Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cfa009335 Carpinus fangiana HOM05D008446 ORTHO05D010616 7.4e-54 213.8 120 100.0
Cfa005827 Carpinus fangiana HOM05D008446 ORTHO05D010616 2.0e-51 205.7 120 95.8
Haze_12388 Corylus avellana HOM05D008446 ORTHO05D010616 6.1e-48 194.1 135 83.7
CiPaw.05G112300 Carya illinoinensis HOM05D008446 ORTHO05D010616 1.4e-31 139.8 120 59.2
Ciclev10033355m.g Citrus clementina HOM05D008446 ORTHO05D010616 9.7e-30 133.7 120 54.2
Duzib248G0886 Durio zibethinus HOM05D008446 ORTHO05D010616 3.7e-29 131.7 112 58.9
Thecc.02G277000 Theobroma cacao HOM05D008446 ORTHO05D010616 1.7e-26 122.9 108 55.6
Actinidia30659 Actinidia chinensis HOM05D008446 ORTHO05D010616 5.0e-26 121.3 116 51.7
FvH4_3g28341 Fragaria vesca HOM05D008446 ORTHO05D010616 1.1e-25 120.2 121 54.5
Atru.chr11.2297 Acer truncatum HOM05D008446 ORTHO05D010616 1.9e-25 119.4 125 50.4
Cc02_g37700 Coffea canephora HOM05D008446 ORTHO05D010616 1.2e-24 116.7 116 54.3
Potri.010G058400 Populus trichocarpa HOM05D008446 ORTHO05D010616 1.2e-24 116.7 122 50.8
Dinv14820 Davidia involucrata HOM05D008446 ORTHO05D010616 1.6e-24 116.3 109 53.2
Prupe.4G256400 Prunus persica HOM05D008446 ORTHO05D010616 3.6e-24 115.2 113 53.1
COL.COLO4_20356 Corchorus olitorius HOM05D008446 ORTHO05D010616 1.4e-23 113.2 111 54.1
PGSC0003DMG400000024 Solanum tuberosum HOM05D008446 ORTHO05D010616 1.8e-23 112.8 122 49.2
Nitab4.5_0009210g0010 Nicotiana tabacum HOM05D008446 ORTHO05D010616 8.8e-23 110.5 123 49.6
Gohir.A03G127200 Gossypium hirsutum HOM05D008446 ORTHO05D010616 5.7e-22 107.8 113 49.6
Hma1.2p1_0316F.1_g122850 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 5.7e-22 107.8 115 47.8
MD03G1170500 Malus domestica HOM05D008446 ORTHO05D010616 5.7e-22 107.8 124 50.8
Migut.B01727 Erythranthe guttata HOM05D008446 ORTHO05D010616 9.7e-22 107.1 113 47.8
CAN.G78.51 Capsicum annuum HOM05D008446 ORTHO05D010616 1.3e-21 106.7 122 47.5
Gohir.D02G150600 Gossypium hirsutum HOM05D008446 ORTHO05D010616 2.2e-21 105.9 113 48.7
Nitab4.5_0002160g0020 Nicotiana tabacum HOM05D008446 ORTHO05D010616 2.8e-21 105.5 123 48.0
Gorai.005G168900 Gossypium raimondii HOM05D008446 ORTHO05D010616 4.8e-21 104.8 113 48.7
CiPaw.06G101000 Carya illinoinensis HOM05D008446 ORTHO05D010616 1.4e-20 103.2 123 43.9
Oeu053291.1 Olea europaea HOM05D008446 ORTHO05D010616 1.4e-20 103.2 115 47.0
Hma1.2p1_0275F.1_g110860 Hydrangea macrophylla HOM05D008446 ORTHO05D010616 4.1e-20 101.7 121 47.1
Manes.13G017900 Manihot esculenta HOM05D008446 ORTHO05D010616 1.2e-19 100.1 120 43.3
Gohir.D01G155080 Gossypium hirsutum HOM05D008446 ORTHO05D010616 1.6e-19 99.8 110 48.2
Aqoxy3G01500 Aquilegia oxysepala HOM05D008446 ORTHO05D010616 3.8e-18 95.1 124 44.4
Oeu056349.1 Olea europaea HOM05D008446 ORTHO05D010616 1.1e-17 93.6 113 44.2
DCAR_007008 Daucus carota HOM05D004390 ORTHO05D004950 1.9e-17 92.8 108 44.4
FAN21G1469 Fragaria x ananassa HOM05D008446 ORTHO05D010616 1.9e-17 92.8 98 51.0
Oeu014670.1 Olea europaea HOM05D008446 ORTHO05D010616 4.2e-17 91.7 113 42.5
SGA_v2.0_scaffold95G28851 Striga asiatica HOM05D008446 ORTHO05D010616 1.6e-16 89.7 115 41.7
Potri.008G176700 Populus trichocarpa HOM05D008446 ORTHO05D010616 2.1e-16 89.4 158 33.5
Gorai.002G192100 Gossypium raimondii HOM05D008446 ORTHO05D010616 2.7e-16 89.0 100 48.0
FAN16G2376 Fragaria x ananassa HOM05D008446 ORTHO05D010616 6.1e-16 87.8 95 50.5
HanXRQChr08g0207651 Helianthus annuus HOM05D008446 ORTHO05D010616 8.0e-16 87.4 125 36.0
FAN11G2359 Fragaria x ananassa HOM05D008446 ORTHO05D010616 1.4e-15 86.7 97 51.5
Sabra10G0047100 Salix brachista HOM05D008446 ORTHO05D010616 3.0e-15 85.5 100 48.0
Sabra08G0134500 Salix brachista HOM05D008446 ORTHO05D010616 1.5e-14 83.2 98 43.9
ATR0605G179 Amborella trichopoda HOM05D008446 ORTHO05D010616 2.0e-14 82.8 113 38.1
HanXRQChr12g0372331 Helianthus annuus HOM05D008446 ORTHO05D010616 2.0e-14 82.8 107 42.1
Oeu004522.1 Olea europaea HOM05D008446 ORTHO05D010616 3.4e-14 82.0 113 39.8
Rhsim12G0028100 Rhododendron simsii HOM05D008446 ORTHO05D010616 2.8e-13 79.0 112 40.2
HPP92_019664 Vanilla planifolia HOM05D008446 ORTHO05D010616 8.3e-13 77.4 115 36.5
TAR376G1198 Trochodendron aralioides HOM05D008446 ORTHO05D010616 1.1e-12 77.0 114 39.5
MBI01_g31983_MAGBIO Magnolia biondii HOM05D008446 ORTHO05D010616 2.3e-10 69.3 123 40.7
Nn6g31552 Nelumbo nucifera HOM05D008446 ORTHO05D010616 3.8e-10 68.6 110 37.3
ECA233G4326 Erigeron canadensis HOM05D008446 ORTHO05D010616 4.2e-09 65.1 125 34.4
CDE07G0801 Ceratophyllum demersum HOM05D008006 ORTHO05D010181 4.7e-08 61.6 44 65.9
Sabra08G0134300 Salix brachista HOM05D008446 ORTHO05D010616 6.8e-07 57.8 87 40.2
Zm00001eb382010 Zea mays HOM05D008446 ORTHO05D010616 6.8e-07 57.8 93 41.9


User provided reference genes

Program Settings