHO05D000101 3.1e-10 70.5 256 27.7
MD16G1019000 Malus domestica HOM05D000007 ORTHO05D009073 3.1e-10 70.5 375 25.9
Manes.02G006040 Manihot esculenta HOM05D000171 ORTHO05D000101 4.0e-10 70.1 180 27.2
RcHm_v2.0_Chr2g0138411 Rosa chinensis HOM05D000007 ORTHO05D022672 5.3e-10 69.7 323 26.0
FAN17G1885 Fragaria x ananassa HOM05D006060 ORTHO05D007268 6.9e-10 69.3 249 27.7
FvH4_4g07100 Fragaria vesca HOM05D000007 ORTHO05D009073 9.0e-10 68.9 252 24.2
HanXRQChr02g0048011 Helianthus annuus HOM05D000171 ORTHO05D009073 9.0e-10 68.9 395 23.0
HanXRQChr04g0095931 Helianthus annuus HOM05D000171 ORTHO05D009073 9.0e-10 68.9 338 24.6
FAN22G1852 Fragaria x ananassa HOM05D021789 ORTHO05D025345 1.2e-09 68.6 199 30.2
Ciclev10030374m.g Citrus clementina HOM05D003981 ORTHO05D003666 2.0e-09 67.8 157 26.1
ECA232G4304 Erigeron canadensis HOM05D000171 ORTHO05D009073 2.0e-09 67.8 353 23.2
TAR626G1746 Trochodendron aralioides HOM05D000007 ORTHO05D000521 3.4e-09 67.0 276 25.0
AUR62012551 Chenopodium quinoa HOM05D000007 ORTHO05D000017 4.5e-09 66.6 176 26.7
BraA09t38949Z Brassica rapa HOM05D000171 ORTHO05D000101 5.8e-09 66.2 341 21.7
Duzib150G0415 Durio zibethinus HOM05D009398 ORTHO05D009073 5.8e-09 66.2 218 29.4
HanXRQChr04g0095821 Helianthus annuus HOM05D000171 ORTHO05D009073 5.8e-09 66.2 224 27.7
Rhsim12G0109800 Rhododendron simsii HOM05D009398 ORTHO05D011511 9.9e-09 65.5 173 30.6
FAN22G0536 Fragaria x ananassa HOM05D009792 ORTHO05D009073 1.7e-08 64.7 246 26.4
HanXRQChr02g0049881 Helianthus annuus HOM05D000007 ORTHO05D009073 1.7e-08 64.7 247 25.1
TAR374G0551 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.7e-08 64.7 321 23.7
MD13G1020600 Malus domestica HOM05D000007 ORTHO05D009073 2.2e-08 64.3 323 24.8
PSO732G0080 Papaver somniferum HOM05D004049 ORTHO05D004496 2.9e-08 63.9 233 26.2
CSS0043495 Camellia sinensis var. sinensis HOM05D000171 ORTHO05D000101 6.4e-08 62.8 238 27.3
Prupe.1G300900 Prunus persica HOM05D015152 ORTHO05D009073 6.4e-08 62.8 275 25.1
CSS0046872 Camellia sinensis var. sinensis HOM05D000171 ORTHO05D009073 8.4e-08 62.4 238 27.3
Rhsim06G0172500 Rhododendron simsii HOM05D000007 ORTHO05D000521 8.4e-08 62.4 182 27.5
Atru.chr13.1253 Acer truncatum HOM05D000007 ORTHO05D000017 1.1e-07 62.0 197 26.4
BraA07t27916Z Brassica rapa HOM05D000171 ORTHO05D000101 1.1e-07 62.0 285 23.2
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.1e-07 62.0 257 25.7
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.1e-07 62.0 255 26.3
HanXRQChr05g0146481 Helianthus annuus HOM05D000171 ORTHO05D009073 1.4e-07 61.6 213 27.7
ClCG01G007450 Citrullus lanatus HOM05D000171 ORTHO05D009073 1.9e-07 61.2 197 27.9
FAN07G2784 Fragaria x ananassa HOM05D021789 ORTHO05D009073 1.9e-07 61.2 220 25.9
HanXRQChr02g0047271 Helianthus annuus HOM05D000171 ORTHO05D009073 1.9e-07 61.2 344 25.9
BcaC01g04937 Brassica carinata HOM05D000171 ORTHO05D000101 2.4e-07 60.8 206 24.3
A03p26650 Brassica napus HOM05D000171 ORTHO05D000101 2.4e-07 60.8 206 24.3
C03p31920 Brassica napus HOM05D000171 ORTHO05D000101 2.4e-07 60.8 206 24.3
BolC3t15534H Brassica oleracea HOM05D000171 ORTHO05D000101 2.4e-07 60.8 206 24.3
MD02G1067600 Malus domestica HOM05D009792 ORTHO05D009073 2.4e-07 60.8 296 27.4
A09p34040 Brassica napus HOM05D000171 ORTHO05D000101 3.2e-07 60.5 341 21.1
CARHR220790 Cardamine hirsuta HOM05D000171 ORTHO05D000101 3.2e-07 60.5 265 24.9
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.2e-07 60.5 257 25.7
BraA03t11876Z Brassica rapa HOM05D000171 ORTHO05D000101 4.2e-07 60.1 206 24.3
PSO384G2241 Papaver somniferum HOM05D004049 ORTHO05D004496 4.2e-07 60.1 233 25.8
TAR371G0392 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.2e-07 60.1 264 25.8
PGR142G3495 Punica granatum HOM05D000171 ORTHO05D000101 5.4e-07 59.7 235 25.5
Carub.0001s4019 Capsella rubella HOM05D000171 ORTHO05D000101 7.1e-07 59.3 296 23.0
HanXRQChr05g0146491 Helianthus annuus HOM05D000171 ORTHO05D009073 7.1e-07 59.3 206 25.7
A05p25180 Brassica napus HOM05D000171 ORTHO05D000101 9.3e-07 58.9 208 25.0
FvH4_7g33810 Fragaria vesca HOM05D000007 ORTHO05D009073 1.2e-06 58.5 174 28.2
TAR371G0647 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.2e-06 58.5 200 27.5
Aqoxy2G00817 Aquilegia oxysepala HOM05D000007 ORTHO05D000676 1.6e-06 58.2 156 29.5
Duzib205G1409 Durio zibethinus HOM05D000171 ORTHO05D000101 1.6e-06 58.2 117 31.6
PSO541G0842 Papaver somniferum HOM05D004049 ORTHO05D004496 1.6e-06 58.2 184 26.6
Potri.008G144000 Populus trichocarpa HOM05D000171 ORTHO05D010908 1.6e-06 58.2 162 31.5
BraA05t21397Z Brassica rapa HOM05D000171 ORTHO05D000101 2.1e-06 57.8 211 24.6
Dinv36193 Davidia involucrata HOM05D003981 ORTHO05D003666 2.1e-06 57.8 129 29.5
Prupe.1G285500 Prunus persica HOM05D000007 ORTHO05D009073 2.1e-06 57.8 236 25.8
Sp1g34800 Schrenkiella parvula HOM05D000171 ORTHO05D000101 2.1e-06 57.8 241 24.1
Migut.F01560 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.7e-06 57.4 160 29.4
Migut.F01563 Erythranthe guttata HOM05D000007 ORTHO05D000017 2.7e-06 57.4 206 27.2
FAN01G1574 Fragaria x ananassa HOM05D000007 ORTHO05D009073 3.5e-06 57.0 170 28.2
HanXRQChr02g0048031 Helianthus annuus HOM05D000171 ORTHO05D009073 3.5e-06 57.0 216 25.5
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.5e-06 57.0 128 33.6
AL2G17240 Arabidopsis lyrata HOM05D000171 ORTHO05D000101 4.6e-06 56.6 294 24.1
PSO210G5713 Papaver somniferum HOM05D004049 ORTHO05D004496 4.6e-06 56.6 234 25.6
Rhsim03G0071600 Rhododendron simsii HOM05D019855 ORTHO05D018548 4.6e-06 56.6 144 30.6
HanXRQChr05g0147631 Helianthus annuus HOM05D000007 ORTHO05D009073 6.0e-06 56.2 229 24.0
Rhsim03G0071900 Rhododendron simsii HOM05D000007 ORTHO05D009073 6.0e-06 56.2 174 28.2
FAN07G2472 Fragaria x ananassa HOM05D009792 ORTHO05D009073 7.9e-06 55.8 246 25.2


User provided reference genes

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